Factsheet for Solyc06g073560.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
BaCelLo:	mitochondrion
ChloroP:	plastid
EpiLoc:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400069152	Potato	mitochondrion	96.84	96.84
VIT_06s0004g03140.t01	Wine grape	mitochondrion	81.55	83.17
KRH24916	Soybean	mitochondrion	80.83	81.42
Solyc11g069180.1.1	Tomato	plastid	80.34	80.34
AT3G45300.1	Thale cress	mitochondrion	79.61	80.2
CDY53838	Canola	mitochondrion	79.61	80.2
Bra038291.1-P	Field mustard	mitochondrion	79.37	79.95
GSMUA_Achr6P08800_001	Banana	mitochondrion	79.13	79.71
KRG89023	Soybean	mitochondrion	78.4	78.78
Zm00001d035475_P001	Maize	mitochondrion	74.27	78.46
HORVU1Hr1G013820.4	Barley	mitochondrion	74.27	77.67
Os05t0125500-01	Rice	mitochondrion	76.46	77.02
TraesCS1A01G066800.2	Wheat	mitochondrion	75.97	76.72
TraesCS1B01G085100.1	Wheat	mitochondrion	75.49	76.23
EES18942	Sorghum	mitochondrion	69.17	76.2
TraesCS1D01G067800.2	Wheat	mitochondrion	75.97	75.6
CDX86013	Canola	endoplasmic reticulum, mitochondrion, nucleus	79.13	70.26
Zm00001d010970_P003	Maize	cytosol, peroxisome, plasma membrane	76.21	56.17
Solyc10g076600.1.1	Tomato	peroxisome	25.49	23.92
Solyc10g085200.1.1	Tomato	peroxisome	23.3	23.02
Solyc01g066310.2.1	Tomato	nucleus	20.15	10.02
Solyc05g054370.2.1	Tomato	nucleus	20.15	10.01

Protein Annotations

KEGG:00280+1.3.8.4	Gene3D:1.10.540.10	Gene3D:1.20.140.10	Gene3D:2.40.110.10	MapMan:4.2.7.3	InterPro:Acyl-CoA_DH_CS
InterPro:Acyl-CoA_Oxase/DH_cen-dom	InterPro:AcylCoA_DH/ox_N	InterPro:AcylCoA_DH/ox_N_sf	InterPro:AcylCoA_DH/oxidase_NM_dom	InterPro:AcylCo_DH-like_C	InterPro:AcylCo_DH/oxidase_C
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003995	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0016627	GO:GO:0050660	GO:GO:0055114	InterPro:IPR037069
InterPro:IVD	UniProt:K4C975	PFAM:PF00441	PFAM:PF02770	PFAM:PF02771	PIRSF:PIRSF016578
ScanProsite:PS00072	ScanProsite:PS00073	PANTHER:PTHR43884	PANTHER:PTHR43884:SF10	SUPFAM:SSF47203	SUPFAM:SSF56645
EnsemblPlantsGene:Solyc06g073560.2	EnsemblPlants:Solyc06g073560.2.1	UniParc:UPI0002765F91	:	:	:

Description

No Description!

Coordinates

chr6:-:45355090..45359188

Molecular Weight (calculated)

45172.5 Da

IEP (calculated)

7.648

GRAVY (calculated)

-0.148

Length

412 amino acids

Sequence
(BLAST)

001: MHKLFAVRSL SSTIAKNFKS LQNQQAAFST SLLLDDTQKQ FKESVAKFAQ ENIAPYAEKI DRTNSFPKEI NLWKLMGDFN LHGITAPEEY GGLNLGYLYH
101: CIALEEISRA SGAVAVSYGV QSNVCINQLV RNGTPEQKQK YLPKLISGDH IGALAMSEPN AGSDVVSMKC RADRVDGGYV LNGNKMWCTN GPIANTLIVY
201: AKTDTTAGSK GITAFIIEKE MSGFSTAQKL DKLGMRGSDT CELVFENCFV PKENVLGHEG KGVYVLMSGL DLERLILAAG PIGIMQACMD IVIPYVQQRE
301: QFGRPIGEFQ LIQGKLADMY TALQSSRSYV YAVAKDCDNG KIDPKDCSGT ILLAAERATQ VALQAIQCLG GNGYINEYPT GRLLRDAKMY EIAAGTSEIR
401: RIIIGRELFK HQ

Best Arabidopsis Sequence Match ( AT3G45300.1 )
(BLAST)

001: MQRFFSARSI LGYAVKTRRR SFSSRSSSLL FDDTQLQFKE SVSKFAQDNI APHAERIDKT NSFPKDVNLW KLMGEFNLHG ITAPEEYGGL GLGYLYHCIA
101: MEEISRASGS VALSYGAHSN LCINQLVRNG TAAQKEKYLP KLISGEHVGA LAMSEPNAGS DVVGMKCKAE KVDGGYILNG NKMWCTNGPS AETLVVYAKT
201: DTKAGSKGIT AFIIEKGMTG FSTAQKLDKL GMRGSDTCEL VFENCFVPEE NILDKEGKGV YVLMSGLDLE RLVLAAGPLG IMQACLDNVL PYIRQREQFG
301: RPVGEFQFIQ GKVADMYTAL QSSRSYVYSV ARDCDNGKVD PKDCAGTILC AAERATQVAL QAIQCLGGNG YINEYATGRL LRDAKLYEIG AGTSEIRRIV
401: IGRELFKEE

Arabidopsis Description

IVDIsovaleryl-CoA dehydrogenase, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9SWG0]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.