Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 71.64 | 72.02 |
| VIT_03s0038g03870.t01 | Wine grape | cytosol | 45.69 | 47.8 |
| VIT_18s0122g01080.t01 | Wine grape | cytosol | 48.11 | 45.53 |
| KRH74101 | Soybean | endoplasmic reticulum | 40.44 | 44.87 |
| KRH14013 | Soybean | endoplasmic reticulum | 47.27 | 43.39 |
| EER92924 | Sorghum | cytosol | 47.06 | 42.87 |
| Os03t0130500-01 | Rice | plasma membrane | 47.9 | 42.7 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 47.16 | 41.85 |
| KRH60909 | Soybean | endoplasmic reticulum | 46.53 | 41.71 |
| TraesCS5A01G497000.1 | Wheat | cytosol | 47.16 | 41.42 |
| CDY66337 | Canola | cytosol | 42.65 | 41.01 |
| TraesCS4D01G321600.1 | Wheat | cytosol | 46.85 | 40.95 |
| KRH51589 | Soybean | endoplasmic reticulum | 46.11 | 40.8 |
| TraesCS4B01G324500.1 | Wheat | cytosol | 46.11 | 40.76 |
| CDY29508 | Canola | cytosol | 42.44 | 40.68 |
| Bra025842.1-P | Field mustard | cytosol | 42.86 | 40.68 |
| CDY01356 | Canola | cytosol | 41.6 | 40.41 |
| Bra012247.1-P | Field mustard | cytosol | 42.33 | 40.3 |
| CDY31869 | Canola | cytosol | 41.81 | 40.16 |
| PGSC0003DMT400025666 | Potato | cytosol | 6.83 | 40.12 |
| CDX96625 | Canola | cytosol | 40.97 | 39.8 |
| HORVU4Hr1G082280.2 | Barley | cytosol | 47.27 | 39.79 |
| AT1G20760.1 | Thale cress | cytosol | 42.54 | 39.74 |
| KRH74100 | Soybean | cytosol | 5.46 | 39.1 |
| CDY33644 | Canola | cytosol | 39.81 | 38.13 |
| Zm00001d027503_P036 | Maize | cytosol | 41.39 | 37.13 |
| Zm00001d048338_P035 | Maize | cytosol | 42.12 | 36.96 |
| Solyc02g082530.1.1 | Tomato | nucleus | 3.68 | 36.08 |
| Solyc02g082540.2.1 | Tomato | nucleus | 38.55 | 35.29 |
| CDY08192 | Canola | cytosol | 42.65 | 34.91 |
| CDY04654 | Canola | cytosol | 43.07 | 34.83 |
| Bra012288.1-P | Field mustard | cytosol | 41.07 | 34.51 |
| Solyc04g082560.2.1 | Tomato | cytosol | 44.43 | 34.45 |
| CDY00394 | Canola | cytosol | 41.28 | 34.35 |
| CDY38814 | Canola | cytosol | 41.07 | 34.18 |
| CDX96582 | Canola | cytosol | 40.76 | 33.95 |
| Bra016413.1-P | Field mustard | cytosol | 40.55 | 33.86 |
| CDY01320 | Canola | cytosol | 41.7 | 33.62 |
| Bra016455.1-P | Field mustard | nucleus, plastid | 39.92 | 33.48 |
| AT1G21630.2 | Thale cress | cytosol | 42.96 | 32.8 |
| Bra017933.1-P | Field mustard | cytosol | 40.97 | 31.63 |
| GSMUA_Achr3P20110_001 | Banana | cytosol | 3.05 | 18.47 |
| GSMUA_Achr5P23200_001 | Banana | cytosol | 9.77 | 17.19 |
| GSMUA_Achr3P20100_001 | Banana | cytosol, endoplasmic reticulum | 7.67 | 16.98 |
| GSMUA_Achr4P20130_001 | Banana | cytosol | 9.35 | 16.39 |
| GSMUA_Achr5P23220_001 | Banana | cytosol | 7.98 | 15.02 |
