Factsheet for TraesCS1A01G110300.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	peroxisome
Any Predictor:	peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G111900.1	Wheat	golgi, nucleus, plastid, unclear	95.88	95.88
TraesCS1B01G129300.1	Wheat	peroxisome	95.88	95.88
EES17775	Sorghum	cytosol, mitochondrion, peroxisome	89.02	89.84
Os05t0163700-01	Rice	cytosol, mitochondrion, peroxisome	87.87	89.3
HORVU1Hr1G024240.1	Barley	mitochondrion, peroxisome, plastid	95.65	88.37
Zm00001d037521_P002	Maize	peroxisome	88.33	87.73
OQU77505	Sorghum	peroxisome	84.67	84.67
GSMUA_Achr8P21130_001	Banana	peroxisome	78.49	78.67
Solyc10g085200.1.1	Tomato	peroxisome	73.46	76.98
VIT_08s0105g00460.t01	Wine grape	peroxisome	78.26	76.68
KRH49397	Soybean	endoplasmic reticulum	69.79	75.68
AT3G51840.1	Thale cress	peroxisome	74.83	75.0
KRH65710	Soybean	peroxisome	74.83	74.83
PGSC0003DMT400049359	Potato	peroxisome	74.37	74.03
KRH00268	Soybean	peroxisome	73.46	73.96
Solyc10g076600.1.1	Tomato	peroxisome	73.91	73.58
CDX73688	Canola	peroxisome	73.46	73.12
PGSC0003DMT400028641	Potato	cytosol, mitochondrion, peroxisome	73.46	73.12
Bra006879.1-P	Field mustard	peroxisome	73.23	72.89
CDX78043	Canola	peroxisome	73.23	72.89
CDX95301	Canola	peroxisome	72.77	72.44
CDY23164	Canola	peroxisome	72.54	72.21
KRH75651	Soybean	extracellular	11.9	36.36
CDY64742	Canola	cytosol, mitochondrion, plastid	13.5	34.1
CDY59727	Canola	extracellular, peroxisome, plastid	9.84	33.59
Bra010066.1-P	Field mustard	cytosol, peroxisome, plasma membrane	11.44	29.59
CDX73320	Canola	plastid	13.73	25.0
TraesCS1A01G066800.2	Wheat	mitochondrion	22.65	24.26
CDY59726	Canola	cytosol	1.83	9.3
TraesCS2A01G109700.1	Wheat	golgi	12.81	6.72

Protein Annotations

Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:5.7.3.2.1	InterPro:Acyl-CoA_DH_CS	InterPro:Acyl-CoA_Oxase/DH_cen-dom
InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0003995	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	InterPro:IPR037069	PFAM:PF00441	PFAM:PF02770
PFAM:PF02771	ScanProsite:PS00073	PANTHER:PTHR43188	PANTHER:PTHR43188:SF1	SUPFAM:SSF47203	SUPFAM:SSF56645
EnsemblPlantsGene:TraesCS1A01G110300	EnsemblPlants:TraesCS1A01G110300.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1A:-:109982664..109986523

Molecular Weight (calculated)

46995.1 Da

IEP (calculated)

9.367

GRAVY (calculated)

0.002

Length

437 amino acids

Sequence
(BLAST)

001: MGSLRXXSGG EGRNEDGGKV GLPALEVALA FPQATPASLF PPAVSDYYQL DDLLTGEEKA LRKKVRAISE KEIAPIMTEY WEKAEFPFHA IPKLATLGLA
101: GSTTKGYGCP GLSLTASAVS IAEVARVDAS CSTFILVHSS LAMSTIALCG SEAQKQKYLP SLAQFKTVGC WALTEPDYGS DASSLKTSAI KVPGGWQLDG
201: QKRWIGNSTF ADVLVILARN ADTKQLNGFI VKKGAPGLRA TKIQNKIGLR MVQNGDILLN KVFVPEEDRL TGINSFQDIS KVLAMSRIMV AWQPIGISMG
301: VYDMCHRYLK ERKQFGAPLA AFQLNQEKLV RMLGNIQAML LVGWRLCKLY ESGKMTPGHA SLGKAWTSSK SREVVSLGRE LLGGNGILAD FLVAKAFCDL
401: EPIYSYEGTY DINSLVTGRE ITGIASFKPA AVAKSRL

Best Arabidopsis Sequence Match ( AT3G51840.1 )
(BLAST)

001: MAVLSSADRA SNEKKVKSSY FDLPPMEMSV AFPQATPAST FPPCTSDYYH FNDLLTPEEQ AIRKKVRECM EKEVAPIMTE YWEKAEFPFH ITPKLGAMGV
101: AGGSIKGYGC PGLSITANAI ATAEIARVDA SCSTFILVHS SLGMLTIALC GSEAQKEKYL PSLAQLNTVA CWALTEPDNG SDASGLGTTA TKVEGGWKIN
201: GQKRWIGNST FADLLIIFAR NTTTNQINGF IVKKDAPGLK ATKIPNKIGL RMVQNGDILL QNVFVPDEDR LPGVNSFQDT SKVLAVSRVM VAWQPIGISM
301: GIYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLGNVQAM FLMGWRLCKL YETGQMTPGQ ASLGKAWISS KARETASLGR ELLGGNGILA DFLVAKAFCD
401: LEPIYTYEGT YDINTLVTGR EVTGIASFKP ATRSRL

Arabidopsis Description

ACX4Acyl-coenzyme A oxidase 4, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q96329]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.