Factsheet for GSMUA_Achr3P01050_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
mitochondrion 1
cytosol 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P20130_001	Banana	cytosol	75.08	86.56
GSMUA_Achr3P20100_001	Banana	cytosol, endoplasmic reticulum	56.23	81.86
PGSC0003DMT400034517	Potato	cytosol	36.58	79.79
VIT_00s0516g00020.t01	Wine grape	cytosol	69.01	78.55
GSMUA_Achr5P23200_001	Banana	cytosol	66.61	77.08
EES11620	Sorghum	cytosol	66.61	76.94
Os04t0669300-01	Rice	plasma membrane	65.5	75.65
KRH36524	Soybean	cytosol	65.02	75.51
KRH51151	Soybean	cytosol	65.66	75.41
KRH02006	Soybean	cytosol	65.5	75.23
KRH11510	Soybean	cytosol	64.38	74.77
CDY16689	Canola	cytosol	64.38	73.81
Bra029477.1-P	Field mustard	cytosol	64.38	73.81
TraesCS2D01G544000.1	Wheat	cytosol	64.22	73.63
TraesCS2A01G542800.1	Wheat	cytosol	64.22	73.63
AT4G05520.1	Thale cress	cytosol	64.06	73.44
CDX94536	Canola	cytosol	64.06	73.31
TraesCS2B01G572600.1	Wheat	cytosol	63.74	73.08
Solyc11g012020.1.1	Tomato	cytosol	63.26	72.39
HORVU2Hr1G122390.1	Barley	cytosol	63.26	72.26
GSMUA_Achr5P23220_001	Banana	cytosol	54.63	67.59
Zm00001d001906_P004	Maize	cytosol	63.9	62.89
GSMUA_Achr3P20110_001	Banana	cytosol	14.86	59.24
KRH45544	Soybean	cytosol	20.29	54.27
GSMUA_Achr8P13410_001	Banana	cytosol	2.56	28.07
GSMUA_Achr8P13420_001	Banana	cytosol	14.86	9.77
GSMUA_Achr5P19150_001	Banana	endoplasmic reticulum	14.7	9.71
GSMUA_Achr4P11750_001	Banana	cytosol	15.81	9.23

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.268.20	Gene3D:3.40.50.300	MapMan:35.1	ncoils:Coil	InterPro:Dynamin_SF
InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:EHD_N	InterPro:EH_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005525	EnsemblPlantsGene:GSMUA_Achr3G01050_001	EnsemblPlants:GSMUA_Achr3P01050_001
EnsemblPlants:GSMUA_Achr3T01050_001	InterPro:G_DYNAMIN_dom	InterPro:IPR000261	InterPro:IPR002048	InterPro:IPR030381	UniProt:M0SAS3
InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF12763	PFAM:PF16880	PFscan:PS50031	PFscan:PS50222
PFscan:PS51718	PANTHER:PTHR11216	PANTHER:PTHR11216:SF114	SMART:SM00027	SMART:SM00054	SUPFAM:SSF47473
SUPFAM:SSF52540	UniParc:UPI0002968422	SEG:seg	:	:	:

Description

Putative EH domain-containing protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr3G01050_001]

Coordinates

chr3:-:776843..787333

Molecular Weight (calculated)

70218.6 Da

IEP (calculated)

9.472

GRAVY (calculated)

-0.348

Length

626 amino acids

Sequence
(BLAST)

001: MVVNSVRSVF TRNIGSFGDS NGRPAPPPLS FGPTSTTRTP LFCFPPLGKQ RQRKGSSSPG SRPPFPRPRP ISGNPAMNLM ASSRASCSKE QQKIYQQWFA
101: YADKDGDGRI TGSDALKFFA MSKLSRPELK QVWAIADSKR QGFLDLLDFI SAMQLVALAQ AGYEITPDVL SHADLENLKL PVMEGLDALL AKSKRSAKKS
201: DHRLDASPQH LLPASAAWFN SKASKKVPLS SVTSIIDGLK KLYIEKLKPL EVAYQFNEFV SPLLTNSDFD AKPMVMLLGQ YSTGKTTFIK HLLQSSYPGA
301: HIGPEPTTDR FVVVTFYAIM QSGPDERSIP GNTIAVQAHM PYHGLTAYGT GFLSKFECSQ MPHPLLEHIN FIDTPGVLSG EKQRTQRSYD FTGVTSWFAA
401: KCDLILLLFD PYKLDISDEF KRVIGSLHGH DDKIRVVLNK ADQVDTQQLM RVYGALLWSL GKVLNTPEVM RVYIGSFNDK PVNEAASGPI GKELFVREQD
501: DLLSDLKDIP KKACDRRINE FVKRARAAKI HAYIISHLKK EMPSMMGKAK AQQRLVDNLE DEFVKVQKEF HLPPGDFPDV EHFREVLNGY NIDKFEKLRH
601: KMIQAVDDML AYDIPELLNR FRNPYD

Best Arabidopsis Sequence Match ( AT3G20290.3 )
(BLAST)

001: MEIESVAAGS CSKENQMIYK EWFEFSDSDG DGRITGNDAI KFFTMSNLPR PELKQIWAIA DSKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLISDVDF
101: KNINPPTMEG LGVLMAKKKH SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE
301: KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP
401: INEAATGPIG RELFEKEQDD LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED EFGKVQREHH LPKGDFPNVD
501: HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF KNPYD

Arabidopsis Description

EHD1EHD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VAZ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.