CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
plastid 3
peroxisome 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome, plastid
BaCelLo:	cytosol
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	plastid

peroxisome: 19073762
nucleus: 21132161

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

msms PMID: 19073762 doi

Y Arai, M Hayashi, M Nishimura

Department of Cell Biology, National Institute for Basic Biology, Okazaki 444-8585 Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49397	Soybean	endoplasmic reticulum	82.15	89.08
KRH00268	Soybean	peroxisome	85.35	85.94
Solyc10g085200.1.1	Tomato	peroxisome	80.09	83.93
VIT_08s0105g00460.t01	Wine grape	peroxisome	82.84	81.17
PGSC0003DMT400049359	Potato	peroxisome	81.01	80.64
PGSC0003DMT400028641	Potato	cytosol, mitochondrion, peroxisome	80.55	80.18
Solyc10g076600.1.1	Tomato	peroxisome	80.32	79.95
AT3G51840.1	Thale cress	peroxisome	79.63	79.82
GSMUA_Achr8P21130_001	Banana	peroxisome	78.03	78.21
CDX78043	Canola	peroxisome	78.26	77.9
CDX73688	Canola	peroxisome	78.26	77.9
Bra006879.1-P	Field mustard	peroxisome	78.26	77.9
CDY23164	Canola	peroxisome	77.8	77.45
CDX95301	Canola	peroxisome	77.57	77.22
Os01t0159400-01	Rice	nucleus	74.83	75.52
Os05t0163700-01	Rice	cytosol, mitochondrion, peroxisome	73.91	75.12
TraesCS1A01G110300.1	Wheat	peroxisome	74.83	74.83
EES17775	Sorghum	cytosol, mitochondrion, peroxisome	74.14	74.83
TraesCS1D01G111900.1	Wheat	golgi, nucleus, plastid, unclear	74.6	74.6
TraesCS1B01G129300.1	Wheat	peroxisome	74.6	74.6
Zm00001d037521_P002	Maize	peroxisome	73.91	73.41
OQU86270	Sorghum	peroxisome	73.23	73.23
Zm00001d039768_P003	Maize	mitochondrion	73.46	71.18
OQU77505	Sorghum	peroxisome	71.17	71.17
HORVU1Hr1G024240.1	Barley	mitochondrion, peroxisome, plastid	74.83	69.13
KRH75651	Soybean	extracellular	12.81	39.16
KRH24916	Soybean	mitochondrion	24.49	26.16
KRG89023	Soybean	mitochondrion	24.49	26.1
KRH12085	Soybean	nucleus	12.59	6.64
KRH37066	Soybean	endoplasmic reticulum, nucleus	10.53	6.05

Protein Annotations

Gene3D:1.10.540.10	Gene3D:1.20.140.10	EntrezGene:100125585	Gene3D:2.40.110.10	MapMan:5.7.3.2.1	UniProt:A0A0R0KF64
EMBL:ACUP02001469	InterPro:Acyl-CoA_DH_CS	InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom
InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C	EnsemblPlantsGene:GLYMA_03G056400	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003995	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016627
GO:GO:0050660	GO:GO:0055114	InterPro:IPR037069	EnsemblPlants:KRH65710	ProteinID:KRH65710	ProteinID:KRH65710.1
PFAM:PF00441	PFAM:PF02770	PFAM:PF02771	ScanProsite:PS00073	PANTHER:PTHR43188	PANTHER:PTHR43188:SF1
SUPFAM:SSF47203	SUPFAM:SSF56645	UniParc:UPI0006EDCE87	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:7762789..7767440

Molecular Weight (calculated)

47755.0 Da

IEP (calculated)

8.592

GRAVY (calculated)

0.034

Length

437 amino acids

Sequence
(BLAST)

001: MAINSSKNPD GSVQNAMPSY FYSPPLDVSA AFPQATPAST FPPCASDYFQ LDNLLTTEEQ AIRKKVRECM EKEIAPIMTE YWEKAKFPFH VIPKLGALRI
101: AGGTIKDYGC PGLSITGSAI AVAEVARVDA SCSTFILVHS SLAMLTIALC GSEAQKQKYL PSLAQLQTVA CWALTEPDYG SDASALKTTA TKVEGGWILE
201: GQKRWIGNST FADVLVVFAR NASTNQINGF IIKKDAPGLT VTKIENKIGL RIVQNGDIVM RKVFVPDEDR IAGVNSFQDT NKVLAVSRVM VAWQPIGISM
301: GIYDMCHRYL MERKQFGAPL AAFQISQQKL VQMLGNIQAM ILVGWRLCKL YESGKMTPGQ ASLGKSWITL RARETAALGR ELLGGNGILA DFLVAKAFCD
401: LEPIYTYEGT YDINTLVTGR EVTGFASFKP VAQRSRL

Best Arabidopsis Sequence Match ( AT3G51840.1 )
(BLAST)

001: MAVLSSADRA SNEKKVKSSY FDLPPMEMSV AFPQATPAST FPPCTSDYYH FNDLLTPEEQ AIRKKVRECM EKEVAPIMTE YWEKAEFPFH ITPKLGAMGV
101: AGGSIKGYGC PGLSITANAI ATAEIARVDA SCSTFILVHS SLGMLTIALC GSEAQKEKYL PSLAQLNTVA CWALTEPDNG SDASGLGTTA TKVEGGWKIN
201: GQKRWIGNST FADLLIIFAR NTTTNQINGF IVKKDAPGLK ATKIPNKIGL RMVQNGDILL QNVFVPDEDR LPGVNSFQDT SKVLAVSRVM VAWQPIGISM
301: GIYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLGNVQAM FLMGWRLCKL YETGQMTPGQ ASLGKAWISS KARETASLGR ELLGGNGILA DFLVAKAFCD
401: LEPIYTYEGT YDINTLVTGR EVTGIASFKP ATRSRL

Arabidopsis Description

ACX4Acyl-coenzyme A oxidase 4, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q96329]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.