CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014526_P002	Maize	cytosol	97.61	97.08
Os06t0687800-01	Rice	plasma membrane	91.54	91.54
TraesCS7D01G430800.1	Wheat	cytosol	90.26	90.09
TraesCS7A01G441500.1	Wheat	cytosol	90.07	89.91
TraesCS7B01G340200.2	Wheat	cytosol	89.89	89.72
OQU84412	Sorghum	cytosol	84.93	84.46
PGSC0003DMT400034517	Potato	cytosol	43.01	81.53
VIT_00s0516g00020.t01	Wine grape	cytosol	81.99	81.09
GSMUA_Achr5P23200_001	Banana	cytosol	80.51	80.96
KRH02006	Soybean	cytosol	79.23	79.08
KRH51151	Soybean	cytosol	79.04	78.9
KRH11510	Soybean	cytosol	77.39	78.11
KRH36524	Soybean	cytosol	77.21	77.92
EES11620	Sorghum	cytosol	75.92	76.2
AT4G05520.1	Thale cress	cytosol	75.92	75.64
Solyc11g012020.1.1	Tomato	cytosol	75.55	75.14
CDY16689	Canola	cytosol	75.37	75.09
Bra029477.1-P	Field mustard	cytosol	75.37	75.09
CDX94536	Canola	cytosol	74.82	74.41
HORVU7Hr1G100500.8	Barley	cytosol, plastid	86.21	73.86
GSMUA_Achr5P23220_001	Banana	cytosol	64.71	69.57
KRH45544	Soybean	cytosol	24.26	56.41
EER92924	Sorghum	cytosol	19.12	9.95
EER89004	Sorghum	cytosol	17.83	7.91

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.268.20	Gene3D:3.40.50.300	MapMan:35.1	EntrezGene:8065100	UniProt:C5Z8C6
InterPro:Dynamin_SF	EnsemblPlants:EER88852	ProteinID:EER88852	ProteinID:EER88852.1	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom
InterPro:EHD_N	InterPro:EH_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005515	GO:GO:0005525	InterPro:G_DYNAMIN_dom	InterPro:IPR000261	InterPro:IPR002048	InterPro:IPR030381
InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF12763	PFAM:PF16880	PFscan:PS50031	PFscan:PS50222
PFscan:PS51718	PANTHER:PTHR11216	PANTHER:PTHR11216:SF114	SMART:SM00027	SMART:SM00054	EnsemblPlantsGene:SORBI_3010G238700
SUPFAM:SSF47473	SUPFAM:SSF52540	unigene:Sbi.9490	UniParc:UPI0001A890D4	RefSeq:XP_002437485.1	:

Description

hypothetical protein

Coordinates

chr10:+:58075623..58081038

Molecular Weight (calculated)

61519.1 Da

IEP (calculated)

7.688

GRAVY (calculated)

-0.365

Length

544 amino acids

Sequence
(BLAST)

001: MEIGQYPVSS CSKEHQKIYQ EWFALADADG DGRITGPDAI KFFGMSKLSR PDLKQVWAIS DTRRQGYLGF PEFVTAMQLV SLAQAGNEIT QDSLKRDDLI
101: SLNPPVMEGL DALLAKSKHL VKRVDPEMDG YPQEQSTLTN KWFSSKSSKK IPLTAVTSVI DGLKKLYIEK LKPLEVTYKF NDFVSPLLTS SDFDAKPMVM
201: LLGQYSTGKT TFIKHLLRTS YPGAHIGPEP TTDRFVVVMS GPDERTIPGN TIAVQADMPF SGLTTFGTAF LSKFECSQMR HPLLEHITFV DTPGVLSGEK
301: QRTQRSYDFT GVTSWFAAKC DLILLLFDPH KLDISDEFKR VIGSLRGHDD KIRVVLNKAD QVDTQQLMRV YGALMWSLGK VLNTPEVSRV YIGSFNDKPV
401: NESAVGPLGK ELFEREQDDL LSDLKDIPKK ACDRRINEFV KRARAAKIHA YIIGHLKKEM PTMMGKAKAQ QRLIDNLPDE FAKVQREYHL PSGDFPYVEH
501: FKEVLSGYSF DKFEKVKPKM IQAVDDMLGY DIPELLKNFR NPYE

Best Arabidopsis Sequence Match ( AT3G20290.3 )
(BLAST)

001: MEIESVAAGS CSKENQMIYK EWFEFSDSDG DGRITGNDAI KFFTMSNLPR PELKQIWAIA DSKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLISDVDF
101: KNINPPTMEG LGVLMAKKKH SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE
301: KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP
401: INEAATGPIG RELFEKEQDD LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED EFGKVQREHH LPKGDFPNVD
501: HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF KNPYD

Arabidopsis Description

EHD1EHD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VAZ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.