Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d027503_P036 | Maize | cytosol | 87.0 | 88.97 |
| EER92924 | Sorghum | cytosol | 80.55 | 83.64 |
| Os03t0130500-01 | Rice | plasma membrane | 69.31 | 70.41 |
| TraesCS4D01G321600.1 | Wheat | cytosol | 69.12 | 68.87 |
| TraesCS5A01G497000.1 | Wheat | cytosol | 68.66 | 68.73 |
| TraesCS4B01G324500.1 | Wheat | cytosol | 67.93 | 68.43 |
| HORVU4Hr1G082280.2 | Barley | cytosol | 68.39 | 65.61 |
| KRH74100 | Soybean | cytosol | 6.82 | 55.64 |
| GSMUA_Achr5P19150_001 | Banana | endoplasmic reticulum | 38.43 | 44.03 |
| VIT_03s0038g03870.t01 | Wine grape | cytosol | 36.59 | 43.63 |
| GSMUA_Achr8P13420_001 | Banana | cytosol | 36.96 | 42.12 |
| VIT_18s0122g01080.t01 | Wine grape | cytosol | 38.8 | 41.85 |
| CDY01356 | Canola | cytosol | 35.85 | 39.69 |
| KRH60909 | Soybean | endoplasmic reticulum | 38.25 | 39.08 |
| Bra012247.1-P | Field mustard | cytosol | 35.94 | 39.0 |
| CDY31869 | Canola | cytosol | 35.58 | 38.95 |
| CDX96625 | Canola | cytosol | 35.02 | 38.78 |
| CDY29508 | Canola | cytosol | 35.48 | 38.77 |
| CDY66337 | Canola | cytosol | 35.3 | 38.69 |
| KRH14013 | Soybean | endoplasmic reticulum | 36.77 | 38.48 |
| Bra025842.1-P | Field mustard | cytosol | 35.48 | 38.38 |
| KRH51589 | Soybean | endoplasmic reticulum | 38.06 | 38.38 |
| AT1G20760.1 | Thale cress | cytosol | 35.76 | 38.08 |
| CDY33644 | Canola | cytosol | 34.75 | 37.93 |
| KRH74101 | Soybean | endoplasmic reticulum | 28.66 | 36.25 |
| Solyc02g082540.2.1 | Tomato | nucleus | 34.01 | 35.48 |
| Bra016455.1-P | Field mustard | nucleus, plastid | 34.56 | 33.04 |
| Solyc04g082560.2.1 | Tomato | cytosol | 35.85 | 31.68 |
| CDY08192 | Canola | cytosol | 32.81 | 30.61 |
| Bra012288.1-P | Field mustard | cytosol | 31.71 | 30.36 |
| CDY00394 | Canola | cytosol | 31.98 | 30.33 |
| CDY38814 | Canola | cytosol | 31.61 | 29.98 |
| CDY04654 | Canola | cytosol | 32.44 | 29.91 |
| CDY01320 | Canola | cytosol | 32.07 | 29.47 |
| CDX96582 | Canola | cytosol | 30.97 | 29.4 |
| Bra016413.1-P | Field mustard | cytosol | 30.69 | 29.21 |
| Zm00001d037125_P009 | Maize | cytosol | 32.44 | 29.14 |
| Bra017933.1-P | Field mustard | cytosol | 33.09 | 29.12 |
| Zm00001d014862_P002 | Maize | cytosol | 32.44 | 29.07 |
| AT1G21630.2 | Thale cress | cytosol | 33.27 | 28.95 |
| Zm00001d014526_P002 | Maize | cytosol | 9.22 | 18.28 |
| Zm00001d053858_P001 | Maize | cytosol, extracellular | 9.12 | 18.1 |
| PGSC0003DMT400025666 | Potato | cytosol | 2.12 | 14.2 |
| Zm00001d001906_P004 | Maize | cytosol | 7.93 | 13.52 |
| Solyc02g082530.1.1 | Tomato | nucleus | 0.28 | 3.09 |
Protein Annotations
