Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P20110_001 | Banana | cytosol | 29.82 | 10.83 |
| Os06t0687900-01 | Rice | cytosol | 17.54 | 8.33 |
| GSMUA_Achr4P11750_001 | Banana | cytosol | 66.67 | 3.54 |
| GSMUA_Achr5P23220_001 | Banana | cytosol | 29.82 | 3.36 |
| GSMUA_Achr4P20130_001 | Banana | cytosol | 29.82 | 3.13 |
| GSMUA_Achr5P23200_001 | Banana | cytosol | 28.07 | 2.96 |
| GSMUA_Achr3P01050_001 | Banana | cytosol, plastid | 28.07 | 2.56 |
| GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 14.04 | 0.84 |
| GSMUA_Achr3P20100_001 | Banana | cytosol, endoplasmic reticulum | 3.51 | 0.47 |
| GSMUA_Achr8P13420_001 | Banana | cytosol | 7.02 | 0.42 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P13410_001 | EnsemblPlants:GSMUA_Achr8T13410_001 | EnsemblPlantsGene:GSMUA_Achr8G13410_001 | Gene3D:1.10.238.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | InterPro:EF-hand-dom_pair | InterPro:EF_hand_dom | InterPro:IPR002048 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 |
| PFscan:PS50222 | SUPFAM:SSF47473 | UniParc:UPI0002957014 | UniProt:M0TQ44 | MapMan:35.2 | : |
Description
EF hand family protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr8G13410_001]
Coordinates
chr8:+:10143746..10148001
Molecular Weight (calculated)
6369.5 Da
IEP (calculated)
6.737
GRAVY (calculated)
-0.419
Length
57 amino acids
Sequence
(BLAST)
(BLAST)
1: MDVFDEYFKR ADLDRDGKIS GPEAVAFFQG SNLPKNVLAQ LSLFENPKKK TSSYIAA
0001: MAAPRPTGGQ DLFDTYFRRA DLDGDGHISG AEAVAFFQGS NLPKHVLAQV WSYADSKKAG YLGRAEFYNA LKLVTVAQSR RELTAEIVKA AIYSPASANI
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSY FDDSVPSTPA YSTSDFGGKP FASETPRSDN LFPGRSPFMF DSVPSTPAAH DDFSNNSFSR FDSFNSNNND AFSLSRTDSM
1101: RSTSEPDPFA SRFDSFNYQR YDSFNAQSYD SSSNNNASET PKASLTRFDS IGSTRDSDYS HGFGFDDHDP FGSTGPFKTT TTTAETPRSS DNWNAF
0101: PAPKINLAAT PSPQPRGVLP ATQAQGVTSM PSVAAGVRGP HMGGTVSTSN QQVVPGQQNQ FTGIPPSQTQ QNFQSPGMPA GGTNAPRPAN QPMPSDWLSG
0201: RSVGPSGNVN SQIPSSQSTY GLTAPNSTAN HITKPHITPA VTSSTTTRPQ ESAPVHNPQE SSATFGSRVS NVPSNQLVPK DPKELAASGN GFTSDSLFGD
0301: VFSVTSTQPK QHPTGSASTT GISSVTTGTV AGPEITQSVV RQSSIPQQGS LSQHAVGVQT QLTGNSGQPY TSSGAASGPP GSTVGVGISA TSQLAQRPPH
0401: PHSQPQPRPQ GQSQPPWPKM TPADVQKYTK VFVQVDTDRD GKITGNQARN LFLSWRLPRD ALKQVWDLSD QDNDSMLSLR EFCIAVYLME RYREGRPLPP
0501: VFPSSIIHSE SMFTSPGQSV APHGNASWGH PQGFQQQPHP GGLRPPAGPK GKPPRPVPLS PSDGMVQPTQ PKRKMPVLEK PLVDQLSKEE QDSLNTKFEE
0601: ATAVDKKVDE LEKEIADSKQ KIDFFRAKMQ ELVLYKSRCD NRYNEIAERV LGDKRELESL AKKYEEKYKK SGNVGSKLTI EEATFRDIQE KKMELYQAIV
0701: KFEEGKLDDS IVKERTEHIQ SGLEELIKNL NERCKQYGVR GKPTSLVELP FGWQPGIQEG AADWDEDWDK LEDEGFTFVK ELTLDIQNVI APPKEKSSAW
0801: RKEVDVSSKE GEDVSFSDAD SKTGKKQSSG EEDSEQSEGK TSDVDARDKN GSLDDSKVRK GIEADSSPRT KDTRSENGHD DGESTASAGK TVNYDSHDET
0901: DSVSSVNPDN GKDKDHGKYD SGFGFGFGFD DFSIKPIKTG STISNDFLPP KLSIFADSVP SPPANASDVS PTKPSLFADS VPSTPATNNA SYPGQKSFFD
1001: DSVPSTPAYP GNLFAEKKSY FDDSVPSTPA YSTSDFGGKP FASETPRSDN LFPGRSPFMF DSVPSTPAAH DDFSNNSFSR FDSFNSNNND AFSLSRTDSM
1101: RSTSEPDPFA SRFDSFNYQR YDSFNAQSYD SSSNNNASET PKASLTRFDS IGSTRDSDYS HGFGFDDHDP FGSTGPFKTT TTTAETPRSS DNWNAF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:F4HY32]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.