Factsheet for Bra035794.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25408	Canola	cytosol	99.24	99.24
AT3G20290.1	Thale cress	cytosol	93.52	90.09
Bra038259.1-P	Field mustard	cytosol	93.9	86.49
VIT_19s0090g01130.t01	Wine grape	cytosol	83.81	80.73
KRH73798	Soybean	cytosol	81.9	78.32
PGSC0003DMT400033476	Potato	cytosol	80.57	77.61
Solyc12g014460.1.1	Tomato	cytosol	80.38	77.43
Solyc07g064910.2.1	Tomato	cytosol	80.19	77.25
PGSC0003DMT400057437	Potato	cytosol	80.19	77.25
GSMUA_Achr3P20100_001	Banana	cytosol, endoplasmic reticulum	63.05	76.98
PGSC0003DMT400037353	Potato	cytosol	77.52	74.95
Solyc10g006110.2.1	Tomato	cytosol	76.76	74.22
KRG98685	Soybean	cytosol	76.19	73.94
Bra029477.1-P	Field mustard	cytosol	72.76	69.96
Bra025842.1-P	Field mustard	cytosol	20.38	10.67
Bra012247.1-P	Field mustard	cytosol	19.43	10.2
Bra012288.1-P	Field mustard	cytosol	21.14	9.8
Bra016413.1-P	Field mustard	cytosol	20.38	9.39
Bra016455.1-P	Field mustard	nucleus, plastid	19.05	8.81
Bra017933.1-P	Field mustard	cytosol	20.0	8.52

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.268.20	Gene3D:3.40.50.300	MapMan:35.1	EnsemblPlantsGene:Bra035794	EnsemblPlants:Bra035794.1
EnsemblPlants:Bra035794.1-P	ncoils:Coil	InterPro:Dynamin_SF	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:EHD_N
InterPro:EH_dom	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509	GO:GO:0005515
GO:GO:0005525	InterPro:G_DYNAMIN_dom	InterPro:IPR000261	InterPro:IPR002048	InterPro:IPR030381	UniProt:M4F3Z4
InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF12763	PFAM:PF16880	PFscan:PS50031	PFscan:PS50222
PFscan:PS51718	PANTHER:PTHR11216	PANTHER:PTHR11216:SF114	SMART:SM00027	SMART:SM00054	SUPFAM:SSF47473
SUPFAM:SSF52540	UniParc:UPI0002547B0B	SEG:seg	:	:	:

Description

AT3G20290 (E=1e-180) ATEHD1 | ATEHD1 (EPS15 HOMOLOGY DOMAIN 1); GTP binding / GTPase/ calcium ion binding

Coordinates

chrA05:+:17241182..17244495

Molecular Weight (calculated)

58904.8 Da

IEP (calculated)

6.892

GRAVY (calculated)

-0.298

Length

525 amino acids

Sequence
(BLAST)

001: MEIDSVAAGS CSKENQIIYK DWFEFADSDG DGRITGSDAI KFFSMSNLPR PELKQVWAIA DAKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLHSDAVD
101: FKNMNPPVMD GLIVLMAKKK KHSPKSSDPN GSPAADASLT AHWFSSKSSK KISLSSVTSI IDGLKRLYIQ KLKPLEVAYQ FNDFVSPLLT NSDFDAKPMV
201: MLLGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTSFGTA FLSKFECSQM PHPLLEHITF VDTPGVLSGE KQRTQRAYEF TGVTSWFASK
301: CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVAR VYIGSFSDKP INEVSTGPIG RELFEMEQED
401: LLSDLKNIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLLDNLED VFGKVQREHH LPKGDFPNVD QFREVLSGYN FDNFEKLKPK
501: MLQTVDDMLG YDIPELLKNF KNPYD

Best Arabidopsis Sequence Match ( AT3G20290.3 )
(BLAST)

001: MEIESVAAGS CSKENQMIYK EWFEFSDSDG DGRITGNDAI KFFTMSNLPR PELKQIWAIA DSKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLISDVDF
101: KNINPPTMEG LGVLMAKKKH SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE
301: KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP
401: INEAATGPIG RELFEKEQDD LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED EFGKVQREHH LPKGDFPNVD
501: HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF KNPYD

Arabidopsis Description

EHD1EHD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VAZ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.