Factsheet for Bra038291.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53838	Canola	mitochondrion	96.82	96.82
AT3G45300.1	Thale cress	mitochondrion	93.4	93.4
VIT_06s0004g03140.t01	Wine grape	mitochondrion	83.62	84.65
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	95.11	83.84
KRH24916	Soybean	mitochondrion	83.37	83.37
Os05t0125500-01	Rice	mitochondrion	82.4	82.4
GSMUA_Achr6P08800_001	Banana	mitochondrion	81.66	81.66
Zm00001d035475_P001	Maize	mitochondrion	77.75	81.54
KRG89023	Soybean	mitochondrion	81.66	81.46
HORVU1Hr1G013820.4	Barley	mitochondrion	77.75	80.71
PGSC0003DMT400020955	Potato	mitochondrion	80.93	80.34
Solyc11g069180.1.1	Tomato	plastid	80.68	80.1
PGSC0003DMT400069152	Potato	mitochondrion	80.44	79.85
TraesCS1A01G066800.2	Wheat	mitochondrion	79.22	79.41
Solyc06g073560.2.1	Tomato	mitochondrion	79.95	79.37
TraesCS1B01G085100.1	Wheat	mitochondrion	78.97	79.17
EES18942	Sorghum	mitochondrion	72.37	79.14
TraesCS1D01G067800.2	Wheat	mitochondrion	79.46	78.5
Zm00001d010970_P003	Maize	cytosol, peroxisome, plasma membrane	79.71	58.32
Bra006879.1-P	Field mustard	peroxisome	23.96	22.32
Bra010066.1-P	Field mustard	cytosol, peroxisome, plasma membrane	4.65	11.24
Bra029606.1-P	Field mustard	cytosol	18.83	9.39

Protein Annotations

KEGG:00280+1.3.8.4	Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:4.2.7.3	InterPro:Acyl-CoA_DH_CS
InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C
EnsemblPlantsGene:Bra038291	EnsemblPlants:Bra038291.1	EnsemblPlants:Bra038291.1-P	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0003995	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005739	GO:GO:0005759	GO:GO:0006552	GO:GO:0008150	GO:GO:0008152
GO:GO:0008470	GO:GO:0009056	GO:GO:0009083	GO:GO:0009987	GO:GO:0016491	GO:GO:0016627
GO:GO:0050660	GO:GO:0055114	InterPro:IPR037069	InterPro:IVD	UniProt:M4FB25	PFAM:PF00441
PFAM:PF02770	PFAM:PF02771	PIRSF:PIRSF016578	ScanProsite:PS00072	ScanProsite:PS00073	PANTHER:PTHR43884
PANTHER:PTHR43884:SF10	SUPFAM:SSF47203	SUPFAM:SSF56645	UniParc:UPI000253EEA4	SEG:seg	:

Description

AT3G45300 (E=6e-211) IVD, ATIVD | IVD (ISOVALERYL-COA-DEHYDROGENASE); ATP binding / isovaleryl-CoA dehydrogenase

Coordinates

chrA06:+:11485169..11487820

Molecular Weight (calculated)

44642.9 Da

IEP (calculated)

8.192

GRAVY (calculated)

-0.145

Length

409 amino acids

Sequence
(BLAST)

001: MQRLFAARSV LGNAVKTRRR QHLSSLSSSL LFDETQLQFK ESVSKFAQDV IAPHAERIDK TNSFPKDVNL WKLMGEFNLH GITAPEEYGG LGLGYLYHCI
101: AMEEISRASG SVALSYGAHS NLCINQLVRN GNTSQKHKYL PKLISGEHVG ALAMSEPNAG SDVVSMKCKA DKVDGGFLIN GNKMWCTNGP SAQTLIVYAK
201: TDTKAGSKGI TAFVIEKGMA GFSTAQKLDK LGMRGSDTCE LVFENCFVPE ENILGKEGKG VYVLMSGLDL ERLVLAAGPL GIMQACLDIV LPYIRQREQF
301: GRPVGEFQFI QGKVADMYTA LQSSRSYVYS VARECDNGKV DPKDCAGTIL CAAERATQVA LQAIQCLGGN GYINEYATGR LLRDAKLYEI GAGTSEIRRM
401: VIGRELFKE

Best Arabidopsis Sequence Match ( AT3G45300.1 )
(BLAST)

001: MQRFFSARSI LGYAVKTRRR SFSSRSSSLL FDDTQLQFKE SVSKFAQDNI APHAERIDKT NSFPKDVNLW KLMGEFNLHG ITAPEEYGGL GLGYLYHCIA
101: MEEISRASGS VALSYGAHSN LCINQLVRNG TAAQKEKYLP KLISGEHVGA LAMSEPNAGS DVVGMKCKAE KVDGGYILNG NKMWCTNGPS AETLVVYAKT
201: DTKAGSKGIT AFIIEKGMTG FSTAQKLDKL GMRGSDTCEL VFENCFVPEE NILDKEGKGV YVLMSGLDLE RLVLAAGPLG IMQACLDNVL PYIRQREQFG
301: RPVGEFQFIQ GKVADMYTAL QSSRSYVYSV ARDCDNGKVD PKDCAGTILC AAERATQVAL QAIQCLGGNG YINEYATGRL LRDAKLYEIG AGTSEIRRIV
401: IGRELFKEE

Arabidopsis Description

IVDIsovaleryl-CoA dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SWG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.