| GSMUA_Achr3P01050_001 | Banana | cytosol, plastid | 9.77 | 14.86 |
| GSMUA_Achr8P13410_001 | Banana | cytosol | 0.42 | 7.02 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:22.1.4.7 | ncoils:Coil | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:EH_dom |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005509 | GO:GO:0005515 | EnsemblPlantsGene:GSMUA_Achr8G13420_001 | EnsemblPlants:GSMUA_Achr8P13420_001 |
| EnsemblPlants:GSMUA_Achr8T13420_001 | InterPro:IPR000261 | InterPro:IPR002048 | UniProt:M0TQ45 | PFAM:PF12763 | PFscan:PS50031 |
| PFscan:PS50222 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | SMART:SM00027 | SUPFAM:SSF47473 | UniParc:UPI00029516F9 |
| SEG:seg | : | : | : | : | : |
Description
EF hand family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G13420_001]
Coordinates
chr8:+:10160073..10176096
Molecular Weight (calculated)
103906.0 Da
IEP (calculated)
4.872
GRAVY (calculated)
-0.709
Length
952 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSSCTCGC ERRTVWMYAD QNRIGFLGRP EFYNALKLVT VAQSGRQLTP EIVKSALYGP ASAKIPAPKI NPVSSPAPQL NSAATPTAPT NSSPPNTPQN
101: VGFRPTQSPQ NAVMNQQFPT ANSNFMRPPQ ATPAAAAAPT QMQGGNLGST TGGSVAGPHL PSSSNLSLST DWLGGKSSGS SVGGTPQTPN RGSIPSQSLD
201: GFGLTLSGTT GPNTPVVSGN DFSSDSFFGA NVSSAASQEK SDSNILDLSL DPFQNAGLLL PAGSQLQQAQ SNVKQNQLDN RKTSSAPTAS NGAAGLASSA
301: PNQPQIQWPK ITQADIKKYT NVFVNVDKDR DGKITGEQAR TLFLSWKLPR EVLKQVWDLS DQDNDSMLSL REFCIALYLM ERSREGFPLP SVLPSNIMYD
401: ETLLRSTGMP SAAYGVPTWQ PGLPQQSLRG SHPVMPTTGI RAPIQNSDPS QAFSAAQPMQ QTLGKPGLDN HMLKNLGNDR QTTVNLKNQE ATNVDNKVQE
501: VEKQIMDSRE KIEFYRTKMQ ELVLYKSRCD NRLNEITERA SADRREVELL AKKYEEKYKQ VGELASKLAV EEAKHRDIQE RKMELHNAIV KMEQGGSADG
601: LLQVRVDRIQ SDLEGLEKAL NERCKQYDVH VKATTSIELP FGWESGPTEG VADWDEDWDK FEDEGFTVVK DLMSVVDTAS GEYPKSPSIW SDKASMDETS
701: PVASSRNVDG KNEKLYDTHE RMNGSTYDNS EEGLTRSPGS PGSTLESPFN STQFGIHDNS SRTKESHSDQ VDAESTVSGD KYMDEPWTFD DTDSVWKETE
801: YGGGAQNTFF MSDFGSIKSN SPSASSVFEK EKSSFFDDSV PSSPMFNSAS SSKFNSGQED YSFNSFGRFD SFATHESGSF TARESLSRFD SNVSMSRPET
901: LARFDSISSK REVGNRRGFE SFDDADPFGS TGPFKSSGGH SPRQDSDNWR AF
101: VGFRPTQSPQ NAVMNQQFPT ANSNFMRPPQ ATPAAAAAPT QMQGGNLGST TGGSVAGPHL PSSSNLSLST DWLGGKSSGS SVGGTPQTPN RGSIPSQSLD
201: GFGLTLSGTT GPNTPVVSGN DFSSDSFFGA NVSSAASQEK SDSNILDLSL DPFQNAGLLL PAGSQLQQAQ SNVKQNQLDN RKTSSAPTAS NGAAGLASSA
301: PNQPQIQWPK ITQADIKKYT NVFVNVDKDR DGKITGEQAR TLFLSWKLPR EVLKQVWDLS DQDNDSMLSL REFCIALYLM ERSREGFPLP SVLPSNIMYD
401: ETLLRSTGMP SAAYGVPTWQ PGLPQQSLRG SHPVMPTTGI RAPIQNSDPS QAFSAAQPMQ QTLGKPGLDN HMLKNLGNDR QTTVNLKNQE ATNVDNKVQE
501: VEKQIMDSRE KIEFYRTKMQ ELVLYKSRCD NRLNEITERA SADRREVELL AKKYEEKYKQ VGELASKLAV EEAKHRDIQE RKMELHNAIV KMEQGGSADG
