Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
27297264
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG33009 | Sorghum | mitochondrion | 87.73 | 95.29 |
| Zm00001d044026_P011 | Maize | mitochondrion | 85.72 | 88.32 |
| Os01t0653800-02 | Rice | plasma membrane | 80.99 | 88.16 |
| TraesCS3B01G263200.1 | Wheat | golgi, unclear | 78.85 | 86.91 |
| TraesCS3A01G236500.2 | Wheat | mitochondrion | 78.52 | 86.8 |
| TraesCS3D01G237000.1 | Wheat | mitochondrion | 78.25 | 84.09 |
| HORVU3Hr1G058910.1 | Barley | plastid | 80.52 | 82.61 |
| GSMUA_Achr1P28020_001 | Banana | mitochondrion | 65.58 | 78.51 |
| KRG96637 | Soybean | endoplasmic reticulum | 58.44 | 77.52 |
| GSMUA_Achr6P21400_001 | Banana | mitochondrion | 67.78 | 76.85 |
| CDY19826 | Canola | mitochondrion | 60.97 | 73.77 |
| KRG89827 | Soybean | cytosol | 16.61 | 72.38 |
| KRG99486 | Soybean | endoplasmic reticulum | 15.01 | 72.35 |
| KRH68370 | Soybean | endoplasmic reticulum | 63.78 | 70.71 |
| AT5G24710.1 | Thale cress | mitochondrion | 63.38 | 68.99 |
| CDX87116 | Canola | mitochondrion | 62.58 | 68.22 |
| PGSC0003DMT400046936 | Potato | mitochondrion | 63.71 | 67.68 |
| VIT_05s0094g01650.t01 | Wine grape | cytosol | 3.2 | 66.67 |
| Solyc01g102510.2.1 | Tomato | nucleus | 63.71 | 66.6 |
| Bra028077.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, plastid | 5.34 | 46.78 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:22.1.4.4 | UniProt:A0A1D6G0I8 | ProteinID:AQK97027.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR45521 | SMART:SM00320 |
| SUPFAM:SSF50978 | TMHMM:TMhelix | UniParc:UPI0008435B6A | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | EnsemblPlantsGene:Zm00001d011483 | EnsemblPlants:Zm00001d011483_P004 | EnsemblPlants:Zm00001d011483_T004 | SEG:seg |
Description
Transducin/WD40 repeat-like superfamily protein
Coordinates
chr8:+:151866938..151893349
Molecular Weight (calculated)
159710.0 Da
IEP (calculated)
7.046
GRAVY (calculated)
-0.068
Length
1499 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEMGSELSKT EFGDQGEDSN ILSSRLKEIS TPDRPATLRF LAGLSRPIRP AHFSLLFASF LTVAVAVAAL LVQISPTLPR RHQTSTTSLL PPLCSSPDLQ
