Factsheet for Bra029477.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16689	Canola	cytosol	99.82	99.82
AT4G05520.1	Thale cress	cytosol	93.41	93.41
PGSC0003DMT400034517	Potato	cytosol	43.77	83.28
VIT_00s0516g00020.t01	Wine grape	cytosol	78.57	78.0
Os02t0158100-01	Rice	cytosol	76.19	76.61
Os06t0687800-01	Rice	plasma membrane	75.64	75.92
KRH11510	Soybean	cytosol	74.91	75.88
KRH36524	Soybean	cytosol	74.91	75.88
GSMUA_Achr4P20130_001	Banana	cytosol	75.46	75.87
TraesCS6B01G159700.1	Wheat	cytosol	75.82	75.69
TraesCS6D01G121200.1	Wheat	cytosol	75.64	75.5
EER88852	Sorghum	cytosol	75.09	75.37
OQU84412	Sorghum	cytosol	75.46	75.32
KRH02006	Soybean	cytosol	74.91	75.05
KRH51151	Soybean	cytosol	74.73	74.86
TraesCS7D01G430800.1	Wheat	cytosol	74.73	74.86
TraesCS7A01G441500.1	Wheat	cytosol	74.54	74.68
TraesCS7B01G340200.2	Wheat	cytosol	74.54	74.68
Zm00001d053858_P001	Maize	cytosol, extracellular	74.54	74.41
Zm00001d014526_P002	Maize	cytosol	73.99	73.86
GSMUA_Achr5P23200_001	Banana	cytosol	72.89	73.57
Bra035794.1-P	Field mustard	cytosol	69.96	72.76
Solyc11g012020.1.1	Tomato	cytosol	72.16	72.03
Os04t0669300-01	Rice	plasma membrane	71.06	71.59
EES11620	Sorghum	cytosol	70.15	70.66
TraesCS6A01G131300.2	Wheat	cytosol, plastid	75.64	69.41
HORVU0Hr1G015420.3	Barley	cytosol, plastid	75.46	68.44
Bra038259.1-P	Field mustard	cytosol	71.06	68.07
TraesCS2D01G544000.1	Wheat	cytosol	67.4	67.4
TraesCS2B01G572600.1	Wheat	cytosol	67.22	67.22
HORVU2Hr1G122390.1	Barley	cytosol	67.22	66.97
TraesCS2A01G542800.1	Wheat	cytosol	66.85	66.85
GSMUA_Achr5P23220_001	Banana	cytosol	60.62	65.42
GSMUA_Achr3P01050_001	Banana	cytosol, plastid	73.81	64.38
HORVU7Hr1G100500.8	Barley	cytosol, plastid	71.61	61.57
Zm00001d001906_P004	Maize	cytosol	67.58	58.02
HORVU7Hr1G060580.1	Barley	cytosol, plastid	44.14	55.4
KRH45544	Soybean	cytosol	23.26	54.27
GSMUA_Achr3P20110_001	Banana	cytosol	15.2	52.87
Bra025842.1-P	Field mustard	cytosol	19.05	10.37
Bra012247.1-P	Field mustard	cytosol	17.95	9.8
Bra012288.1-P	Field mustard	cytosol	18.68	9.0
Bra016413.1-P	Field mustard	cytosol	18.5	8.86
Bra016455.1-P	Field mustard	nucleus, plastid	18.13	8.72
Bra017933.1-P	Field mustard	cytosol	18.86	8.35

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.268.20	Gene3D:3.40.50.300	MapMan:35.1	EnsemblPlantsGene:Bra029477	EnsemblPlants:Bra029477.1
EnsemblPlants:Bra029477.1-P	ncoils:Coil	InterPro:Dynamin_SF	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:EHD_N
InterPro:EH_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005886
GO:GO:0006810	GO:GO:0006897	GO:GO:0008150	GO:GO:0009506	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0032956	GO:GO:0043231	GO:GO:0051260	InterPro:G_DYNAMIN_dom	InterPro:IPR000261
InterPro:IPR002048	InterPro:IPR030381	UniProt:M4EL10	InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF12763
PFAM:PF16880	PFscan:PS50031	PFscan:PS50222	PFscan:PS51718	PANTHER:PTHR11216	PANTHER:PTHR11216:SF76
SMART:SM00027	SMART:SM00054	SUPFAM:SSF47473	SUPFAM:SSF52540	UniParc:UPI0002542716	:

Description

AT4G05520 (E=5e-301) ATEHD2 | ATEHD2 (EPS15 HOMOLOGY DOMAIN 2); GTP binding / GTPase/ calcium ion binding

Coordinates

chrA09:+:17712895..17716092

Molecular Weight (calculated)

61501.5 Da

IEP (calculated)

6.799

GRAVY (calculated)

-0.309

Length

546 amino acids

Sequence
(BLAST)

001: METSSAISMG TCLKEHQKIY KEWFNIADSD GDGRVSGNDA TKFFAMSKLS RQELKQVWAV ADSKRQGFLG LTEFITAMKL VTLAQEGHEI TSDLLKGSVD
101: LMSVELPVLE GLENVVSKQK ASKAYADDED NVVTQPQVVK EKAPWFKSKA IIKPQVNVVT IVDGLKRLYA EKLKPLEVTY RFNDFASPVL TNSDFDAKPM
201: VMLLGQYSTG KTTFIKHLLG CEYPGAHIGP EPTTDRFVVA MSGPDERTIP GNTMAVQADM PFNGLTSFGG AFLSKFECSQ MPHPLLDQIT LVDTPGVLSG
301: EKQRMQRSYD FTGVISWFAS KCDMILLLFD PHKLDISDEF KRVITSLRGN EDKIRVVLNK ADQVDTQQLM RVYGALMWSL GKVLNTPEVV RVYIGSFNDK
401: PINEAVVGPI GKELFEKEQN DLITDLMTIP KKACDRKINE FVKRARAAKI NAYIMSHLKK EMPAMMGKSK AQQRLMDNLQ QEFEKVQQEY HLPAGDFPSV
501: EHFREVLGGY NIDKFEKLKP KMIQAVDDML GYDIPDLLKK FRNPYE

Best Arabidopsis Sequence Match ( AT4G05520.1 )
(BLAST)

001: METSSTISIG SCLKEHQKIY KEWFNIADSD GDGRVSGNDA TKFFAMSKLS RQELKQVWAV ADSKRQGFLG LSEFITAMKL VSLAQEGHEI TSDLLKGSID
101: MKSVELPVLE GLENVVSKQK VSKTNVDVED NVVTKPQVTA KTPWFKSKSI IKPQVNVVTI VDGLKRLYTE KLKPLEVTYR FNDFASPVLT SSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLGC DYPGAHIGPE PTTDRFVVAM SGPDERTIPG NTMAVQADMP FNGLTSFGGA FLSKFECSQM PHPVLDQITL VDTPGVLSGE
301: KQRMQRSYDF TGVISWFASK CDMILLLFDP HKLDISDEFK RVITSLRGNE DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVVR VYIGSFNDKP
401: INEVAVGPIG KELFEKEQND LLADLMDVPK KACDRKINEF VKRARSAKIN AYIMSHLKKE MPAMMGKSKA QQRLMDNLEE EFGKVQREFH LPAGDFPSVE
501: HFREVLGGYN IDKFEKLKPK MIQAVDDMLG YDIPDLLKKF RNPYDN

Arabidopsis Description

EHD2EH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:B3LF48]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.