| Gene3D:1.10.238.10 | EntrezGene:103639543 | MapMan:22.1.4.7 | UniProt:A0A1D6PJG6 | ProteinID:AQL09430.1 | ncoils:Coil |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:EH_dom | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005509 | GO:GO:0005515 | InterPro:IPR000261 | InterPro:IPR002048 | PFAM:PF12763 | PFAM:PF13202 |
| ScanProsite:PS00018 | PFscan:PS50031 | PFscan:PS50222 | PANTHER:PTHR11216 | PANTHER:PTHR11216:SF116 | SMART:SM00027 |
| SMART:SM00054 | SUPFAM:SSF47473 | UniParc:UPI000843A281 | EnsemblPlantsGene:Zm00001d048338 | EnsemblPlants:Zm00001d048338_P035 | EnsemblPlants:Zm00001d048338_T035 |
| SEG:seg | : | : | : | : | : |
Description
Calcium-binding EF hand family protein
Coordinates
chr9:-:154675725..154689945
Molecular Weight (calculated)
115524.0 Da
IEP (calculated)
6.430
GRAVY (calculated)
-0.438
Length
1085 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAGTEAFEAY FRRADLDQDG RISGQEAVAF FQGANLPQQV LAQVWMHADR NKTGFLGRPE FFNALRLVTV AQSGRQLTPD IVQSALYGPA AARIPAPKIA
0101: AGAVPPQMGA AGAPRPQGSA AMTPTPGQVG AAQMNPAATP RPQGSGMVPT STQVSVPQVN PGAAPRPQGI NSTMPAASQG GALQATQFAG PRVMQPQPSN
0201: LGITQQQPSS TGFMHPPQVG APAASLQAQA PGINQGLVSG GSMGGSVGWQ GWQGGNAASV GGIPQAIPGA APSQAAQGGF GPGLPRTIGV ALVQQVQAMS
0301: PSPLPPQSNS AGLPQDSKAL VMSGNGPAIS SGSSTDIFSA LTQQKPSISA PAPQTSSIPS SSSFMPTPTG SQNLTNLTQF GSLQGSSQRQ QTQPVVKPSP
0401: APAAPVVSAG ISNPSPQWPK ITQSDIQKYM KVFGDVDRDR DGKITGAEAR TLFLSWRLPR EVLKQVWDLS DQDNDGMLSL REFCVALYLM ERHRAGTPLP
0501: PALPDSLRHD ETLLRATGLP STAYNGPSWQ QNQGGLSQRG PGAPGVPAGG VRPPLPPHLH SQTDGASRPG QPRSYMSGMD NHVVVQGNKD DKSGVNQSVQ
0601: EVADPKKVEV EKQVLDSREK LEYYRTKMQD LVLYKSRCDN RLNEITERAS SDKREVESLA KKYEEKYKQV AELASKLAVE EAAYRDVQER KVELNDALIK
0701: MVQGGSVDGL LQVRADRIQY QLEEMEKALS ERCKHFGLQF KSSASVELPS GWEPGPQEGL IEWDEDWDKF EDEGFSIVKD NGTIQENPIS AENGKVPSLW
0801: DDGDDMSPVA SSNGHIKEER RYSVGDQVAE SEIAYDFGDE SVRSPGSAGR SASGSPFKSS RFGMHDSSPS KRESYSDHGG SESVFGDKFG DETSWNFDDQ
0901: DTDSVWGSTA LNAVRRRTNT VAVAHITLSL GPRQALQVAL VYLERRGVRS LMILSQVPLH THLGSLQNSV KAVMIAPLIA LGSLIPSDPK TLGSSPRKVV
1001: SPGLTPLAAP KARMYQDSIQ GIAQEILVGL TLSMTPIRSV RADLLKHLEA GLHPSSDTFS ALSRDFCVLR PADLSIQGSD SLSEL
0101: AGAVPPQMGA AGAPRPQGSA AMTPTPGQVG AAQMNPAATP RPQGSGMVPT STQVSVPQVN PGAAPRPQGI NSTMPAASQG GALQATQFAG PRVMQPQPSN
0201: LGITQQQPSS TGFMHPPQVG APAASLQAQA PGINQGLVSG GSMGGSVGWQ GWQGGNAASV GGIPQAIPGA APSQAAQGGF GPGLPRTIGV ALVQQVQAMS
0301: PSPLPPQSNS AGLPQDSKAL VMSGNGPAIS SGSSTDIFSA LTQQKPSISA PAPQTSSIPS SSSFMPTPTG SQNLTNLTQF GSLQGSSQRQ QTQPVVKPSP
0401: APAAPVVSAG ISNPSPQWPK ITQSDIQKYM KVFGDVDRDR DGKITGAEAR TLFLSWRLPR EVLKQVWDLS DQDNDGMLSL REFCVALYLM ERHRAGTPLP
0501: PALPDSLRHD ETLLRATGLP STAYNGPSWQ QNQGGLSQRG PGAPGVPAGG VRPPLPPHLH SQTDGASRPG QPRSYMSGMD NHVVVQGNKD DKSGVNQSVQ
0601: EVADPKKVEV EKQVLDSREK LEYYRTKMQD LVLYKSRCDN RLNEITERAS SDKREVESLA KKYEEKYKQV AELASKLAVE EAAYRDVQER KVELNDALIK
