Factsheet for HORVU7Hr1G060580.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

mitochondrion 1
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU0Hr1G015420.3	Barley	cytosol, plastid	90.11	65.12
TraesCS6A01G131300.2	Wheat	cytosol, plastid	87.36	63.87
TraesCS6B01G159700.1	Wheat	cytosol	77.24	61.43
TraesCS6D01G121200.1	Wheat	cytosol	76.55	60.88
Os02t0158100-01	Rice	cytosol	69.43	55.62
OQU84412	Sorghum	cytosol	68.05	54.11
Zm00001d053858_P001	Maize	cytosol, extracellular	67.59	53.75
KRH45544	Soybean	cytosol	26.44	49.15
VIT_00s0516g00020.t01	Wine grape	cytosol	59.54	47.09
GSMUA_Achr5P23200_001	Banana	cytosol	57.24	46.03
KRH51151	Soybean	cytosol	57.47	45.87
KRH36524	Soybean	cytosol	56.78	45.83
KRH02006	Soybean	cytosol	57.24	45.69
KRH11510	Soybean	cytosol	56.09	45.27
HORVU7Hr1G100500.8	Barley	cytosol, plastid	65.29	44.72
CDY16689	Canola	cytosol	55.4	44.14
Bra029477.1-P	Field mustard	cytosol	55.4	44.14
AT4G05520.1	Thale cress	cytosol	55.17	43.96
CDX94536	Canola	cytosol	55.17	43.88
Solyc11g012020.1.1	Tomato	cytosol	54.94	43.69
GSMUA_Achr5P23220_001	Banana	cytosol	50.11	43.08
HORVU2Hr1G122390.1	Barley	cytosol	53.1	42.15
PGSC0003DMT400034517	Potato	cytosol	17.24	26.13
HORVU4Hr1G082280.2	Barley	cytosol	16.55	6.37
HORVU7Hr1G121230.4	Barley	cytosol	13.33	4.48

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.268.20	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A287WNN1	ncoils:Coil
InterPro:Dynamin_SF	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:EHD_N	InterPro:EH_dom	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005525	InterPro:G_DYNAMIN_dom
EnsemblPlantsGene:HORVU7Hr1G060580	EnsemblPlants:HORVU7Hr1G060580.1	InterPro:IPR000261	InterPro:IPR002048	InterPro:IPR030381	InterPro:P-loop_NTPase
PFAM:PF00350	PFAM:PF12763	PFAM:PF16880	PFscan:PS50031	PFscan:PS50222	PFscan:PS51718
PANTHER:PTHR11216	PANTHER:PTHR11216:SF114	SMART:SM00027	SUPFAM:SSF47473	SUPFAM:SSF52540	UniParc:UPI000B47372F
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:278845429..278848603

Molecular Weight (calculated)

44290.9 Da

IEP (calculated)

8.668

GRAVY (calculated)

-0.331

Length

435 amino acids

Sequence
(BLAST)

001: MPPHSTPKRG RRDEHPHPHP HPVRFPFVHS CCRCCSRQPP PPPTRGGRPW MEIARSVASL GCSKEHQRIY ADWFALADPD GDGRVTGADA TKFFAMSGLS
101: RADLNKVWAI ADSKRQGYLG FGEFAAAMQL VSLAQAGNEI TQDSLKREDL SSFDPPVMKG LDELLARSMA IVNVVRPQEN GTSQVQAPST NSWFSSKSSK
201: KIQTPLTAVT SVIDGLKRLY IEKLKPLEVA YRFNDFASPL LTNSDFDAKP MVMLLGQYST GKTTFIKHLL KTNFPGAHIG PEPTTDRFVV VMSGSDERTV
301: PGNTIAVQAD MPFNGLTTFG GAFLSKFECS QMPHPLLDHI TFVDTPGVLS GEKQRTQRSY DFTGVTSWFA AKCDVILLLF DPHKLXXXXX XXXXXXXXXX
401: XXXXXXXXXX XXXXXXXXXG RHEGFRNGPE TKIDI

Best Arabidopsis Sequence Match ( AT3G20290.1 )
(BLAST)

001: MEIESVAAGS CSKENQMIYK EWFEFSDSDG DGRITGNDAI KFFTMSNLPR PELKQIWAIA DSKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLISDVDF
101: KNINPPTMEG LGVLMAKKKH SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE
301: KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP
401: INEAATGPIG RELFEKEQDD LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED EFGKVQREHH LPKGDFPNVD
501: HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF KNPYD

Arabidopsis Description

EHD1EHD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VAZ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.