Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 1
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29816 | Canola | cytosol | 90.64 | 93.92 |
| CDY25408 | Canola | cytosol | 90.46 | 93.9 |
| CDY50093 | Canola | cytosol | 91.38 | 93.79 |
| Bra035794.1-P | Field mustard | cytosol | 90.09 | 93.52 |
| CDY50090 | Canola | cytosol | 91.93 | 87.89 |
| Bra038259.1-P | Field mustard | cytosol | 91.74 | 87.72 |
| VIT_19s0090g01130.t01 | Wine grape | cytosol | 85.69 | 85.69 |
| KRH73798 | Soybean | cytosol | 84.04 | 83.42 |
| GSMUA_Achr3P20100_001 | Banana | cytosol, endoplasmic reticulum | 65.32 | 82.79 |
| PGSC0003DMT400033476 | Potato | cytosol | 81.83 | 81.83 |
| Solyc07g064910.2.1 | Tomato | cytosol | 81.83 | 81.83 |
| Solyc12g014460.1.1 | Tomato | cytosol | 81.83 | 81.83 |
| PGSC0003DMT400057437 | Potato | cytosol | 81.47 | 81.47 |
| PGSC0003DMT400037353 | Potato | cytosol | 79.08 | 79.37 |
| Solyc10g006110.2.1 | Tomato | cytosol | 78.53 | 78.82 |
| KRG98685 | Soybean | cytosol | 78.17 | 78.74 |
| AT4G05520.1 | Thale cress | cytosol | 75.6 | 75.46 |
| AT1G20760.1 | Thale cress | cytosol | 19.27 | 10.3 |
| AT1G21630.2 | Thale cress | cytosol | 19.82 | 8.66 |
Protein Annotations
| Gene3D:1.10.238.10 | Gene3D:1.10.268.20 | Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:821573 | UniProt:A0A178VAZ5 |
| ProteinID:AEE76359.1 | ProteinID:AEE76360.1 | EMBL:AK317308 | ProteinID:ANM65913.1 | ArrayExpress:AT3G20290 | EnsemblPlantsGene:AT3G20290 |
| RefSeq:AT3G20290 | TAIR:AT3G20290 | RefSeq:AT3G20290-TAIR-G | EnsemblPlants:AT3G20290.1 | TAIR:AT3G20290.1 | Symbol:ATEHD1 |
| EMBL:AY034911 | Unigene:At.8171 | ProteinID:BAB02809.1 | EMBL:BT004414 | ncoils:Coil | InterPro:Dynamin_SF |
| InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:EHD_N | InterPro:EH_dom | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005768 | GO:GO:0005886 | GO:GO:0006810 |
| GO:GO:0006897 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009506 | GO:GO:0009628 | GO:GO:0009987 |
| GO:GO:0010008 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0016787 | GO:GO:0032456 | GO:GO:0042538 |
| GO:GO:0043231 | GO:GO:0051260 | InterPro:G_DYNAMIN_dom | InterPro:IPR000261 | InterPro:IPR002048 | InterPro:IPR030381 |
| RefSeq:NP_001030731.1 | RefSeq:NP_001327849.1 | RefSeq:NP_566657.1 | ProteinID:OAP03490.1 | InterPro:P-loop_NTPase | PFAM:PF00350 |
| PFAM:PF12763 | PFAM:PF16880 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| PFscan:PS50031 | PFscan:PS50222 | PFscan:PS51718 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF114 | UniProt:Q94CF0 |
| SMART:SM00027 | SMART:SM00054 | SUPFAM:SSF47473 | SUPFAM:SSF52540 | UniParc:UPI000000C353 | SEG:seg |
Description
EHD1EHD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VAZ5]
Coordinates
chr3:-:7074817..7079014
Molecular Weight (calculated)
61233.6 Da
IEP (calculated)
7.473
GRAVY (calculated)
-0.354
Length
545 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIESVAAGS CSKENQMIYK EWFEFSDSDG DGRITGNDAI KFFTMSNLPR PELKQIWAIA DSKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLISDVDF
101: KNINPPTMEG LGVLMAKKKH SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE
301: KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP
401: INEAATGPIG RELFEKEQDD LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED EFGKVQREHH LPKGDFPNVD
501: HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF KNPYD
101: KNINPPTMEG LGVLMAKKKH SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE
301: KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP
401: INEAATGPIG RELFEKEQDD LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED EFGKVQREHH LPKGDFPNVD
501: HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF KNPYD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.