Factsheet for HORVU0Hr1G015420.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G159700.1	Wheat	cytosol	89.37	98.35
TraesCS6D01G121200.1	Wheat	cytosol	89.04	97.99
TraesCS6A01G131300.2	Wheat	cytosol, plastid	96.68	97.82
HORVU7Hr1G060580.1	Barley	cytosol, plastid	65.12	90.11
Os02t0158100-01	Rice	cytosol	81.06	89.87
OQU84412	Sorghum	cytosol	80.4	88.48
Zm00001d053858_P001	Maize	cytosol, extracellular	79.9	87.93
PGSC0003DMT400034517	Potato	cytosol	38.87	81.53
VIT_00s0516g00020.t01	Wine grape	cytosol	72.76	79.64
GSMUA_Achr5P23200_001	Banana	cytosol	69.44	77.26
KRH36524	Soybean	cytosol	68.6	76.62
KRH51151	Soybean	cytosol	69.27	76.51
KRH02006	Soybean	cytosol	69.1	76.33
KRH11510	Soybean	cytosol	68.27	76.25
AT4G05520.1	Thale cress	cytosol	68.44	75.46
CDY16689	Canola	cytosol	68.44	75.46
Bra029477.1-P	Field mustard	cytosol	68.44	75.46
CDX94536	Canola	cytosol	68.27	75.14
Solyc11g012020.1.1	Tomato	cytosol	66.78	73.49
HORVU7Hr1G100500.8	Barley	cytosol, plastid	75.25	71.34
HORVU2Hr1G122390.1	Barley	cytosol	63.46	69.71
GSMUA_Achr5P23220_001	Banana	cytosol	57.48	68.38
KRH45544	Soybean	cytosol	20.76	53.42
HORVU4Hr1G082280.2	Barley	cytosol	19.1	10.17
HORVU7Hr1G121230.4	Barley	cytosol	15.12	7.02

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.268.20	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A287E289	ncoils:Coil
InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:EHD_N	InterPro:EH_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005525	InterPro:GTP_binding_domain	InterPro:G_DYNAMIN_dom
EnsemblPlantsGene:HORVU0Hr1G015420	EnsemblPlants:HORVU0Hr1G015420.3	InterPro:IPR000261	InterPro:IPR002048	InterPro:IPR030381	InterPro:P-loop_NTPase
PFAM:PF01926	PFAM:PF12763	PFAM:PF16880	PFscan:PS50031	PFscan:PS50222	PFscan:PS51718
PANTHER:PTHR11216	PANTHER:PTHR11216:SF114	SMART:SM00027	SUPFAM:SSF47473	SUPFAM:SSF52540	UniParc:UPI000B46BF88
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchrUn:+:84254794..84259253

Molecular Weight (calculated)

67323.9 Da

IEP (calculated)

8.817

GRAVY (calculated)

-0.386

Length

602 amino acids

Sequence
(BLAST)

001: GPRFQMPPHS TPKRGRRDEH PHPHPHPVRF PFVHSCCRCC SRQPPPPPTR GGRPWMEIAR SVASLGCSKE HQRIYADWFA LADPDGDGRV TGADATKFFA
101: MSGLSRADLK QVWAIADSKR QGYLGFGEFA AAMQLVSLAQ AGNEITQDSL KREDLSSFDP PVMKGLDELL ARSMAIVNVV RPQENGTSQV QAPSTNSWFS
201: SKSSKKIQTP LTAVTSVIDG LKRLYIEKLK PLEVAYRFND FASPLLTNSD FDAKPMVMLL GQYSTGKTTF IKHLLKTNFP GAHIGPEPTT DRFVVVMSGS
301: DERTVPGNTI AVQADMPFNG LTTFGGAFLS KFECSQMPHP LLDHITFVDT PGVLSGEKQR TQRSYDFTGV TSWFAAKCDV ILLLFDPHKL DISDEFKRVI
401: SSLRGNEDKI RVVLNKADQV DTQQLMRVYG ALMWSLGKVL NTPEVMRVYI GSFNDKPVNE SAVGPIGKEL FEKEQEDLLA DLKDIPKKAC DRRVNEFVKR
501: ARAAKIHAYI IGQLKKEMPA MIGKAKAQQR LIDNLQDEFA KVQREYHLPA GDFPDVEHFK QVLAGYSIDK FEKIKPKMVQ AVDDMLAHDI PDLLKNFSNP
601: YQ

Best Arabidopsis Sequence Match ( AT3G20290.3 )
(BLAST)

001: MEIESVAAGS CSKENQMIYK EWFEFSDSDG DGRITGNDAI KFFTMSNLPR PELKQIWAIA DSKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLISDVDF
101: KNINPPTMEG LGVLMAKKKH SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE
301: KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP
401: INEAATGPIG RELFEKEQDD LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED EFGKVQREHH LPKGDFPNVD
501: HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF KNPYD

Arabidopsis Description

EHD1EHD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VAZ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.