Factsheet for GSMUA_Achr5P23220_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P23200_001	Banana	cytosol	72.92	68.21
GSMUA_Achr3P20100_001	Banana	cytosol, endoplasmic reticulum	57.71	67.91
PGSC0003DMT400034517	Potato	cytosol	37.75	66.55
Os06t0687800-01	Rice	plasma membrane	70.55	65.62
TraesCS7B01G340200.2	Wheat	cytosol	70.36	65.32
TraesCS7D01G430800.1	Wheat	cytosol	70.16	65.14
TraesCS7A01G441500.1	Wheat	cytosol	70.16	65.14
EER88852	Sorghum	cytosol	69.57	64.71
OQU84412	Sorghum	cytosol	69.17	63.99
Os02t0158100-01	Rice	cytosol	68.58	63.9
Zm00001d014526_P002	Maize	cytosol	68.77	63.62
Zm00001d053858_P001	Maize	cytosol, extracellular	68.58	63.44
TraesCS6B01G159700.1	Wheat	cytosol	68.58	63.44
TraesCS6D01G121200.1	Wheat	cytosol	68.58	63.44
GSMUA_Achr4P20130_001	Banana	cytosol	67.0	62.43
VIT_00s0516g00020.t01	Wine grape	cytosol	67.79	62.36
KRH02006	Soybean	cytosol	66.4	61.65
KRH51151	Soybean	cytosol	66.01	61.28
KRH36524	Soybean	cytosol	64.82	60.85
Bra029477.1-P	Field mustard	cytosol	65.42	60.62
CDY16689	Canola	cytosol	65.42	60.62
KRH11510	Soybean	cytosol	64.43	60.48
Solyc11g012020.1.1	Tomato	cytosol	65.22	60.33
CDX94536	Canola	cytosol	65.22	60.33
AT4G05520.1	Thale cress	cytosol	65.02	60.26
GSMUA_Achr3P20110_001	Banana	cytosol	18.58	59.87
TraesCS6A01G131300.2	Wheat	cytosol, plastid	68.18	57.98
HORVU0Hr1G015420.3	Barley	cytosol, plastid	68.38	57.48
GSMUA_Achr3P01050_001	Banana	cytosol, plastid	67.59	54.63
HORVU7Hr1G100500.8	Barley	cytosol, plastid	66.8	53.23
HORVU7Hr1G060580.1	Barley	cytosol, plastid	43.08	50.11
KRH45544	Soybean	cytosol	21.15	45.73
GSMUA_Achr8P13410_001	Banana	cytosol	3.36	29.82
GSMUA_Achr8P13420_001	Banana	cytosol	15.02	7.98
GSMUA_Achr4P11750_001	Banana	cytosol	16.6	7.83
GSMUA_Achr5P19150_001	Banana	endoplasmic reticulum	14.62	7.81

Protein Annotations

Gene3D:1.10.238.10	Gene3D:1.10.268.20	Gene3D:3.40.50.300	MapMan:35.1	ncoils:Coil	InterPro:Dynamin_SF
InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	InterPro:EHD_N	InterPro:EH_dom	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005509	GO:GO:0005515	GO:GO:0005525	EnsemblPlantsGene:GSMUA_Achr5G23220_001	EnsemblPlants:GSMUA_Achr5P23220_001
EnsemblPlants:GSMUA_Achr5T23220_001	InterPro:G_DYNAMIN_dom	InterPro:IPR000261	InterPro:IPR002048	InterPro:IPR030381	UniProt:M0T0Z7
InterPro:P-loop_NTPase	PFAM:PF00350	PFAM:PF12763	PFAM:PF16880	PFscan:PS50031	PFscan:PS50222
PFscan:PS51718	PANTHER:PTHR11216	PANTHER:PTHR11216:SF76	SMART:SM00027	SMART:SM00054	SUPFAM:SSF47473
SUPFAM:SSF52540	UniParc:UPI0002961BD9	SEG:seg	:	:	:

Description

Putative EH domain-containing protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G23220_001]

Coordinates

chr5:+:25015060..25019132

Molecular Weight (calculated)

57565.6 Da

IEP (calculated)

8.374

GRAVY (calculated)

-0.245

Length

506 amino acids

Sequence
(BLAST)

001: MDTASLISEE HDRIYGKWFS FVDSDRDGRI TETDAICFFA MSNLPRRVLK QIWATADSKR KGYLGFKEFA TAMKLVALAQ AGNEITQDSL AHADLQKLNP
101: PMMGGLDTLL NINKHSTKVI DGLKRLYSQK LELLEITYQF NEFASPLLTN SDFDAKPMVM LLGQYSTGKT TFIKHLLKCD YPGACIGLEP TTDKFIVVTS
201: GPNERTIFGN TIALQTDMPF TGLTKFGTEF LSKFECSQMP HSLLERITFV DTPGVLSGEK QRIQRSYDFT GVTSWFAAKC DLIILLFDPH KIDISDEFNN
301: VIRSLHGHED KIRVVLNKAD QVDTEQLIRV NRALIWSLAK VLPNRPEVMR IYNGSFNDKP SNNVVVDPIL KKVFERDQND LLSDVRDIPN NVCDLKIRAF
401: VRRAKAAKVH AYIISHLKNK MPLILGKATA QRRLIDNLEN EFVEVQRKYN LPLGDFPDVQ RFKEALSCHN IDEFKKLKPK LIRAVDVMLT CDIPQLLRTF
501: GNSYES

Best Arabidopsis Sequence Match ( AT3G20290.3 )
(BLAST)

001: MEIESVAAGS CSKENQMIYK EWFEFSDSDG DGRITGNDAI KFFTMSNLPR PELKQIWAIA DSKRQGYLGF KEFIVAMQLV SLAQTGHEIS HEVLISDVDF
101: KNINPPTMEG LGVLMAKKKH SSKSSDPNMN GSPAADTSLT AHWFSSKSSK KISLSSVTSI VDGLKRLYIQ KLKPLEVAYR FNDFVSPLLT NSDFDAKPMV
201: MLLGQYSTGK TTFIKHLLKS TYPGAHIGPE PTTDRFVVVM SGPDERSIPG NTVAVQADMP FSGLTTFGTA FLSKFECSQM PHPLLEHVTF VDTPGVLSGE
301: KQRTQRAYDF TGVTSWFASK CDLILLLFDP HKLDVSDEFK RVISSLRGHD DKIRVVLNKA DQVDTQQLMR VYGALMWSLG KVLNTPEVSR VYIGSFSDKP
401: INEAATGPIG RELFEKEQDD LLADLKDIPK KACDRRINEF VKRARAAKIH AYIISHLKKE MPAIMGKAKA QQKLIDNLED EFGKVQREHH LPKGDFPNVD
501: HFREVLSGYN IDKFEKLKPK MLQTVDDMLG YDIPELLKNF KNPYD

Arabidopsis Description

EHD1EHD1 [Source:UniProtKB/TrEMBL;Acc:A0A178VAZ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.