Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G042290.1 | Barley | mitochondrion | 5.27 | 98.72 |
| TraesCS3B01G263200.1 | Wheat | golgi, unclear | 87.95 | 94.49 |
| TraesCS3A01G236500.2 | Wheat | mitochondrion | 87.61 | 94.4 |
| TraesCS3D01G237000.1 | Wheat | mitochondrion | 87.41 | 91.54 |
| Os01t0653800-02 | Rice | plasma membrane | 83.71 | 88.82 |
| KXG33009 | Sorghum | mitochondrion | 83.3 | 88.19 |
| Zm00001d044026_P011 | Maize | mitochondrion | 81.11 | 81.44 |
| Zm00001d011483_P004 | Maize | mitochondrion | 82.61 | 80.52 |
| GSMUA_Achr1P28020_001 | Banana | mitochondrion | 67.9 | 79.23 |
| GSMUA_Achr6P21400_001 | Banana | mitochondrion | 70.16 | 77.53 |
| CDY19826 | Canola | mitochondrion | 62.42 | 73.61 |
| AT5G24710.1 | Thale cress | mitochondrion | 65.3 | 69.28 |
| CDX87116 | Canola | mitochondrion | 64.2 | 68.22 |
| VIT_05s0094g01650.t01 | Wine grape | cytosol | 3.29 | 66.67 |
| Bra028077.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, plastid | 5.34 | 45.61 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:22.1.4.4 | UniProt:A0A287L7M0 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | EnsemblPlantsGene:HORVU3Hr1G058910 | EnsemblPlants:HORVU3Hr1G058910.1 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR45521 | SMART:SM00320 | SUPFAM:SSF50978 |
| UniParc:UPI000B4892CB | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:445382766..445407511
Molecular Weight (calculated)
155778.0 Da
IEP (calculated)
7.664
GRAVY (calculated)
-0.138
Length
1461 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKCYPVQTNN QAVKGHQKVN KPSLLSSSSA SLPSLKSLVA TQISPSSVPT PASYHNTAHL ICSPPGSPDL SRSSLHPPLA RYDVAAARGG HGEMLRLRAF
0101: RPTSDKVVKI QLHPTHPWLV TADANDRVSV WDWEHRQVIY ELKAGGVDER RLVGVKLEKL AEGETDSKGK PTEAIRGGSV KQVSFYDDDV RFWQHWRNCS
0201: AASEAPTAVN QQSSAFSAPA PSTRGRHFVV ICCENKAIFL DLVTMRGRDV PKQELDNKSL LCMEFLSRSS SSDAPLVAFG ASDGVIRVLS MMTWKLVRRY
0301: TGGHKGAISC LMTFMSAAGE VHLVSGGSDG LLVLWSADHI HDSRELVPKI SLKAHDGGVV AVELSRVMGS APQLITIGAD KTLAIWDTVT FKEIRRIKPV
0401: PKLACHSVAS WCHPRAPNLD ILTCVKDSHI WAIEHPTYSA LTRPLCELSS LVPPQALAQH KKLRVYCMVA HPLQPHLVAT GTNIGIILSE FDPRALPAVA
0501: PLPALTESKE HSAVYIVERE LKLLNFQLSN TANPSLGSAS ETGRSRNETI DQLIVKQSKK HISTPAPHDS YSILSASSSG KYVAVVWPDI PSFVVYKASD
0601: WSVVDSGTGK LFAWDSCRDR YALVESALAP RMPLIVKGGS SKKAKEAAAA AAQAAAAAAS AASTATVQVR ILLDDGTAHV LQRSIDGRSE PVVGLHGGAL
0701: LGVTYRTSRR ISPLTATAIS TVQSMPLSGF GGSGSSFASD DPFSSREGPP QNFQLYSWET YQPVSGLLAQ PEWTVWDQTV EYCAFAYQQY IVISSLRPQF
0801: RYLGDVSIPS ATGAVWHRRQ LFVATPTTIE CVFVDAGVAA IDIETKKRKE EMKAREAQGR AVADHGDLAL ITVEGPQVTA SEKISLRPSM LQVVRLASFQ
