Factsheet for HORVU2Hr1G122390.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G544000.1	Wheat	cytosol	91.24	91.58
TraesCS2A01G542800.1	Wheat	cytosol	91.24	91.58
TraesCS2B01G572600.1	Wheat	cytosol	90.88	91.21
Os04t0669300-01	Rice	plasma membrane	84.85	85.79
EES11620	Sorghum	cytosol	83.21	84.13
PGSC0003DMT400034517	Potato	cytosol	39.42	75.26
GSMUA_Achr4P20130_001	Banana	cytosol	74.45	75.14
VIT_00s0516g00020.t01	Wine grape	cytosol	70.62	70.36
KRH36524	Soybean	cytosol	68.25	69.39
KRH51151	Soybean	cytosol	68.98	69.36
KRH11510	Soybean	cytosol	68.07	69.2
KRH02006	Soybean	cytosol	68.43	68.81
Zm00001d001906_P004	Maize	cytosol	79.56	68.55
AT4G05520.1	Thale cress	cytosol	67.88	68.13
CDY16689	Canola	cytosol	66.97	67.22
Bra029477.1-P	Field mustard	cytosol	66.97	67.22
CDX94536	Canola	cytosol	66.61	66.73
Solyc11g012020.1.1	Tomato	cytosol	66.24	66.36
HORVU0Hr1G015420.3	Barley	cytosol, plastid	69.71	63.46
GSMUA_Achr3P01050_001	Banana	cytosol, plastid	72.26	63.26
HORVU7Hr1G100500.8	Barley	cytosol, plastid	69.16	59.69
HORVU7Hr1G060580.1	Barley	cytosol, plastid	42.15	53.1
KRH45544	Soybean	cytosol	20.26	47.44
HORVU4Hr1G082280.2	Barley	cytosol	17.88	8.66
HORVU7Hr1G121230.4	Barley	cytosol	15.33	6.48

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.268.20	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A287JQY6	ncoils:Coil
InterPro:Dynamin_SF	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:EHD_N	InterPro:EH_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005525	InterPro:G_DYNAMIN_dom
EnsemblPlantsGene:HORVU2Hr1G122390	EnsemblPlants:HORVU2Hr1G122390.1	InterPro:IPR000261	InterPro:IPR002048	InterPro:IPR030381	InterPro:P-loop_NTPase
PFAM:PF00350	PFAM:PF12763	PFAM:PF16880	PFscan:PS50031	PFscan:PS50222	PFscan:PS51718
PANTHER:PTHR11216	PANTHER:PTHR11216:SF85	SMART:SM00027	SUPFAM:SSF47473	SUPFAM:SSF52540	UniParc:UPI000B483DD5
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:753153915..753157407

Molecular Weight (calculated)

59176.1 Da

IEP (calculated)

8.011

GRAVY (calculated)

-0.357

Length

548 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXSVYLRWFY LADDDADGRL TGKDALKFFA MSKLSRDDLK QVWAIADSKR QGYLGFAEFM TAMQLVSLAQ AGQDISQDTL
101: AHADLGSLQP PTMEGLEKKL KKSSTHKSTS DLAAYHPIQS PMSANWFNSK SGKKIAMKSV TSIIDGLKKA YIEKLRPLEK TYQYSDFVSP LLTSSDFDAK
201: PMIMLLGQYS TGKTTFIKHL LKTSYPGAHI GPEPTTDRFV VITTGPDERC IPGNTIAVQA DMPYSGLSAF GTAFLSKFEC SQMPHPLLDH ITFVDTPGVL
301: SGEKQRTQRS YDFTGVTSWF ASKCDLILLL FDPHKLDISD EFKRVIGSLR GHDDKIRIVL NKADQVDAQQ LMRVYGALLW SLGKVLNTPE VMRVYIGSFN
401: DKPIRETAAG PLGTELFERE QEDLLSDLND IPKKACDRRI NEFVKRARSA KVHAHIVGHL KNNMPALMGK AKAQQKLLET LDEQFAKVQK EMHLPAGDFP
501: GVDEYRDALS AYNFDRFERL RPKMVKDVDD MLAYDIPDLL KQFRNPYD

Best Arabidopsis Sequence Match ( AT3G20290.1 )
(BLAST)

001: MEIESVAAGS CSKENQMIYK EWFEFSDSDG DGRITGNDAI KFFTMSNLPR PELKQIWAIA DSKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLISDVDF
101: KNINPPTMEG LGVLMAKKKH SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE
301: KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP
401: INEAATGPIG RELFEKEQDD LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED EFGKVQREHH LPKGDFPNVD
501: HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF KNPYD

Arabidopsis Description

EHD1EHD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VAZ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.