Factsheet for TraesCS1B01G085100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G066800.2	Wheat	mitochondrion	95.83	95.83
TraesCS1D01G067800.2	Wheat	mitochondrion	96.08	94.69
HORVU1Hr1G013820.4	Barley	mitochondrion	90.2	93.4
Os05t0125500-01	Rice	mitochondrion	89.95	89.73
Zm00001d035475_P001	Maize	mitochondrion	85.54	89.49
EES18942	Sorghum	mitochondrion	79.9	87.17
GSMUA_Achr6P08800_001	Banana	mitochondrion	84.07	83.86
VIT_06s0004g03140.t01	Wine grape	mitochondrion	82.35	83.17
KRH24916	Soybean	mitochondrion	82.6	82.4
KRG89023	Soybean	mitochondrion	82.11	81.71
AT3G45300.1	Thale cress	mitochondrion	79.9	79.71
CDY53838	Canola	mitochondrion	79.9	79.71
Bra038291.1-P	Field mustard	mitochondrion	79.17	78.97
Solyc11g069180.1.1	Tomato	plastid	78.92	78.16
PGSC0003DMT400020955	Potato	mitochondrion	78.92	78.16
PGSC0003DMT400069152	Potato	mitochondrion	76.47	75.73
Solyc06g073560.2.1	Tomato	mitochondrion	76.23	75.49
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	79.66	70.04
Zm00001d010970_P003	Maize	cytosol, peroxisome, plasma membrane	87.99	64.22
TraesCS1B01G129300.1	Wheat	peroxisome	24.51	22.88
TraesCS2B01G127700.1	Wheat	peroxisome	20.34	9.96

Protein Annotations

KEGG:00280+1.3.8.4	Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:4.2.7.3	InterPro:Acyl-CoA_DH_CS
InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003995	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
GO:GO:0006552	GO:GO:0008150	GO:GO:0008152	GO:GO:0008470	GO:GO:0009056	GO:GO:0009083
GO:GO:0009987	GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	InterPro:IPR037069	InterPro:IVD
PFAM:PF00441	PFAM:PF02770	PFAM:PF02771	PIRSF:PIRSF016578	ScanProsite:PS00072	ScanProsite:PS00073
PANTHER:PTHR43884	PANTHER:PTHR43884:SF10	SUPFAM:SSF47203	SUPFAM:SSF56645	EnsemblPlantsGene:TraesCS1B01G085100	EnsemblPlants:TraesCS1B01G085100.1
TIGR:cd01156	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1B:-:69826754..69831070

Molecular Weight (calculated)

44567.7 Da

IEP (calculated)

6.972

GRAVY (calculated)

-0.166

Length

408 amino acids

Sequence
(BLAST)

001: MQRRLPALLR RAAGAGPARR WLSAASSLLF DDTQEQFKES VHRFAQEHIA PHAAAIDASN HFPKEVNLWK LMGDFNLHGL TSPEEYGGLG LGYMYHCIAM
101: EEISRASGSV GLSYGAHSNL CINQLVRHGS PAQKEKYLPK LISGEHIGAL AMSEPNSGSD VVSMKCKAEK VDGGYVINGN KMWCTNGPSA QTLVVYAKTD
201: ITAGSKGITA FIIEKGMPGF STAQKLDKLG MRGSDTCELV FENCFVPQEN VLGEEGKGVY VMMSGLDLER LVLAGGPIGL MQACLDVILP YVRQREQFGR
301: PIGEFQFLQG KMADMYTSLQ SSRSFVYSVA RDCDNGKVDR KDCAGVILFA AERATQVALE AIQCLGGNGY INEYPTGRLL RDAKLFEIGA GTSEIRRMII
401: GRELFKED

Best Arabidopsis Sequence Match ( AT3G45300.1 )
(BLAST)

001: MQRFFSARSI LGYAVKTRRR SFSSRSSSLL FDDTQLQFKE SVSKFAQDNI APHAERIDKT NSFPKDVNLW KLMGEFNLHG ITAPEEYGGL GLGYLYHCIA
101: MEEISRASGS VALSYGAHSN LCINQLVRNG TAAQKEKYLP KLISGEHVGA LAMSEPNAGS DVVGMKCKAE KVDGGYILNG NKMWCTNGPS AETLVVYAKT
201: DTKAGSKGIT AFIIEKGMTG FSTAQKLDKL GMRGSDTCEL VFENCFVPEE NILDKEGKGV YVLMSGLDLE RLVLAAGPLG IMQACLDNVL PYIRQREQFG
301: RPVGEFQFIQ GKVADMYTAL QSSRSYVYSV ARDCDNGKVD PKDCAGTILC AAERATQVAL QAIQCLGGNG YINEYATGRL LRDAKLYEIG AGTSEIRRIV
401: IGRELFKEE

Arabidopsis Description

IVDIsovaleryl-CoA dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SWG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.