CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16689	Canola	cytosol	98.54	98.72
AT4G05520.1	Thale cress	cytosol	93.24	93.41
PGSC0003DMT400034517	Potato	cytosol	43.69	83.28
VIT_00s0516g00020.t01	Wine grape	cytosol	78.43	78.0
Os02t0158100-01	Rice	cytosol	75.5	76.06
KRH36524	Soybean	cytosol	74.59	75.7
KRH11510	Soybean	cytosol	74.59	75.7
GSMUA_Achr4P20130_001	Banana	cytosol	74.95	75.51
OQU84412	Sorghum	cytosol	75.5	75.5
TraesCS6B01G159700.1	Wheat	cytosol	75.5	75.5
Os06t0687800-01	Rice	plasma membrane	74.95	75.37
TraesCS6D01G121200.1	Wheat	cytosol	75.32	75.32
KRH02006	Soybean	cytosol	74.95	75.23
KRH51151	Soybean	cytosol	74.77	75.05
EER88852	Sorghum	cytosol	74.41	74.82
Zm00001d053858_P001	Maize	cytosol, extracellular	74.59	74.59
TraesCS7D01G430800.1	Wheat	cytosol	74.04	74.31
TraesCS7A01G441500.1	Wheat	cytosol	73.86	74.13
TraesCS7B01G340200.2	Wheat	cytosol	73.86	74.13
CDY29816	Canola	cytosol	70.75	73.57
CDY25408	Canola	cytosol	70.57	73.52
Zm00001d014526_P002	Maize	cytosol	73.31	73.31
GSMUA_Achr5P23200_001	Banana	cytosol	72.21	73.01
CDY50093	Canola	cytosol	70.75	72.88
Solyc11g012020.1.1	Tomato	cytosol	72.21	72.21
Os04t0669300-01	Rice	plasma membrane	71.12	71.77
EES11620	Sorghum	cytosol	69.84	70.48
TraesCS6A01G131300.2	Wheat	cytosol, plastid	75.32	69.24
CDY50090	Canola	cytosol	71.3	68.42
HORVU0Hr1G015420.3	Barley	cytosol, plastid	75.14	68.27
TraesCS2D01G544000.1	Wheat	cytosol	67.28	67.4
TraesCS2A01G542800.1	Wheat	cytosol	66.73	66.85
TraesCS2B01G572600.1	Wheat	cytosol	66.73	66.85
HORVU2Hr1G122390.1	Barley	cytosol	66.73	66.61
GSMUA_Achr5P23220_001	Banana	cytosol	60.33	65.22
GSMUA_Achr3P01050_001	Banana	cytosol, plastid	73.31	64.06
HORVU7Hr1G100500.8	Barley	cytosol, plastid	70.93	61.1
Zm00001d001906_P004	Maize	cytosol	67.28	57.86
HORVU7Hr1G060580.1	Barley	cytosol, plastid	43.88	55.17
KRH45544	Soybean	cytosol	23.4	54.7
GSMUA_Achr3P20110_001	Banana	cytosol	14.99	52.23
CDX96625	Canola	cytosol	18.65	10.41
CDY31869	Canola	cytosol	18.83	10.39
CDY66337	Canola	cytosol	18.65	10.3
CDY29508	Canola	cytosol	18.65	10.27
CDY01356	Canola	cytosol	18.1	10.1
CDY33644	Canola	cytosol	17.73	9.76
CDY00394	Canola	cytosol	19.38	9.27
CDY38814	Canola	cytosol	19.38	9.27
CDY08192	Canola	cytosol	19.56	9.2
CDY04654	Canola	cytosol	19.56	9.09
CDX96582	Canola	cytosol	18.83	9.01
CDY01320	Canola	cytosol	19.2	8.89

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.268.20	Gene3D:3.40.50.300	MapMan:35.1	GO:A0A078DZE9	EnsemblPlants:CDX94536
ProteinID:CDX94536	ProteinID:CDX94536.1	ncoils:Coil	InterPro:Dynamin_SF	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom
InterPro:EHD_N	InterPro:EH_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005515	GO:GO:0005525	EnsemblPlantsGene:GSBRNA2T00157780001	InterPro:G_DYNAMIN_dom	InterPro:IPR000261	InterPro:IPR002048
InterPro:IPR030381	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF12763	PFAM:PF16880	PFscan:PS50031
PFscan:PS50222	PFscan:PS51718	PANTHER:PTHR11216	PANTHER:PTHR11216:SF76	SMART:SM00027	SMART:SM00054
SUPFAM:SSF47473	SUPFAM:SSF52540	UniParc:UPI0004EEEB5C	:	:	:

Description

BnaC09g23000D

Coordinates

chrLK031882:-:860091..863615

Molecular Weight (calculated)

61482.5 Da

IEP (calculated)

7.266

GRAVY (calculated)

-0.285

Length

547 amino acids

Sequence
(BLAST)

001: METSSAISIG TCLKEHQKIY KEWFNIADSD GDGRVSGNDA TKFFAMSKLS RQELKQVWAV ADSKRQGFLG LTEFITAMKL VTLAQEGHEI TSDLLKGSVD
101: MKTVELPVLE GLENVVVSKQ KASKAYAVDE DNVVTQPQAV TAKAPWFKSK AIIKPQVNVV TIVDGLKRLY AEKLKPLEVT YRFNDFASPV LTNSDFDAKP
201: MVMLLGQYST GKTTFIKHLL GCEYPGAHIG PEPTTDRFVV AMSGPDERTI PGNTMAVQAD MPFNGLTSFG GAFLSKFECS QMPHPLLDQI TLVDTPGVLS
301: GEKQRMQRSY DFTGVISWFA SKCDMILLLF DPHKLDISDE FKRVITSLRG NEDKIRVVLN KADQVDTQQL MRVYGALMWS LGKVLNTPEV VRVYIGSFND
401: KPINEAVVGP IGKELFEKEQ NDLITDLMTI PKKACDRKIN EFVKRARAAK INAYIMSHLK KEMPAMMGKS KAQQRLMDNL QQEFEKVQQE YHLPAGDFPS
501: VEHFREVLGG YNIDKFEKLK PKMIQAVDDM LGYDIPDLLK KFRNPYE

Best Arabidopsis Sequence Match ( AT4G05520.1 )
(BLAST)

001: METSSTISIG SCLKEHQKIY KEWFNIADSD GDGRVSGNDA TKFFAMSKLS RQELKQVWAV ADSKRQGFLG LSEFITAMKL VSLAQEGHEI TSDLLKGSID
101: MKSVELPVLE GLENVVSKQK VSKTNVDVED NVVTKPQVTA KTPWFKSKSI IKPQVNVVTI VDGLKRLYTE KLKPLEVTYR FNDFASPVLT SSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLGC DYPGAHIGPE PTTDRFVVAM SGPDERTIPG NTMAVQADMP FNGLTSFGGA FLSKFECSQM PHPVLDQITL VDTPGVLSGE
301: KQRMQRSYDF TGVISWFASK CDMILLLFDP HKLDISDEFK RVITSLRGNE DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVVR VYIGSFNDKP
401: INEVAVGPIG KELFEKEQND LLADLMDVPK KACDRKINEF VKRARSAKIN AYIMSHLKKE MPAMMGKSKA QQRLMDNLEE EFGKVQREFH LPAGDFPSVE
501: HFREVLGGYN IDKFEKLKPK MIQAVDDMLG YDIPDLLKKF RNPYDN

Arabidopsis Description

EHD2EH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:B3LF48]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.