0101: TPDLCSCPRL PLASDNPAAA RGGRGEMLRL RAFRPTSDKV VKIQLHPTHP WLVTADANDR VSVWNWEHRQ VIYELKAGGV DERRLVGAKL EKLAEGDDSK
0201: GKPTEAIRGG SVKQVSFYDD DVRFWQHWRN CSAAAEAPTA VNQQSSMFSA PAPSTRGRHF VVICCENKVI FLDLVTMRGR DVPKQELDNR SLLCMEFLSR
0301: SSSSDAPLVA FGSSDGVIRV LSMLTWKLVR RYTGGHKGAI ACLMTYMSAA GEVHLVSGGN DGLLILWSAD HIHDSRELVP KISMKAHDGG VVAVELSRVM
0401: GSAPQLITIG ADKTLAIWDT VTFKEIRRIK PVPKLACHSV ASWCHPRAPN LDILTCVKDS HIWAIEHPTY SALTRPLCEL SSLVPPQVLA QHKKLRVYCM
0501: VAHPLQPHLV ATGTNIGVIL SEFDPRALPA IAPLPTPTGS KEHSAVYIVE RELKLLNFQL SNTANPSLGN AGVASDAGRS RNDSLEQLIV NQSKKHISTP
0601: APHDSYSVLS VSSSGKYVAI VWPDIPSFAV CKASDWSVVD SGTGKLFAWD TCRDRYALVE SALAPRMPLV VKGGSSKKAK EAAAAAAQAA AAAASAASAA
0701: TVQVRILLDD GTAHVLQRSI DGRSEPVTKT LLSSVMAVIF QVIGLHGGAL LGVTYRTSRR ISPLTATAIS TVQSMPLSGF GGSGSSFASD DPWETYQPVS
0801: GLLAQPEWTA WDQTVEYCAF AYQQYIVISS LRPQFRYLGD VSIPFATGAV WHRRQLFVAT PTTIECVFVD AGVADIDIET KRRKEEMKAR EAQSRAVEEH
0901: GDLALITVEA PQVTVSEKVP LRPPMLQVVR LASFQHAPSI PPFIVPKQSK FDGDDSVFQK ELDDRRYAEV AVAGGGVSVA VTRFPPEQKR PIGPLVVVGV
1001: RDGVLWLVDR YMCAHALSLS HPGIRCRCLA AYGDPVSAVK WATRLGREHH DDLAQFMLGM GYATEALHLP GISKRLEFDL AMQSNDLKRA LACLLTMSNS
1101: RDVGQETAAA DATDVTQILN LAVAKQAKQE SLADAVQGIV KFVKEFFDLI DAADATGQSD IAREVLKRLA AAASVKGALH GQMLRGLALR LANHGELTRL
1201: SGLVSNLITA GHGREAAFAA AVLGDNALME KAWQDTGMLA EAVLHAQAHG RPSLRNLVIT WNKMLQKELD HTPTVKTDAA AAFLASLEDP KLTSLGETEK
1301: KPPIEILPPG MPPLSAPPIV IKKSGTKPGL PNAVKASNGP IGAPMVQGAP MAQGTPGAQG IPMNQVTPSQ GSDEAKPLEA TVVDAAPTTS EGTAAPAAAE
1401: GTAAPSSEEA KAAPGSEGGT SHPINEEATA VAVSDAPGSP DAAAAAALAP AADTSSSDAP AVTPSEVTVS PPSTDAPELT DKPSPTEASL PPPPSVSGV
0101: TPDLCSCPRL PLASDNPAAA RGGRGEMLRL RAFRPTSDKV VKIQLHPTHP WLVTADANDR VSVWNWEHRQ VIYELKAGGV DERRLVGAKL EKLAEGDDSK
0201: GKPTEAIRGG SVKQVSFYDD DVRFWQHWRN CSAAAEAPTA VNQQSSMFSA PAPSTRGRHF VVICCENKVI FLDLVTMRGR DVPKQELDNR SLLCMEFLSR
0301: SSSSDAPLVA FGSSDGVIRV LSMLTWKLVR RYTGGHKGAI ACLMTYMSAA GEVHLVSGGN DGLLILWSAD HIHDSRELVP KISMKAHDGG VVAVELSRVM
0401: GSAPQLITIG ADKTLAIWDT VTFKEIRRIK PVPKLACHSV ASWCHPRAPN LDILTCVKDS HIWAIEHPTY SALTRPLCEL SSLVPPQVLA QHKKLRVYCM
0501: VAHPLQPHLV ATGTNIGVIL SEFDPRALPA IAPLPTPTGS KEHSAVYIVE RELKLLNFQL SNTANPSLGN AGVASDAGRS RNDSLEQLIV NQSKKHISTP