0901: HAPSIPPFIV PKQSKLNGDD SVFLKELDDR RYSEVAVAGG GVSVAVTRFP SEQKRPIGPL VLVGVRDGVL WLVDRYMCAH ALSLSHPGIR CRCLAAYGDP
1001: VSAVKWATRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR LEFDLAMQSK DLKRALACLL TMSNSRDVGQ ETTATDVTQI LNLAVAKQAK QESLADAVQG
1101: IVKFVKEFFD LIDAADATGQ AEIAREVLKR LAAAASVKGA LHGQTLRGLA LRLANHGELT RLSGLVANLI TAGHGREAAF AAAVLGDNAL MEKAWQDTGM
1201: LAEAVLHAQA HGRPSLRSSV ITWNKMLQKE LDHTPTVKTD AAAAFLASLE DPKLTSLGET EKKPPIEILP PGMPPLSAPP IIIKKAAAKP GLANASQTLN
1301: AGAPMNQGTP MVQGTPMNQS TPMAQGTPMN QGTPMAQATP LAQGPPAPAQ STDEVKPSEA TAAPDNVEAT AATSNAEATE APGTAEATEA SVPDPTSSSP
1401: DAAAAAPAPA PAADSSGTDA LAVTPSDSTD DAPSSTKVPE TQDKPPSTEA SPSPPPSISA V
0101: RPTSDKVVKI QLHPTHPWLV TADANDRVSV WDWEHRQVIY ELKAGGVDER RLVGVKLEKL AEGETDSKGK PTEAIRGGSV KQVSFYDDDV RFWQHWRNCS
0201: AASEAPTAVN QQSSAFSAPA PSTRGRHFVV ICCENKAIFL DLVTMRGRDV PKQELDNKSL LCMEFLSRSS SSDAPLVAFG ASDGVIRVLS MMTWKLVRRY
0301: TGGHKGAISC LMTFMSAAGE VHLVSGGSDG LLVLWSADHI HDSRELVPKI SLKAHDGGVV AVELSRVMGS APQLITIGAD KTLAIWDTVT FKEIRRIKPV
0401: PKLACHSVAS WCHPRAPNLD ILTCVKDSHI WAIEHPTYSA LTRPLCELSS LVPPQALAQH KKLRVYCMVA HPLQPHLVAT GTNIGIILSE FDPRALPAVA
0501: PLPALTESKE HSAVYIVERE LKLLNFQLSN TANPSLGSAS ETGRSRNETI DQLIVKQSKK HISTPAPHDS YSILSASSSG KYVAVVWPDI PSFVVYKASD
0601: WSVVDSGTGK LFAWDSCRDR YALVESALAP RMPLIVKGGS SKKAKEAAAA AAQAAAAAAS AASTATVQVR ILLDDGTAHV LQRSIDGRSE PVVGLHGGAL
0701: LGVTYRTSRR ISPLTATAIS TVQSMPLSGF GGSGSSFASD DPFSSREGPP QNFQLYSWET YQPVSGLLAQ PEWTVWDQTV EYCAFAYQQY IVISSLRPQF
0801: RYLGDVSIPS ATGAVWHRRQ LFVATPTTIE CVFVDAGVAA IDIETKKRKE EMKAREAQGR AVADHGDLAL ITVEGPQVTA SEKISLRPSM LQVVRLASFQ
0901: HAPSIPPFIV PKQSKLNGDD SVFLKELDDR RYSEVAVAGG GVSVAVTRFP SEQKRPIGPL VLVGVRDGVL WLVDRYMCAH ALSLSHPGIR CRCLAAYGDP
1001: VSAVKWATRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR LEFDLAMQSK DLKRALACLL TMSNSRDVGQ ETTATDVTQI LNLAVAKQAK QESLADAVQG
1101: IVKFVKEFFD LIDAADATGQ AEIAREVLKR LAAAASVKGA LHGQTLRGLA LRLANHGELT RLSGLVANLI TAGHGREAAF AAAVLGDNAL MEKAWQDTGM
1201: LAEAVLHAQA HGRPSLRSSV ITWNKMLQKE LDHTPTVKTD AAAAFLASLE DPKLTSLGET EKKPPIEILP PGMPPLSAPP IIIKKAAAKP GLANASQTLN
1301: AGAPMNQGTP MVQGTPMNQS TPMAQGTPMN QGTPMAQATP LAQGPPAPAQ STDEVKPSEA TAAPDNVEAT AATSNAEATE APGTAEATEA SVPDPTSSSP
1401: DAAAAAPAPA PAADSSGTDA LAVTPSDSTD DAPSSTKVPE TQDKPPSTEA SPSPPPSISA V
0001: MLRARAFRQT NGKIVKIQVH PTHPWLVTAD DSDHVSVWNW EHRQVIYELK AGGVDERRLV GAKLEKLAEG ESDYKAKPTE AIRGGSVKQV KFYDDDVRYW
0101: QLWRNRSAAA ESPSAVNHLT SAFTSPAPST KGRHFLVICC ENKAIFLDLV TMRGRDVPKQ ELDNKSLLCM EFLSRSSGGD GPLVAFGSTD GVIRVLSMIT
0201: WKLARRYTGG HKGSIYCLMN FMASSGEALL VSGGSDGLLV LWSADHGADS RELVPKLSLK AHDGGVVAVE LSRVSGSAPQ LITIGADKTL AIWDTMTFKE
