CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02006	Soybean	cytosol	97.98	97.98
KRH11510	Soybean	cytosol	84.95	85.9
KRH36524	Soybean	cytosol	84.77	85.71
VIT_00s0516g00020.t01	Wine grape	cytosol	81.83	81.09
PGSC0003DMT400034517	Potato	cytosol	42.39	80.49
EER88852	Sorghum	cytosol	78.9	79.04
TraesCS7D01G430800.1	Wheat	cytosol	78.9	78.9
TraesCS7A01G441500.1	Wheat	cytosol	78.72	78.72
Os06t0687800-01	Rice	plasma membrane	78.53	78.68
TraesCS7B01G340200.2	Wheat	cytosol	78.53	78.53
Os02t0158100-01	Rice	cytosol	77.43	77.72
Zm00001d014526_P002	Maize	cytosol	77.61	77.33
KRH73798	Soybean	cytosol	77.8	77.23
GSMUA_Achr4P20130_001	Banana	cytosol	76.51	76.8
AT4G05520.1	Thale cress	cytosol	76.7	76.56
TraesCS6B01G159700.1	Wheat	cytosol	76.7	76.42
OQU84412	Sorghum	cytosol	76.51	76.23
TraesCS6D01G121200.1	Wheat	cytosol	76.33	76.05
GSMUA_Achr5P23200_001	Banana	cytosol	75.05	75.6
Zm00001d053858_P001	Maize	cytosol, extracellular	75.78	75.5
CDY16689	Canola	cytosol	75.05	74.91
KRG98685	Soybean	cytosol	74.31	74.86
CDX94536	Canola	cytosol	75.05	74.77
Bra029477.1-P	Field mustard	cytosol	74.86	74.73
Solyc11g012020.1.1	Tomato	cytosol	74.68	74.41
Os04t0669300-01	Rice	plasma membrane	72.66	73.06
EES11620	Sorghum	cytosol	72.11	72.51
TraesCS6A01G131300.2	Wheat	cytosol, plastid	76.33	69.92
HORVU0Hr1G015420.3	Barley	cytosol, plastid	76.51	69.27
TraesCS2A01G542800.1	Wheat	cytosol	69.36	69.23
TraesCS2D01G544000.1	Wheat	cytosol	69.17	69.05
TraesCS2B01G572600.1	Wheat	cytosol	69.17	69.05
HORVU2Hr1G122390.1	Barley	cytosol	69.36	68.98
GSMUA_Achr5P23220_001	Banana	cytosol	61.28	66.01
KRH45544	Soybean	cytosol	28.26	65.81
GSMUA_Achr3P01050_001	Banana	cytosol, plastid	75.41	65.66
HORVU7Hr1G100500.8	Barley	cytosol, plastid	76.33	65.51
Zm00001d001906_P004	Maize	cytosol	68.44	58.65
HORVU7Hr1G060580.1	Barley	cytosol, plastid	45.87	57.47
GSMUA_Achr3P20110_001	Banana	cytosol	16.15	56.05
KRH74100	Soybean	cytosol	6.79	27.82
KRH14013	Soybean	endoplasmic reticulum	20.18	10.61
KRH51589	Soybean	endoplasmic reticulum	20.73	10.5
KRH60909	Soybean	endoplasmic reticulum	20.18	10.36
KRH74101	Soybean	endoplasmic reticulum	13.03	8.28

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.268.20	EntrezGene:100786047	Gene3D:3.40.50.300	MapMan:35.1	EMBL:ACUP02004729
ncoils:Coil	InterPro:Dynamin_SF	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:EHD_N	InterPro:EH_dom
EnsemblPlantsGene:GLYMA_07G264600	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515
GO:GO:0005525	InterPro:G_DYNAMIN_dom	UniProt:I1KNI2	InterPro:IPR000261	InterPro:IPR002048	InterPro:IPR030381
EnsemblPlants:KRH51151	ProteinID:KRH51151	ProteinID:KRH51151.1	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF12763
PFAM:PF16880	PFscan:PS50031	PFscan:PS50222	PFscan:PS51718	PANTHER:PTHR11216	PANTHER:PTHR11216:SF76
SMART:SM00027	SMART:SM00054	SUPFAM:SSF47473	SUPFAM:SSF52540	UniParc:UPI0002339086	:

Description

hypothetical protein

Coordinates

chr7:+:43873482..43878279

Molecular Weight (calculated)

61442.1 Da

IEP (calculated)

6.685

GRAVY (calculated)

-0.253

Length

545 amino acids

Sequence
(BLAST)

001: MKTVSDWIDS CSKEQLKTYQ DWFNLADSDG DGRITGNDAT KFFALSNLSR SQLKQVWAIA DAKRQGYLGF QEFVMAMQLV ALAQVGHDIN SDILKTEIDK
101: ENIKSPVMEG LDALIAKTKS LTVNAQPDVF GTAIPQPLPL NSWAAPKSVK KLPLSAVTSI IDGLKRLYVE RLKPLEVTYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLRC DYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTIAVDADMP FSGLTTFGGS FLSKFQCSQM PHPLLDEITF VDTPGVLSGE
301: KQRTQRSYDF TGVISWFAAK CDLILLLFDP HKLDISDEFK RVIGSLRGHD DKIRVVLNKA DQIDTQQLMR VYGALMWSLG KVLNTPEVVR VYIGSFNVKP
401: INEGFVGPLG QELFEKEQND LLADLVDIPR KACDSRINEF VKRARSAKIH AYIISHLRNE MPAMMGKAKT QQRLIDNLED EFRKVQREFH LPAGDFPNVE
501: HFREVLSGYS IDKFEKLKPK MIQAVDDMLG YEIPELLKKF RNPYD

Best Arabidopsis Sequence Match ( AT4G05520.1 )
(BLAST)

001: METSSTISIG SCLKEHQKIY KEWFNIADSD GDGRVSGNDA TKFFAMSKLS RQELKQVWAV ADSKRQGFLG LSEFITAMKL VSLAQEGHEI TSDLLKGSID
101: MKSVELPVLE GLENVVSKQK VSKTNVDVED NVVTKPQVTA KTPWFKSKSI IKPQVNVVTI VDGLKRLYTE KLKPLEVTYR FNDFASPVLT SSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLGC DYPGAHIGPE PTTDRFVVAM SGPDERTIPG NTMAVQADMP FNGLTSFGGA FLSKFECSQM PHPVLDQITL VDTPGVLSGE
301: KQRMQRSYDF TGVISWFASK CDMILLLFDP HKLDISDEFK RVITSLRGNE DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVVR VYIGSFNDKP
401: INEVAVGPIG KELFEKEQND LLADLMDVPK KACDRKINEF VKRARSAKIN AYIMSHLKKE MPAMMGKSKA QQRLMDNLEE EFGKVQREFH LPAGDFPSVE
501: HFREVLGGYN IDKFEKLKPK MIQAVDDMLG YDIPDLLKKF RNPYDN

Arabidopsis Description

EHD2EH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:B3LF48]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.