0601: APHDSYSVLS VSSSGKYVAI VWPDIPSFAV CKASDWSVVD SGTGKLFAWD TCRDRYALVE SALAPRMPLV VKGGSSKKAK EAAAAAAQAA AAAASAASAA
0701: TVQVRILLDD GTAHVLQRSI DGRSEPVTKT LLSSVMAVIF QVIGLHGGAL LGVTYRTSRR ISPLTATAIS TVQSMPLSGF GGSGSSFASD DPWETYQPVS
0801: GLLAQPEWTA WDQTVEYCAF AYQQYIVISS LRPQFRYLGD VSIPFATGAV WHRRQLFVAT PTTIECVFVD AGVADIDIET KRRKEEMKAR EAQSRAVEEH
0901: GDLALITVEA PQVTVSEKVP LRPPMLQVVR LASFQHAPSI PPFIVPKQSK FDGDDSVFQK ELDDRRYAEV AVAGGGVSVA VTRFPPEQKR PIGPLVVVGV
1001: RDGVLWLVDR YMCAHALSLS HPGIRCRCLA AYGDPVSAVK WATRLGREHH DDLAQFMLGM GYATEALHLP GISKRLEFDL AMQSNDLKRA LACLLTMSNS
1101: RDVGQETAAA DATDVTQILN LAVAKQAKQE SLADAVQGIV KFVKEFFDLI DAADATGQSD IAREVLKRLA AAASVKGALH GQMLRGLALR LANHGELTRL
1201: SGLVSNLITA GHGREAAFAA AVLGDNALME KAWQDTGMLA EAVLHAQAHG RPSLRNLVIT WNKMLQKELD HTPTVKTDAA AAFLASLEDP KLTSLGETEK
1301: KPPIEILPPG MPPLSAPPIV IKKSGTKPGL PNAVKASNGP IGAPMVQGAP MAQGTPGAQG IPMNQVTPSQ GSDEAKPLEA TVVDAAPTTS EGTAAPAAAE
1401: GTAAPSSEEA KAAPGSEGGT SHPINEEATA VAVSDAPGSP DAAAAAALAP AADTSSSDAP AVTPSEVTVS PPSTDAPELT DKPSPTEASL PPPPSVSGV
0001: MLRARAFRQT NGKIVKIQVH PTHPWLVTAD DSDHVSVWNW EHRQVIYELK AGGVDERRLV GAKLEKLAEG ESDYKAKPTE AIRGGSVKQV KFYDDDVRYW
0101: QLWRNRSAAA ESPSAVNHLT SAFTSPAPST KGRHFLVICC ENKAIFLDLV TMRGRDVPKQ ELDNKSLLCM EFLSRSSGGD GPLVAFGSTD GVIRVLSMIT
0201: WKLARRYTGG HKGSIYCLMN FMASSGEALL VSGGSDGLLV LWSADHGADS RELVPKLSLK AHDGGVVAVE LSRVSGSAPQ LITIGADKTL AIWDTMTFKE
0301: LRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWSI EHPTYSALTR PLCELSSLVP PQVLATHRKL RVYCMVAHPL QPHLVATGTN VGIIVSEFDP
0401: RAIPSAAPLP ALPGSRENSA IYILGRELKL LNFQLSNTAN PSLGNNSALS ESGLSKGDPG EQLTVKQTKK QIVAPVPHDS YSVLSVSSSG KYVAVVWPDI
0501: LYFSIYKVSD WSIVDSGSAR LLAWDTCRDR FAILESVLPH RMPIIPKGGS SRKAKEAAAA AAQAAAAASA ASSASVQVRI LLDDGTSNIL MRSVGGRSEP
0601: VIGLHGGALL GIGYRTSRRI SPVAATAIST IQSMPLSGFG NSNVSSFSSY DDGFSSQKSA ESAPLNYQLY SWENFEPVGG MLPQPEWTAW DQTVEYCAFA
0701: YQQYMVISSL RPQYRYLGDV AIAHATGAVW HRRQLFVATP TTIECVFVDA GVSEIDIETR KMKEEMKLKE AQARAVAEHG ELALITVEGS QAAKQERISL
0801: RPPMLQVVRL ASFQNAPSVP PFLSLPRQSR GDSDDIMDER RVNEVAVGGG GVSVAVTRFP VEQKRPVGPL VVAGVRDGVL WLIDRYMCAH AISLNHPGIR
