Factsheet for Zm00001d001906_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11620	Sorghum	cytosol	77.36	90.77
Os04t0669300-01	Rice	plasma membrane	72.17	84.69
HORVU2Hr1G122390.1	Barley	cytosol	68.55	79.56
TraesCS2D01G544000.1	Wheat	cytosol	67.92	79.12
TraesCS2B01G572600.1	Wheat	cytosol	67.61	78.75
TraesCS2A01G542800.1	Wheat	cytosol	67.45	78.57
PGSC0003DMT400034517	Potato	cytosol	34.28	75.96
GSMUA_Achr4P20130_001	Banana	cytosol	63.05	73.85
Zm00001d014526_P002	Maize	cytosol	61.48	71.48
VIT_00s0516g00020.t01	Wine grape	cytosol	60.22	69.64
KRH11510	Soybean	cytosol	58.8	69.39
Zm00001d053858_P001	Maize	cytosol, extracellular	59.12	68.74
KRH36524	Soybean	cytosol	58.02	68.46
KRH51151	Soybean	cytosol	58.65	68.44
KRH02006	Soybean	cytosol	58.33	68.07
AT4G05520.1	Thale cress	cytosol	58.33	67.95
CDY16689	Canola	cytosol	58.02	67.58
Bra029477.1-P	Field mustard	cytosol	58.02	67.58
CDX94536	Canola	cytosol	57.86	67.28
Solyc11g012020.1.1	Tomato	cytosol	56.76	66.0
GSMUA_Achr3P01050_001	Banana	cytosol, plastid	62.89	63.9
KRH45544	Soybean	cytosol	16.51	44.87
Zm00001d027503_P036	Maize	cytosol	14.31	8.58
Zm00001d048338_P035	Maize	cytosol	13.52	7.93
Zm00001d037125_P009	Maize	cytosol	13.68	7.2
Zm00001d014862_P002	Maize	cytosol	13.36	7.02

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.268.20	EntrezGene:100381653	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A1D6DU63
ncoils:Coil	InterPro:Dynamin_SF	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:EHD_N	InterPro:EH_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005525
InterPro:G_DYNAMIN_dom	InterPro:IPR000261	InterPro:IPR002048	InterPro:IPR030381	ProteinID:ONM12389.1	InterPro:P-loop_NTPase
PFAM:PF00350	PFAM:PF16880	PFscan:PS50031	PFscan:PS50222	PFscan:PS51718	PANTHER:PTHR11216
PANTHER:PTHR11216:SF85	SUPFAM:SSF47473	SUPFAM:SSF52540	UniParc:UPI0008438D5D	EnsemblPlantsGene:Zm00001d001906	EnsemblPlants:Zm00001d001906_P004
EnsemblPlants:Zm00001d001906_T004	SEG:seg	:	:	:	:

Description

EH domain-containing protein 1

Coordinates

chr2:-:2644303..2648830

Molecular Weight (calculated)

70975.1 Da

IEP (calculated)

9.574

GRAVY (calculated)

-0.271

Length

636 amino acids

Sequence
(BLAST)

001: MDGRRRVCRA LEEPSPTPYI RGKPLPARAF AVVAFLEARV GQLSPSSSVP LLVSASPDSG REGGERAGER DGAGLVAQEV EPQGAARCLP PVVRPRRRRF
101: FAMSNLSKPE LKQVWAIADS KRQGYLGFYE FMTAMQLVSL AQAGNEINQD TLPNADLEKL QLPTMDGLAK KLKKNSGSKV ESAIVACHPS EAPTMTASWF
201: NSKSGKKIPL KSVTSIVDGL KKSYIEKLRP LEKTYQFHDF VSPLLVIFTP LFYLQFNLFY NKGKSVVKCC VAPLLVISAP LPFKQTSSDF DAKPMVMLLG
301: QYSTGKTTFI KHLLKTSYPG AHIGPEPTTD RFVVITSGPD ERCIPGNTIA VQADMPYSGL SSFGTAFLSK FECSQMPHPL LEHVTFVDTP GVLSGEKQRT
401: QRSYDFTGVT SWFAAKCDLI LLLFDPHKLD ISDEFKRVIG SLRGHDDKIR IVLNKADQLM RVYGALLWSL GKVLNTPEVM RVYIGSFNDK PIRETAAGPL
501: GMELFQKEQD DLLSDLNDIP KKACDRRINE FVKRARAAKV HAHIISHLKK EMPALMGKAK AQQKLLDGLD QQFAKVQKEL HLPPGDFPSV EEYRELLSAY
601: NFDRFEKLRP KMVQGVDDML AYDIPDLLKK FRNPYD

Best Arabidopsis Sequence Match ( AT3G20290.1 )
(BLAST)

001: MEIESVAAGS CSKENQMIYK EWFEFSDSDG DGRITGNDAI KFFTMSNLPR PELKQIWAIA DSKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLISDVDF
101: KNINPPTMEG LGVLMAKKKH SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE
301: KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP
401: INEAATGPIG RELFEKEQDD LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED EFGKVQREHH LPKGDFPNVD
501: HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF KNPYD

Arabidopsis Description

EHD1EHD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VAZ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.