CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P20110_001	Banana	cytosol	31.62	47.13
KRH36524	Soybean	cytosol	73.5	31.91
KRH11510	Soybean	cytosol	71.79	31.17
KRH02006	Soybean	cytosol	66.24	28.44
KRH51151	Soybean	cytosol	65.81	28.26
HORVU7Hr1G060580.1	Barley	cytosol, plastid	49.15	26.44
KRH74100	Soybean	cytosol	14.96	26.32
VIT_00s0516g00020.t01	Wine grape	cytosol	59.83	25.45
Os02t0158100-01	Rice	cytosol	56.41	24.31
EER88852	Sorghum	cytosol	56.41	24.26
Os06t0687800-01	Rice	plasma membrane	55.98	24.08
Zm00001d014526_P002	Maize	cytosol	55.98	23.95
Solyc11g012020.1.1	Tomato	cytosol	55.98	23.95
TraesCS7D01G430800.1	Wheat	cytosol	55.13	23.67
AT4G05520.1	Thale cress	cytosol	55.13	23.63
TraesCS7A01G441500.1	Wheat	cytosol	54.7	23.49
CDY16689	Canola	cytosol	54.7	23.44
CDX94536	Canola	cytosol	54.7	23.4
OQU84412	Sorghum	cytosol	54.7	23.4
GSMUA_Achr4P20130_001	Banana	cytosol	54.27	23.39
KRH73798	Soybean	cytosol	54.7	23.32
TraesCS7B01G340200.2	Wheat	cytosol	54.27	23.3
KRG98685	Soybean	cytosol	53.85	23.29
Bra029477.1-P	Field mustard	cytosol	54.27	23.26
Zm00001d053858_P001	Maize	cytosol, extracellular	54.27	23.22
TraesCS6B01G159700.1	Wheat	cytosol	53.42	22.85
TraesCS6D01G121200.1	Wheat	cytosol	52.99	22.67
GSMUA_Achr5P23200_001	Banana	cytosol	52.14	22.55
Os04t0669300-01	Rice	plasma membrane	51.28	22.14
EES11620	Sorghum	cytosol	50.85	21.96
GSMUA_Achr5P23220_001	Banana	cytosol	45.73	21.15
TraesCS2D01G544000.1	Wheat	cytosol	49.15	21.06
TraesCS6A01G131300.2	Wheat	cytosol, plastid	53.42	21.01
TraesCS2B01G572600.1	Wheat	cytosol	48.72	20.88
TraesCS2A01G542800.1	Wheat	cytosol	48.72	20.88
HORVU0Hr1G015420.3	Barley	cytosol, plastid	53.42	20.76
GSMUA_Achr3P01050_001	Banana	cytosol, plastid	54.27	20.29
HORVU2Hr1G122390.1	Barley	cytosol	47.44	20.26
HORVU7Hr1G100500.8	Barley	cytosol, plastid	51.28	18.9
Zm00001d001906_P004	Maize	cytosol	44.87	16.51
PGSC0003DMT400034517	Potato	cytosol	12.39	10.1
KRH51589	Soybean	endoplasmic reticulum	25.21	5.48
KRH60909	Soybean	endoplasmic reticulum	24.79	5.46
KRH14013	Soybean	endoplasmic reticulum	23.5	5.3
KRH74101	Soybean	endoplasmic reticulum	8.12	2.21

Protein Annotations

Gene3D:1.10.238.10	Gene3D:3.40.50.300	MapMan:35.1	UniProt:A0A0R0IZ12	EMBL:ACUP02005258	InterPro:EF-hand-dom_pair
InterPro:EF_hand_dom	InterPro:EH_dom	EnsemblPlantsGene:GLYMA_08G278600	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005515	InterPro:IPR000261	InterPro:IPR002048	EnsemblPlants:KRH45544	ProteinID:KRH45544	ProteinID:KRH45544.1
PFAM:PF12763	PFscan:PS50031	PFscan:PS50222	PANTHER:PTHR11216	PANTHER:PTHR11216:SF76	SMART:SM00027
SMART:SM00054	SUPFAM:SSF47473	UniParc:UPI0006ED9BF4	:	:	:

Description

hypothetical protein

Coordinates

chr8:+:37644036..37652610

Molecular Weight (calculated)

25873.2 Da

IEP (calculated)

8.229

GRAVY (calculated)

-0.226

Length

234 amino acids

Sequence
(BLAST)

001: MRLGKKKIAT KMKIESRSKE ETKTYQEWFN LVDSDGDGRI SGNDTTKFFA LSNLSRSQLK RLWALADVKR QGFLGFTEFV TAMQLVSLAQ VGQELNSDIL
101: KTQIDKENIK PPVLEGLDAL VAQMSLTINA PPEVNGAHVG PEPTTDRFLV VMSGPDQRSI PGNTIVVDAH MPFGGLATFG GSFLSKFQCS QMPHPLYHLM
201: ELKALKLVRP CIWVISSYGT ESSQASPIHT PYSE

Best Arabidopsis Sequence Match ( AT4G05520.2 )
(BLAST)

001: METSSTISIG SCLKEHQKIY KEWFNIADSD GDGRVSGNDA TKFFAMSKLS RQELKQVWAV ADSKRQGFLG LSEFITAMKL VSLAQEGHEI TSDLLKGSID
101: MKSVELPVLE GLENVVSKQK VSKTNVDVED NVTKPQVTAK TPWFKSKSII KPQVNVVTIV DGLKRLYTEK LKPLEVTYRF NDFASPVLTS SDFDAKPMVM
201: LLGQYSTGKT TFIKHLLGCD YPGAHIGPEP TTDRFVVAMS GPDERTIPGN TMAVQADMPF NGLTSFGGAF LSKFECSQMP HPVLDQITLV DTPGVLSGEK
301: QRMQRSYDFT GVISWFASKC DMILLLFDPH KLDISDEFKR VITSLRGNED KIRVVLNKAD QVDTQQLMRV YGALMWSLGK VLNTPEVVRV YIGSFNDKPI
401: NEVAVGPIGK ELFEKEQNDL LADLMDVPKK ACDRKINEFV KRARSAKINA YIMSHLKKEM PAMMGKSKAQ QRLMDNLEEE FGKVQREFHL PAGDFPSVEH
501: FREVLGGYNI DKFEKLKPKM IQAVDDMLGY DIPDLLKKFR NPYDN

Arabidopsis Description

EHD2EH domain-containing protein 2 [Source:UniProtKB/Swiss-Prot;Acc:B3LF48]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.