0901: CRCLAAYGDA VSAVKWASRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR LEFDLAMQSN DLKRALHCLL TMSNSKDIGQ DGVGLDLSDI LSLTATKKED
1001: VVEAVEGIVK FAKEFLDLID AADATGHADI AREALKRLAT AGSVKGALQG HELRGLSLRL ANHGELTRLS GLVNNLISIG LGRESAFSAA VLGDNALMEK
1101: AWQDTGMLAE AVLHAHAHGR PTLKNLVQAW NKTLQKEVEK APSSKTDAAS AFLASLEDPK LTSLSDASRK PPIEILPPGM SSIFASITAP KKPLLTQKTA
1201: QPEVAKPLAL EEPTKPLAIE APPSSEAPQT ESAPETAAAA ESPAPETAAV AESPAPGTAA VAEAPASETA AAPVDGPVTE TVSEPPPVEK EETSLEEKSD
1301: PSSTPNTETA TSTENTSQTT TTPESVTTAP PEPITTAPPE TVTTTAVKPT ENAATERRVT NYPPIRSQPI DFDFLNG
0101: QLWRNRSAAA ESPSAVNHLT SAFTSPAPST KGRHFLVICC ENKAIFLDLV TMRGRDVPKQ ELDNKSLLCM EFLSRSSGGD GPLVAFGSTD GVIRVLSMIT
0201: WKLARRYTGG HKGSIYCLMN FMASSGEALL VSGGSDGLLV LWSADHGADS RELVPKLSLK AHDGGVVAVE LSRVSGSAPQ LITIGADKTL AIWDTMTFKE
0301: LRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWSI EHPTYSALTR PLCELSSLVP PQVLATHRKL RVYCMVAHPL QPHLVATGTN VGIIVSEFDP
0401: RAIPSAAPLP ALPGSRENSA IYILGRELKL LNFQLSNTAN PSLGNNSALS ESGLSKGDPG EQLTVKQTKK QIVAPVPHDS YSVLSVSSSG KYVAVVWPDI
0501: LYFSIYKVSD WSIVDSGSAR LLAWDTCRDR FAILESVLPH RMPIIPKGGS SRKAKEAAAA AAQAAAAASA ASSASVQVRI LLDDGTSNIL MRSVGGRSEP
0601: VIGLHGGALL GIGYRTSRRI SPVAATAIST IQSMPLSGFG NSNVSSFSSY DDGFSSQKSA ESAPLNYQLY SWENFEPVGG MLPQPEWTAW DQTVEYCAFA
0701: YQQYMVISSL RPQYRYLGDV AIAHATGAVW HRRQLFVATP TTIECVFVDA GVSEIDIETR KMKEEMKLKE AQARAVAEHG ELALITVEGS QAAKQERISL
0801: RPPMLQVVRL ASFQNAPSVP PFLSLPRQSR GDSDDIMDER RVNEVAVGGG GVSVAVTRFP VEQKRPVGPL VVAGVRDGVL WLIDRYMCAH AISLNHPGIR
0901: CRCLAAYGDA VSAVKWASRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR LEFDLAMQSN DLKRALHCLL TMSNSKDIGQ DGVGLDLSDI LSLTATKKED
1001: VVEAVEGIVK FAKEFLDLID AADATGHADI AREALKRLAT AGSVKGALQG HELRGLSLRL ANHGELTRLS GLVNNLISIG LGRESAFSAA VLGDNALMEK
1101: AWQDTGMLAE AVLHAHAHGR PTLKNLVQAW NKTLQKEVEK APSSKTDAAS AFLASLEDPK LTSLSDASRK PPIEILPPGM SSIFASITAP KKPLLTQKTA
1201: QPEVAKPLAL EEPTKPLAIE APPSSEAPQT ESAPETAAAA ESPAPETAAV AESPAPGTAA VAEAPASETA AAPVDGPVTE TVSEPPPVEK EETSLEEKSD
1301: PSSTPNTETA TSTENTSQTT TTPESVTTAP PEPITTAPPE TVTTTAVKPT ENAATERRVT NYPPIRSQPI DFDFLNG
Arabidopsis Description
Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KIH8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.