CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45544	Soybean	cytosol	26.32	14.96
KRH14013	Soybean	endoplasmic reticulum	91.73	11.76
Os06t0728600-00	Rice	plasma membrane	56.39	8.39
KRH60909	Soybean	endoplasmic reticulum	65.41	8.19
CDX96582	Canola	cytosol	67.67	7.87
CDY38814	Canola	cytosol	67.67	7.87
Bra016413.1-P	Field mustard	cytosol	66.92	7.81
KRH51589	Soybean	endoplasmic reticulum	62.41	7.71
CDY00394	Canola	cytosol	64.66	7.52
Bra012288.1-P	Field mustard	cytosol	63.91	7.5
CDY08192	Canola	cytosol	65.41	7.48
KRH36524	Soybean	cytosol	30.08	7.42
KRH11510	Soybean	cytosol	30.08	7.42
GSMUA_Achr4P11750_001	Banana	cytosol	59.4	7.36
CDY04654	Canola	cytosol	64.66	7.31
CDY01320	Canola	cytosol	63.91	7.2
Zm00001d027503_P036	Maize	cytosol	56.39	7.07
EER92924	Sorghum	cytosol	54.89	6.99
KRH73798	Soybean	cytosol	28.57	6.92
Os03t0130500-01	Rice	plasma membrane	54.89	6.84
Zm00001d048338_P035	Maize	cytosol	55.64	6.82
AT1G21630.2	Thale cress	cytosol	63.91	6.82
Bra017933.1-P	Field mustard	cytosol	63.16	6.81
KRH02006	Soybean	cytosol	27.82	6.79
KRH51151	Soybean	cytosol	27.82	6.79
TraesCS4B01G324500.1	Wheat	cytosol	54.89	6.78
TraesCS5A01G497000.1	Wheat	cytosol	54.89	6.73
TraesCS4D01G321600.1	Wheat	cytosol	54.89	6.7
KRG98685	Soybean	cytosol	26.32	6.47
HORVU4Hr1G082280.2	Barley	cytosol	54.89	6.45
EER89004	Sorghum	cytosol	57.89	6.28
Zm00001d014862_P002	Maize	cytosol	57.14	6.28
Zm00001d037125_P009	Maize	cytosol	54.89	6.04
TraesCS7D01G539600.2	Wheat	cytosol	57.14	5.88
TraesCS7A01G553100.1	Wheat	cytosol	57.14	5.87
TraesCS7B01G476800.3	Wheat	cytosol	57.14	5.85
GSMUA_Achr8P13420_001	Banana	cytosol	39.1	5.46
GSMUA_Achr5P19150_001	Banana	endoplasmic reticulum	38.35	5.39
HORVU7Hr1G121230.4	Barley	cytosol	45.86	4.71
KRH74101	Soybean	endoplasmic reticulum	9.02	1.4

Protein Annotations

Gene3D:1.10.238.10	EntrezGene:106797167	MapMan:22.1.4.7	UniProt:A0A0R0LDJ3	EMBL:ACUP02001296	InterPro:EF-hand-dom_pair
InterPro:EF_hand_dom	InterPro:EH_dom	EnsemblPlantsGene:GLYMA_02G311400	GO:GO:0003674	GO:GO:0005488	GO:GO:0005509
GO:GO:0005515	InterPro:IPR000261	InterPro:IPR002048	EnsemblPlants:KRH74100	ProteinID:KRH74100	ProteinID:KRH74100.1
PFscan:PS50031	PFscan:PS50222	PANTHER:PTHR11216	PANTHER:PTHR11216:SF116	SMART:SM00027	SUPFAM:SSF47473
UniParc:UPI0006ED82FC	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:48470309..48470844

Molecular Weight (calculated)

14285.0 Da

IEP (calculated)

9.507

GRAVY (calculated)

-0.047

Length

133 amino acids

Sequence
(BLAST)

001: MASAAPNVDL FDAYFRRADL DRDGRISGAE AVSFFQGSGL PKHVLAQIWA FANQSQSGFL GRAEFYNALK LVTVAQSKRE LTPEMVKAAL YGPASSKIPA
101: PQINFIATVS APQISPASPY PTKILDQGGQ LQI

Best Arabidopsis Sequence Match ( AT1G21630.1 )
(BLAST)

0001: MAAPRPTGGQ DLFDTYFRRA DLDGDGHISG AEAVAFFQGS NLPKHVLAQV WSYADSKKAG YLGRAEFYNA LKLVTVAQSR RELTAEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSF FDDSVPSTPA YPGNLFAEKK SYFDDSVPST PAYSTSDFGG KPFASETPRS DNLFPGRSPF MFDSVPSTPA AHDDFSNNSF
1101: SRFDSFNSNN NDAFSLSRTD SMRSTSEPDP FASRFDSFNY QRYDSFNAQS YDSSSNNNAS ETPKASLTRF DSIGSTRDSD YSHGFGFDDH DPFGSTGPFK
1201: TTTTTAETPR SSDNWNAF

Arabidopsis Description

Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:F4HY32]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.