0701: MVQGGSVDGL LQVRADRIQY QLEEMEKALS ERCKHFGLQF KSSASVELPS GWEPGPQEGL IEWDEDWDKF EDEGFSIVKD NGTIQENPIS AENGKVPSLW
0801: DDGDDMSPVA SSNGHIKEER RYSVGDQVAE SEIAYDFGDE SVRSPGSAGR SASGSPFKSS RFGMHDSSPS KRESYSDHGG SESVFGDKFG DETSWNFDDQ
0901: DTDSVWGSTA LNAVRRRTNT VAVAHITLSL GPRQALQVAL VYLERRGVRS LMILSQVPLH THLGSLQNSV KAVMIAPLIA LGSLIPSDPK TLGSSPRKVV
1001: SPGLTPLAAP KARMYQDSIQ GIAQEILVGL TLSMTPIRSV RADLLKHLEA GLHPSSDTFS ALSRDFCVLR PADLSIQGSD SLSEL
0001: MAGQNPNMDQ FEAYFKRADL DGDGRISGAE AVGFFQGSGL SKQVLAQIWS LSDRSHSGFL DRQNFYNSLR LVTVAQSKRD LTPEIVNAAL NTPAAAKIPP
0101: PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP
0201: GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF
0301: SMLPSGNQLQ QPRPAASSQP AVSSQGPSSG LPPGSAVGSG HSTPAGNNQP PWPKMKPSDV QKYTKVFMEV DSDKDGKITG EQARNLFLSW RLPREVLKHV
0401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTALPSS IMFDETLLSI SGAPSHGYAN AGWGSGQGFV QQPGMGARPI TPTTGMRPPV PAPGPQPGSG
0501: IPPNQPRNQA PVLDAPFANH LGNGYSASSN LPEAAADEEK VDEKQNAYMD SREKLDYYRT KMQDIVLYKS RCDNRLNEIS ERASADKREA ETLAKKYEEK
0601: YKQVAEIGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVNSKALV DLPAGWQPGI QEGAALWDEE
0701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVDDGSGPPD SPTHVEDNYG PFSETSDRHH ESEYGTTHSE DRSPRDSPVS RNATEVPSPD YSQGKNSEFF
0801: DDSNWASAFD TNDDVDSVWG FDASKSQDGD YFGSGDDFGG NTARADSPSS RSFGAQRKSQ FAFDDSVPST PLSRFGNSPP RFSDASARDN NFDSFSRFDS
0901: FNTSEAGAGF SSQPERLSRF DSINSSKDFG GAAFSRFDSI NSSRDVTGAE KFSRFDSINS SKDFGGPSLS RFDSMNSTKD FSGSHGYSFD DADPFGSTGP
1001: FKVSSDESPT KRSDNWNSF
0101: PKINLSAIPA PRPNPAATTV GPVSGFGGPG APNAIVNQNY FPPQQNQQMR PNQGISGLTS LRPAAGPEYR PSALSGQFQP VPVGSVTHPP QPVPTSVSGP
0201: GSSTFNLNSL YAGAGNTSGY SSGFGGGSLA APSPGLKQES HIDPKALVVS GNGGDMFSSF QQKQEPTLSN SSISSAIVPT SAGIQPPTKP NALDSLQSTF
0301: SMLPSGNQLQ QPRPAASSQP AVSSQGPSSG LPPGSAVGSG HSTPAGNNQP PWPKMKPSDV QKYTKVFMEV DSDKDGKITG EQARNLFLSW RLPREVLKHV
0401: WELSDQDNDT MLSLREFCIS LYLMERYREG RPLPTALPSS IMFDETLLSI SGAPSHGYAN AGWGSGQGFV QQPGMGARPI TPTTGMRPPV PAPGPQPGSG
0501: IPPNQPRNQA PVLDAPFANH LGNGYSASSN LPEAAADEEK VDEKQNAYMD SREKLDYYRT KMQDIVLYKS RCDNRLNEIS ERASADKREA ETLAKKYEEK
0601: YKQVAEIGSK LTIEEARFRE IEGRKMELSQ AIVNMEQGGS ADGLLQVRAD RIQSDLEELM KALTERCKKH GLEVNSKALV DLPAGWQPGI QEGAALWDEE
0701: WDKFEDEGFG NEITFDKSKE QNSSGEKENG TVDDGSGPPD SPTHVEDNYG PFSETSDRHH ESEYGTTHSE DRSPRDSPVS RNATEVPSPD YSQGKNSEFF
0801: DDSNWASAFD TNDDVDSVWG FDASKSQDGD YFGSGDDFGG NTARADSPSS RSFGAQRKSQ FAFDDSVPST PLSRFGNSPP RFSDASARDN NFDSFSRFDS
0901: FNTSEAGAGF SSQPERLSRF DSINSSKDFG GAAFSRFDSI NSSRDVTGAE KFSRFDSINS SKDFGGPSLS RFDSMNSTKD FSGSHGYSFD DADPFGSTGP
1001: FKVSSDESPT KRSDNWNSF
Arabidopsis Description
Calcium-binding EF hand family protein [Source:UniProtKB/TrEMBL;Acc:Q9LM78]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.