Factsheet for TraesCS1D01G067800.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G066800.2	Wheat	mitochondrion	97.83	99.26
TraesCS1B01G085100.1	Wheat	mitochondrion	94.69	96.08
HORVU1Hr1G013820.4	Barley	mitochondrion	88.89	93.4
Zm00001d035475_P001	Maize	mitochondrion	84.3	89.49
Os05t0125500-01	Rice	mitochondrion	88.41	89.49
EES18942	Sorghum	mitochondrion	78.74	87.17
GSMUA_Achr6P08800_001	Banana	mitochondrion	82.85	83.86
VIT_06s0004g03140.t01	Wine grape	mitochondrion	81.64	83.66
KRH24916	Soybean	mitochondrion	81.88	82.89
KRG89023	Soybean	mitochondrion	81.88	82.68
CDY53838	Canola	mitochondrion	79.23	80.2
AT3G45300.1	Thale cress	mitochondrion	78.99	79.95
Bra038291.1-P	Field mustard	mitochondrion	78.5	79.46
Solyc11g069180.1.1	Tomato	plastid	78.26	78.64
PGSC0003DMT400020955	Potato	mitochondrion	78.26	78.64
PGSC0003DMT400069152	Potato	mitochondrion	75.85	76.21
Solyc06g073560.2.1	Tomato	mitochondrion	75.6	75.97
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	78.74	70.26
Zm00001d010970_P003	Maize	cytosol, peroxisome, plasma membrane	87.68	64.94
TraesCS1D01G111900.1	Wheat	golgi, nucleus, plastid, unclear	24.15	22.88
TraesCS2D01G109900.1	Wheat	golgi, unclear	20.05	9.96

Protein Annotations

KEGG:00280+1.3.8.4	Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:4.2.7.3	InterPro:Acyl-CoA_DH_CS
InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003995	GO:GO:0005488	GO:GO:0005524
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005759
GO:GO:0006552	GO:GO:0008150	GO:GO:0008152	GO:GO:0008470	GO:GO:0009056	GO:GO:0009083
GO:GO:0009987	GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	InterPro:IPR037069	InterPro:IVD
PFAM:PF00441	PFAM:PF02770	PFAM:PF02771	PIRSF:PIRSF016578	ScanProsite:PS00072	ScanProsite:PS00073
PANTHER:PTHR43884	PANTHER:PTHR43884:SF10	SUPFAM:SSF47203	SUPFAM:SSF56645	EnsemblPlantsGene:TraesCS1D01G067800	EnsemblPlants:TraesCS1D01G067800.2
TIGR:cd01156	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:49588697..49592890

Molecular Weight (calculated)

45399.7 Da

IEP (calculated)

7.197

GRAVY (calculated)

-0.176

Length

414 amino acids

Sequence
(BLAST)

001: MQRRLPALLR RAAGAGPARR WLSAASSLLF DDTQEQFKES VHRFAQEHIA PHAAAIDASN YFPKEVNLWK LMGDFNLHGL TSPEEYGGLG LGYMYHCIAM
101: EEISRASGSV GLSYGAHSNL CINQLVRHGS PAQKEKYLPK LISGEHIGAL AMSEPNSGSD VVSMKCKAEK VDGGYVINGN KMWCTNGPSA QTLVVYAKTD
201: ITAGSKGITA FIIEKGMPGI SYHYRFSTAQ KLDKLGMRGS DTCELVFENC FVPQENVLGE EGKGVYVMMS GLDLERLVLA GGPIGLMQAC LDVVLPYVRQ
301: REQFGRPIGE FQFLQGKMAD MYTSLQSSRS FVYSVARDCD NGKVDRKDCA GVILFAAERA TQVALEAIQC LGGNGYINEY PTGRLLRDAK LFEIGAGTSE
401: IRRMIIGREL FKED

Best Arabidopsis Sequence Match ( AT3G45300.1 )
(BLAST)

001: MQRFFSARSI LGYAVKTRRR SFSSRSSSLL FDDTQLQFKE SVSKFAQDNI APHAERIDKT NSFPKDVNLW KLMGEFNLHG ITAPEEYGGL GLGYLYHCIA
101: MEEISRASGS VALSYGAHSN LCINQLVRNG TAAQKEKYLP KLISGEHVGA LAMSEPNAGS DVVGMKCKAE KVDGGYILNG NKMWCTNGPS AETLVVYAKT
201: DTKAGSKGIT AFIIEKGMTG FSTAQKLDKL GMRGSDTCEL VFENCFVPEE NILDKEGKGV YVLMSGLDLE RLVLAAGPLG IMQACLDNVL PYIRQREQFG
301: RPVGEFQFIQ GKVADMYTAL QSSRSYVYSV ARDCDNGKVD PKDCAGTILC AAERATQVAL QAIQCLGGNG YINEYATGRL LRDAKLYEIG AGTSEIRRIV
401: IGRELFKEE

Arabidopsis Description

IVDIsovaleryl-CoA dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SWG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.