601: LLQVRVDRIQ SDLEGLEKAL NERCKQYDVH VKATTSIELP FGWESGPTEG VADWDEDWDK FEDEGFTVVK DLMSVVDTAS GEYPKSPSIW SDKASMDETS
701: PVASSRNVDG KNEKLYDTHE RMNGSTYDNS EEGLTRSPGS PGSTLESPFN STQFGIHDNS SRTKESHSDQ VDAESTVSGD KYMDEPWTFD DTDSVWKETE
801: YGGGAQNTFF MSDFGSIKSN SPSASSVFEK EKSSFFDDSV PSSPMFNSAS SSKFNSGQED YSFNSFGRFD SFATHESGSF TARESLSRFD SNVSMSRPET
901: LARFDSISSK REVGNRRGFE SFDDADPFGS TGPFKSSGGH SPRQDSDNWR AF
0001: MAGQNPNMDQ FEAYFKRADL DGDGRISGAE AVGFFQGSGL SKQVLAQIWS LSDRSHSGFL DRQNFYNSLR LVTVAQSKRD LTPEIVNAAL NTPAAAKIPP
0101: PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP
0201: GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF
0301: SMLPSGNQLQ QPRPAASSQP AVSSQGPSSG LPPGSAVGSG HSTPAGNNQP PWPKMKPSDV QKYTKVFMEV DSDKDGKITG EQARNLFLSW RLPREVLKHV
0401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTALPSS IMFDETLLSI SGAPSHGYAN AGWGSGQGFV QQPGMGARPI TPTTGMRPPV PAPGPQPGSG
0501: IPPNQPRNQA PVLDAPFANH LGNGYSASSN LPEAAADEEK VDEKQNAYMD SREKLDYYRT KMQDIVLYKS RCDNRLNEIS ERASADKREA ETLAKKYEEK
0601: YKQVAEIGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVNSKALV DLPAGWQPGI QEGAALWDEE
0701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVDDGSGPPD SPTHVEDNYG PFSETSDRHH ESEYGTTHSE DRSPRDSPVS RNATEVPSPD YSQGKNSEFF
0801: DDSNWASAFD TNDDVDSVWG FDASKSQDGD YFGSGDDFGG NTARADSPSS RSFGAQRKSQ FAFDDSVPST PLSRFGNSPP RFSDASARDN NFDSFSRFDS
0901: FNTSEAGAGF SSQPERLSRF DSINSSKDFG GAAFSRFDSI NSSRDVTGAE KFSRFDSINS SKDFGGPSLS RFDSMNSTKD FSGSHGYSFD DADPFGSTGP
1001: FKVSSDESPT KRSDNWNSF
0101: PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP
0201: GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF
0301: SMLPSGNQLQ QPRPAASSQP AVSSQGPSSG LPPGSAVGSG HSTPAGNNQP PWPKMKPSDV QKYTKVFMEV DSDKDGKITG EQARNLFLSW RLPREVLKHV
0401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTALPSS IMFDETLLSI SGAPSHGYAN AGWGSGQGFV QQPGMGARPI TPTTGMRPPV PAPGPQPGSG
0501: IPPNQPRNQA PVLDAPFANH LGNGYSASSN LPEAAADEEK VDEKQNAYMD SREKLDYYRT KMQDIVLYKS RCDNRLNEIS ERASADKREA ETLAKKYEEK
0601: YKQVAEIGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVNSKALV DLPAGWQPGI QEGAALWDEE
0701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVDDGSGPPD SPTHVEDNYG PFSETSDRHH ESEYGTTHSE DRSPRDSPVS RNATEVPSPD YSQGKNSEFF
0801: DDSNWASAFD TNDDVDSVWG FDASKSQDGD YFGSGDDFGG NTARADSPSS RSFGAQRKSQ FAFDDSVPST PLSRFGNSPP RFSDASARDN NFDSFSRFDS
0901: FNTSEAGAGF SSQPERLSRF DSINSSKDFG GAAFSRFDSI NSSRDVTGAE KFSRFDSINS SKDFGGPSLS RFDSMNSTKD FSGSHGYSFD DADPFGSTGP
1001: FKVSSDESPT KRSDNWNSF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:Q9LM78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.