Factsheet for Zm00001d010970_P003

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

mitochondrion 2
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d035475_P001	Maize	mitochondrion	65.83	94.36
Os05t0125500-01	Rice	mitochondrion	66.55	90.95
TraesCS1A01G066800.2	Wheat	mitochondrion	64.58	88.48
HORVU1Hr1G013820.4	Barley	mitochondrion	62.08	88.07
TraesCS1B01G085100.1	Wheat	mitochondrion	64.22	87.99
TraesCS1D01G067800.2	Wheat	mitochondrion	64.94	87.68
GSMUA_Achr6P08800_001	Banana	mitochondrion	61.0	83.37
VIT_06s0004g03140.t01	Wine grape	mitochondrion	59.93	82.92
KRH24916	Soybean	mitochondrion	59.57	81.42
AT3G45300.1	Thale cress	mitochondrion	59.21	80.93
KRG89023	Soybean	mitochondrion	58.86	80.24
Bra038291.1-P	Field mustard	mitochondrion	58.32	79.71
CDY53838	Canola	mitochondrion	58.14	79.46
PGSC0003DMT400020955	Potato	mitochondrion	57.6	78.16
Solyc11g069180.1.1	Tomato	plastid	57.6	78.16
PGSC0003DMT400069152	Potato	mitochondrion	56.17	76.21
Solyc06g073560.2.1	Tomato	mitochondrion	56.17	76.21
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	58.68	70.69
Zm00001d039768_P003	Maize	mitochondrion	18.78	23.28
Zm00001d037521_P002	Maize	peroxisome	18.25	23.18
Zm00001d007158_P014	Maize	peroxisome, plasma membrane	15.56	9.92

Protein Annotations

KEGG:00280+1.3.8.4	Gene3D:1.10.540.10	Gene3D:1.20.140.10	MapMan:50.1.3	ProteinID:AQK95328.1	ProteinID:AQK95329.1
InterPro:Acyl-CoA_DH_CS	InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C
InterPro:AcylCo_DH/oxidase_C	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003995	GO:GO:0005488
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	InterPro:IPR037069	InterPro:IVD	UniProt:K7V5S9
PFAM:PF00441	PFAM:PF02770	PFAM:PF02771	ScanProsite:PS00072	ScanProsite:PS00073	PANTHER:PTHR43884
PANTHER:PTHR43884:SF10	SUPFAM:SSF47203	SUPFAM:SSF56645	TMHMM:TMhelix	UniParc:UPI000220F86C	EnsemblPlantsGene:Zm00001d010970
EnsemblPlants:Zm00001d010970_P003	EnsemblPlants:Zm00001d010970_T003	SEG:seg	:	:	:

Description

Isovaleryl-CoA dehydrogenase mitochondrial

Coordinates

chr8:+:135473700..135484287

Molecular Weight (calculated)

61400.5 Da

IEP (calculated)

7.768

GRAVY (calculated)

-0.066

Length

559 amino acids

Sequence
(BLAST)

001: MGTQKKAAEW AARDAISHHQ SAAAPPTAPP ETGGEGRREL DATPTVLRLP ITTSPAPSTD QINQARPDPK MQRWLPALLR RAAPGGGAAR LFASSSLLFD
101: DTQEQFKESV RKFAQENIAP RAAAIDASNH FPRDVDLWRL MGDFNLHGLT APEEYGGMGL GYMYHCISME EITRASGAVG LSYGAHSNLC INQLVRHGSP
201: EQRLKYLPKV LCSPRICFVL SLCFARAIVF LRTMKMLTAS ICLAVLYSCI FAFSMKLISG EHIGALAMSE PNSGSDVVSM KCKAEKVDGG YVLNGNKMWC
301: TNGPSAQTLV VYAKTDLAAG SKGITAFIIE KGMPGYRTTP LSSLDMIEHE HMRFYSFLVM LLMVLVHDYR FSTAQKLDKL GMRGSDTCEL VFENCFVPRE
401: NVLGEEGKGV YVMMSGLDLE RLVLAAGPIG LMQACLDVVL PYVRQREQFG RPIGEFQFIQ GKMADMYTSL QSSRSFVYSV ARDCDNGKVD RKDCAGVILF
501: AAENATQVAL QAIQCLGGNG YINEYPTGRL LRDAKLFEIG AGTSEIRRMI IGRELFKED

Best Arabidopsis Sequence Match ( AT3G45300.1 )
(BLAST)

001: MQRFFSARSI LGYAVKTRRR SFSSRSSSLL FDDTQLQFKE SVSKFAQDNI APHAERIDKT NSFPKDVNLW KLMGEFNLHG ITAPEEYGGL GLGYLYHCIA
101: MEEISRASGS VALSYGAHSN LCINQLVRNG TAAQKEKYLP KLISGEHVGA LAMSEPNAGS DVVGMKCKAE KVDGGYILNG NKMWCTNGPS AETLVVYAKT
201: DTKAGSKGIT AFIIEKGMTG FSTAQKLDKL GMRGSDTCEL VFENCFVPEE NILDKEGKGV YVLMSGLDLE RLVLAAGPLG IMQACLDNVL PYIRQREQFG
301: RPVGEFQFIQ GKVADMYTAL QSSRSYVYSV ARDCDNGKVD PKDCAGTILC AAERATQVAL QAIQCLGGNG YINEYATGRL LRDAKLYEIG AGTSEIRRIV
401: IGRELFKEE

Arabidopsis Description

IVDIsovaleryl-CoA dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SWG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.