Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G013820.4 | Barley | mitochondrion | 18.82 | 8.12 |
| HORVU1Hr1G024240.1 | Barley | mitochondrion, peroxisome, plastid | 11.76 | 4.23 |
| HORVU2Hr1G018720.2 | Barley | peroxisome | 17.06 | 3.63 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G027270.74 | EnsemblPlantsGene:HORVU4Hr1G027270 | Gene3D:3.90.1200.10 | PANTHER:PTHR10909 | PANTHER:PTHR10909:SF282 | UniParc:UPI000B465F8F |
| UniProt:A0A287NNC6 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr4H:+:167368397..167386547
Molecular Weight (calculated)
18900.4 Da
IEP (calculated)
9.151
GRAVY (calculated)
-0.325
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: LHGVTSIHTL TLDFQGETPY IIDGALSENS SYGGFEHSGI PDGIPQLEEY LAVYCSMSAR PWPAANWKLY IASSLFRGAS IYAGVYHRWT MGNASGGEHA
101: RFAGKAGNVM VDCAWDYINR ENVLRAHPAR GMHVSKAPQQ GFHVSLSKKT RFPCRAGRFK FDKWSRQICS
101: RFAGKAGNVM VDCAWDYINR ENVLRAHPAR GMHVSKAPQQ GFHVSLSKKT RFPCRAGRFK FDKWSRQICS
001: MATAVLSAAF RFPIVTRRLS APAPRIRFYH STIRFAHFRR FTTASPSMSQ QTGEIDAVVD ASSAEKPDDV VVQYVVLRRD LIDSWPLGSV VTQGCHASVA
101: AIWSFKDDPV TLQYCDPQHI DSMHKVTLEV KGETQMMNLS EKLKLGGISH KLWMEQPENI PTCIATKPYP KSQVSSFFKK LKLCKNTIHK ASQRFGYMYI
101: AIWSFKDDPV TLQYCDPQHI DSMHKVTLEV KGETQMMNLS EKLKLGGISH KLWMEQPENI PTCIATKPYP KSQVSSFFKK LKLCKNTIHK ASQRFGYMYI
Arabidopsis Description
Peptidyl-tRNA hydrolase II (PTH2) family protein [Source:UniProtKB/TrEMBL;Acc:Q9FT62]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.