Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH45544 | Soybean | cytosol | 47.13 | 31.62 |
GSMUA_Achr8P13410_001 | Banana | cytosol | 10.83 | 29.82 |
GSMUA_Achr5P23220_001 | Banana | cytosol | 59.87 | 18.58 |
GSMUA_Achr5P23200_001 | Banana | cytosol | 63.06 | 18.3 |
Solyc11g012020.1.1 | Tomato | cytosol | 59.24 | 17.0 |
GSMUA_Achr4P20130_001 | Banana | cytosol | 58.6 | 16.94 |
VIT_00s0516g00020.t01 | Wine grape | cytosol | 58.6 | 16.73 |
KRH02006 | Soybean | cytosol | 56.69 | 16.33 |
KRH36524 | Soybean | cytosol | 56.05 | 16.33 |
KRH51151 | Soybean | cytosol | 56.05 | 16.15 |
KRH11510 | Soybean | cytosol | 54.14 | 15.77 |
AT4G05520.1 | Thale cress | cytosol | 53.5 | 15.38 |
CDY16689 | Canola | cytosol | 52.87 | 15.2 |
Bra029477.1-P | Field mustard | cytosol | 52.87 | 15.2 |
CDX94536 | Canola | cytosol | 52.23 | 14.99 |
GSMUA_Achr3P01050_001 | Banana | cytosol, plastid | 59.24 | 14.86 |
GSMUA_Achr3P20100_001 | Banana | cytosol, endoplasmic reticulum | 13.38 | 4.88 |
GSMUA_Achr4P11750_001 | Banana | cytosol | 29.3 | 4.29 |
GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 20.38 | 3.38 |
GSMUA_Achr8P13420_001 | Banana | cytosol | 18.47 | 3.05 |
PGSC0003DMT400034517 | Potato | cytosol | 5.1 | 2.79 |
Protein Annotations
Gene3D:1.10.238.10 | MapMan:35.1 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:EH_dom | GO:GO:0003674 |
GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr3G20110_001 | EnsemblPlants:GSMUA_Achr3P20110_001 | EnsemblPlants:GSMUA_Achr3T20110_001 |
InterPro:IPR000261 | InterPro:IPR002048 | UniProt:M0SG77 | PFAM:PF12763 | PFscan:PS50031 | PFscan:PS50222 |
PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | SMART:SM00027 | SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI000296512B |
Description
Putative Uncharacterized calcium-binding protein C800.10c [Source:GMGC_GENE;Acc:GSMUA_Achr3G20110_001]
Coordinates
chr3:-:21321483..21324915
Molecular Weight (calculated)
17314.4 Da
IEP (calculated)
4.923
GRAVY (calculated)
-0.342
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MDFPSYSTSK EQARIYNEWF SFADSDGDGR ITGNDAIKFF SLSNLSRPDL KQIWAIADSK RQGFLGFGEF VTAMQLVALA QAGNEITQDT LANADLEKLN
101: PPVMEGLDTL LSRNKASTKK IDPEIDVNSK PQNPPSTVQW FSSKSAKKVL LAAISFC
101: PPVMEGLDTL LSRNKASTKK IDPEIDVNSK PQNPPSTVQW FSSKSAKKVL LAAISFC
001: MEIESVAAGS CSKENQMIYK EWFEFSDSDG DGRITGNDAI KFFTMSNLPR PELKQIWAIA DSKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLISDVDF
101: KNINPPTMEG LGVLMAKKKH SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE
301: KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP
401: INEAATGPIG RELFEKEQDD LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED EFGKVQREHH LPKGDFPNVD
501: HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF KNPYD
101: KNINPPTMEG LGVLMAKKKH SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE
301: KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP
401: INEAATGPIG RELFEKEQDD LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED EFGKVQREHH LPKGDFPNVD
501: HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF KNPYD
Arabidopsis Description
EHD1EHD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VAZ5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.