Factsheet for TraesCS2D01G544000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G542800.1	Wheat	cytosol	98.72	98.72
TraesCS2B01G572600.1	Wheat	cytosol	98.35	98.35
HORVU2Hr1G122390.1	Barley	cytosol	91.58	91.24
Os04t0669300-01	Rice	plasma membrane	86.26	86.9
EES11620	Sorghum	cytosol	84.07	84.69
PGSC0003DMT400034517	Potato	cytosol	39.56	75.26
GSMUA_Achr4P20130_001	Banana	cytosol	74.73	75.14
TraesCS7D01G430800.1	Wheat	cytosol	73.63	73.76
TraesCS6D01G121200.1	Wheat	cytosol	70.51	70.38
VIT_00s0516g00020.t01	Wine grape	cytosol	70.7	70.18
KRH11510	Soybean	cytosol	68.31	69.2
KRH51151	Soybean	cytosol	69.05	69.17
KRH36524	Soybean	cytosol	68.13	69.02
KRH02006	Soybean	cytosol	68.68	68.81
AT4G05520.1	Thale cress	cytosol	67.95	67.95
Zm00001d001906_P004	Maize	cytosol	79.12	67.92
Solyc11g012020.1.1	Tomato	cytosol	67.58	67.46
CDY16689	Canola	cytosol	67.4	67.4
Bra029477.1-P	Field mustard	cytosol	67.4	67.4
CDX94536	Canola	cytosol	67.4	67.28
GSMUA_Achr3P01050_001	Banana	cytosol, plastid	73.63	64.22
KRH45544	Soybean	cytosol	21.06	49.15
TraesCS4D01G321600.1	Wheat	cytosol	17.95	9.0
TraesCS7D01G539600.2	Wheat	cytosol	16.85	7.12

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.268.20	Gene3D:3.40.50.300	MapMan:35.1	ncoils:Coil	InterPro:Dynamin_SF
InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:EHD_N	InterPro:EH_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005525	InterPro:G_DYNAMIN_dom	InterPro:IPR000261
InterPro:IPR002048	InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF12763	PFAM:PF16880
PFscan:PS50031	PFscan:PS50222	PFscan:PS51718	PANTHER:PTHR11216	PANTHER:PTHR11216:SF85	SMART:SM00027
SUPFAM:SSF47473	SUPFAM:SSF52540	EnsemblPlantsGene:TraesCS2D01G544000	EnsemblPlants:TraesCS2D01G544000.1	TIGR:cd00052	TIGR:cd09913

Description

No Description!

Coordinates

chr2D:+:621473717..621477223

Molecular Weight (calculated)

61425.5 Da

IEP (calculated)

8.098

GRAVY (calculated)

-0.417

Length

546 amino acids

Sequence
(BLAST)

001: MESSSADSSP TRSWGLKEQR SVYLRWFYLA DDDADGRLTG KDALKFFAMS KLSREDLKQV WAIADSKRQG YLGFTEFMTA MQLVSLAQAG QDISQDTLAH
101: ADLGTLQPPT MEGLEKKLKK SGAHKSSSDL TAYHPVQTSM SANWFNSKSG KKIAMKSVTS IIDGLKKAYI EKLRPLEKTY QYNDFVSPLL TSSDFDAKPM
201: IMLLGQYSTG KTTFIKHLLK SSYPGSHIGP EPTTDRFVVV TTGPDERCIP GNTIAVQADM PYSGLSAFGT AFLSKFECSQ MPHPLLDHIS FVDTPGVLSG
301: EKQRTQRSYD FTGVTSWFAA KSDLILLLFD PHKLDISDEF KRVIGSLRGH DDKIRIVLNK ADQVDAQQLM RVYGALLWSL GKVLNTPEVM RVYIGSFNDK
401: PIRETAAGPL GSELFVREQE DLLSDLNDIP KKACDRRINE FVKRARSAKV HAHIVGHLKN QMPALMGKAK AQQKLLETLD EQFAKVQKEM HLPPGDFPSV
501: DEYRDTLSAY NFDRFERLHT KMVKDVDDML AYDIPDLLKQ FRNPYE

Best Arabidopsis Sequence Match ( AT3G20290.1 )
(BLAST)

001: MEIESVAAGS CSKENQMIYK EWFEFSDSDG DGRITGNDAI KFFTMSNLPR PELKQIWAIA DSKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLISDVDF
101: KNINPPTMEG LGVLMAKKKH SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE
301: KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP
401: INEAATGPIG RELFEKEQDD LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED EFGKVQREHH LPKGDFPNVD
501: HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF KNPYD

Arabidopsis Description

EHD1EHD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VAZ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.