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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • peroxisome 2
  • mitochondrion 1
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:peroxisome
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY64742 Canola cytosol, mitochondrion, plastid 57.4 56.07
Bra006879.1-P Field mustard peroxisome 50.89 19.59
OQU86270 Sorghum peroxisome 33.73 13.04
OQU77505 Sorghum peroxisome 31.36 12.13
Zm00001d037521_P002 Maize peroxisome 31.36 12.05
EES17775 Sorghum cytosol, mitochondrion, peroxisome 30.77 12.01
Zm00001d039768_P003 Maize mitochondrion 31.95 11.97
GSMUA_Achr8P21130_001 Banana peroxisome 30.77 11.93
Os05t0163700-01 Rice cytosol, mitochondrion, peroxisome 30.18 11.86
Os01t0159400-01 Rice nucleus 30.18 11.78
TraesCS1A01G110300.1 Wheat peroxisome 29.59 11.44
TraesCS1B01G129300.1 Wheat peroxisome 29.59 11.44
TraesCS1D01G111900.1 Wheat golgi, nucleus, plastid, unclear 29.59 11.44
HORVU1Hr1G024240.1 Barley mitochondrion, peroxisome, plastid 29.59 10.57
Bra038291.1-P Field mustard mitochondrion 11.24 4.65
Bra029606.1-P Field mustard cytosol 10.06 2.07
Protein Annotations
EnsemblPlants:Bra010066.1EnsemblPlants:Bra010066.1-PEnsemblPlantsGene:Bra010066GO:GO:0005575GO:GO:0016020GO:GO:0016021
PANTHER:PTHR43188SEG:segTMHMM:TMhelixUniParc:UPI000253F678UniProt:M4D0R7MapMan:35.1
Description
AT3G51840 (E=8e-032) ACX4, ATSCX, ATG6 | ACX4 (ACYL-COA OXIDASE 4); acyl-CoA oxidase/ oxidoreductase
Coordinates
chrA06:+:19131936..19133146
Molecular Weight (calculated)
19057.4 Da
IEP (calculated)
8.083
GRAVY (calculated)
0.110
Length
169 amino acids
Sequence
(BLAST)
001: MTVLSSTDRD NAEKKVKSSY FDLPAMNVFV AFPQATPASK FPTCTSDYYH FSELLTPEEQ AVRKSEGVHG ERSCPHYDRE FPFHIIPKLG ALGVVGGSIK
101: VMAVLATSQP MPLQQQRYLE LMQAVGLLIW SLAWRRLWSS LALEKLLELK LLMGGACPWI LFLHMFIVP
Best Arabidopsis Sequence Match ( AT3G51840.1 )
(BLAST)
001: MAVLSSADRA SNEKKVKSSY FDLPPMEMSV AFPQATPAST FPPCTSDYYH FNDLLTPEEQ AIRKKVRECM EKEVAPIMTE YWEKAEFPFH ITPKLGAMGV
101: AGGSIKGYGC PGLSITANAI ATAEIARVDA SCSTFILVHS SLGMLTIALC GSEAQKEKYL PSLAQLNTVA CWALTEPDNG SDASGLGTTA TKVEGGWKIN
201: GQKRWIGNST FADLLIIFAR NTTTNQINGF IVKKDAPGLK ATKIPNKIGL RMVQNGDILL QNVFVPDEDR LPGVNSFQDT SKVLAVSRVM VAWQPIGISM
301: GIYDMCHRYL KERKQFGAPL AAFQLNQQKL VQMLGNVQAM FLMGWRLCKL YETGQMTPGQ ASLGKAWISS KARETASLGR ELLGGNGILA DFLVAKAFCD
401: LEPIYTYEGT YDINTLVTGR EVTGIASFKP ATRSRL
Arabidopsis Description
ACX4Acyl-coenzyme A oxidase 4, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q96329]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.