CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053858_P001	Maize	cytosol, extracellular	97.08	97.08
Os02t0158100-01	Rice	cytosol	90.13	90.79
TraesCS6B01G159700.1	Wheat	cytosol	89.03	89.03
TraesCS6D01G121200.1	Wheat	cytosol	88.85	88.85
EER88852	Sorghum	cytosol	84.46	84.93
PGSC0003DMT400034517	Potato	cytosol	44.06	83.97
TraesCS6A01G131300.2	Wheat	cytosol, plastid	88.67	81.51
HORVU0Hr1G015420.3	Barley	cytosol, plastid	88.48	80.4
VIT_00s0516g00020.t01	Wine grape	cytosol	80.26	79.82
GSMUA_Achr5P23200_001	Banana	cytosol	76.97	77.82
KRH36524	Soybean	cytosol	75.87	76.99
KRH11510	Soybean	cytosol	75.87	76.99
KRH02006	Soybean	cytosol	76.6	76.88
KRH51151	Soybean	cytosol	76.23	76.51
CDX94536	Canola	cytosol	75.5	75.5
CDY16689	Canola	cytosol	75.32	75.46
Bra029477.1-P	Field mustard	cytosol	75.32	75.46
AT4G05520.1	Thale cress	cytosol	74.77	74.91
Solyc11g012020.1.1	Tomato	cytosol	74.22	74.22
EES11620	Sorghum	cytosol	71.66	72.32
GSMUA_Achr5P23220_001	Banana	cytosol	63.99	69.17
HORVU7Hr1G060580.1	Barley	cytosol, plastid	54.11	68.05
KRH45544	Soybean	cytosol	23.4	54.7
EER92924	Sorghum	cytosol	18.46	9.67
EER89004	Sorghum	cytosol	18.46	8.24

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.268.20	Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:8076084	UniProt:A0A1Z5RKZ2
ncoils:Coil	InterPro:Dynamin_SF	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:EHD_N	InterPro:EH_dom
GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005525
InterPro:G_DYNAMIN_dom	InterPro:IPR000261	InterPro:IPR002048	InterPro:IPR030381	EnsemblPlants:OQU84412	ProteinID:OQU84412
ProteinID:OQU84412.1	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF12763	PFAM:PF16880	PFscan:PS50031
PFscan:PS50222	PFscan:PS51718	PANTHER:PTHR11216	PANTHER:PTHR11216:SF114	SMART:SM00027	EnsemblPlantsGene:SORBI_3004G047100
SUPFAM:SSF47473	SUPFAM:SSF52540	UniParc:UPI0001A85A58	RefSeq:XP_002453335.1	:	:

Description

hypothetical protein

Coordinates

chr4:-:3834744..3839043

Molecular Weight (calculated)

60873.2 Da

IEP (calculated)

7.037

GRAVY (calculated)

-0.262

Length

547 amino acids

Sequence
(BLAST)

001: MEIARAAAGV ACSKEHQRIY AEWFALADPD GDGRVTGADA TSFFGMSALS RADLKQVWAI ADSKRQGYLG FAEFVTAMQL VSLAQAGNEI TEDSLKREDL
101: STLDPPVMEG VDGLLARSKA VVKRIHPDDN GTAQVQAPSM YHWFGSKAAQ KVQMPLTAVT SVIDGLKRLY VEKLKPLEVA YRYNDFASPL LTNSDFDAKP
201: MVMLLGQYST GKTTFIKHLL KTSYPGAHVG PEPTTDRFVV VMSGSDGRTI PGNTIAVQAD MPFTGLTTFG GAFLSKFECS QMPHPLLEHI TFVDTPGVLS
301: GEKQRTQRSY DFTGVTSWFA AKCDLILLLF DPHKLDISDE FKRVISSLRG HDDKIRVVLN KADQVDTQQL MRVYGALMWS LGKVLNTPEV VRVYIGSFND
401: KPVNDSAVGP IGKDLFEREQ DDLLCDLKDI PKKACDRRVN EFVKRARAAK IHAYIIGHLK KEMPAMMGKA KAQQRLIDNL GEEFAKVQRE YHLPAGDFPD
501: VEHFKQVLGG YSIDKFEKLK PKMVQAVDDM LAHDIPELLK NFRNPYE

Best Arabidopsis Sequence Match ( AT3G20290.3 )
(BLAST)

001: MEIESVAAGS CSKENQMIYK EWFEFSDSDG DGRITGNDAI KFFTMSNLPR PELKQIWAIA DSKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLISDVDF
101: KNINPPTMEG LGVLMAKKKH SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE
301: KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP
401: INEAATGPIG RELFEKEQDD LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED EFGKVQREHH LPKGDFPNVD
501: HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF KNPYD

Arabidopsis Description

EHD1EHD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VAZ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.