0301: LRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWSI EHPTYSALTR PLCELSSLVP PQVLATHRKL RVYCMVAHPL QPHLVATGTN VGIIVSEFDP
0401: RAIPSAAPLP ALPGSRENSA IYILGRELKL LNFQLSNTAN PSLGNNSALS ESGLSKGDPG EQLTVKQTKK QIVAPVPHDS YSVLSVSSSG KYVAVVWPDI
0501: LYFSIYKVSD WSIVDSGSAR LLAWDTCRDR FAILESVLPH RMPIIPKGGS SRKAKEAAAA AAQAAAAASA ASSASVQVRI LLDDGTSNIL MRSVGGRSEP
0601: VIGLHGGALL GIGYRTSRRI SPVAATAIST IQSMPLSGFG NSNVSSFSSY DDGFSSQKSA ESAPLNYQLY SWENFEPVGG MLPQPEWTAW DQTVEYCAFA
0701: YQQYMVISSL RPQYRYLGDV AIAHATGAVW HRRQLFVATP TTIECVFVDA GVSEIDIETR KMKEEMKLKE AQARAVAEHG ELALITVEGS QAAKQERISL
0801: RPPMLQVVRL ASFQNAPSVP PFLSLPRQSR GDSDDIMDER RVNEVAVGGG GVSVAVTRFP VEQKRPVGPL VVAGVRDGVL WLIDRYMCAH AISLNHPGIR
0901: CRCLAAYGDA VSAVKWASRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR LEFDLAMQSN DLKRALHCLL TMSNSKDIGQ DGVGLDLSDI LSLTATKKED
1001: VVEAVEGIVK FAKEFLDLID AADATGHADI AREALKRLAT AGSVKGALQG HELRGLSLRL ANHGELTRLS GLVNNLISIG LGRESAFSAA VLGDNALMEK
1101: AWQDTGMLAE AVLHAHAHGR PTLKNLVQAW NKTLQKEVEK APSSKTDAAS AFLASLEDPK LTSLSDASRK PPIEILPPGM SSIFASITAP KKPLLTQKTA
1201: QPEVAKPLAL EEPTKPLAIE APPSSEAPQT ESAPETAAAA ESPAPETAAV AESPAPGTAA VAEAPASETA AAPVDGPVTE TVSEPPPVEK EETSLEEKSD
1301: PSSTPNTETA TSTENTSQTT TTPESVTTAP PEPITTAPPE TVTTTAVKPT ENAATERRVT NYPPIRSQPI DFDFLNG
0101: QLWRNRSAAA ESPSAVNHLT SAFTSPAPST KGRHFLVICC ENKAIFLDLV TMRGRDVPKQ ELDNKSLLCM EFLSRSSGGD GPLVAFGSTD GVIRVLSMIT
0201: WKLARRYTGG HKGSIYCLMN FMASSGEALL VSGGSDGLLV LWSADHGADS RELVPKLSLK AHDGGVVAVE LSRVSGSAPQ LITIGADKTL AIWDTMTFKE
0301: LRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWSI EHPTYSALTR PLCELSSLVP PQVLATHRKL RVYCMVAHPL QPHLVATGTN VGIIVSEFDP
0401: RAIPSAAPLP ALPGSRENSA IYILGRELKL LNFQLSNTAN PSLGNNSALS ESGLSKGDPG EQLTVKQTKK QIVAPVPHDS YSVLSVSSSG KYVAVVWPDI
0501: LYFSIYKVSD WSIVDSGSAR LLAWDTCRDR FAILESVLPH RMPIIPKGGS SRKAKEAAAA AAQAAAAASA ASSASVQVRI LLDDGTSNIL MRSVGGRSEP
0601: VIGLHGGALL GIGYRTSRRI SPVAATAIST IQSMPLSGFG NSNVSSFSSY DDGFSSQKSA ESAPLNYQLY SWENFEPVGG MLPQPEWTAW DQTVEYCAFA
0701: YQQYMVISSL RPQYRYLGDV AIAHATGAVW HRRQLFVATP TTIECVFVDA GVSEIDIETR KMKEEMKLKE AQARAVAEHG ELALITVEGS QAAKQERISL
0801: RPPMLQVVRL ASFQNAPSVP PFLSLPRQSR GDSDDIMDER RVNEVAVGGG GVSVAVTRFP VEQKRPVGPL VVAGVRDGVL WLIDRYMCAH AISLNHPGIR
0901: CRCLAAYGDA VSAVKWASRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR LEFDLAMQSN DLKRALHCLL TMSNSKDIGQ DGVGLDLSDI LSLTATKKED
1001: VVEAVEGIVK FAKEFLDLID AADATGHADI AREALKRLAT AGSVKGALQG HELRGLSLRL ANHGELTRLS GLVNNLISIG LGRESAFSAA VLGDNALMEK
1101: AWQDTGMLAE AVLHAHAHGR PTLKNLVQAW NKTLQKEVEK APSSKTDAAS AFLASLEDPK LTSLSDASRK PPIEILPPGM SSIFASITAP KKPLLTQKTA
1201: QPEVAKPLAL EEPTKPLAIE APPSSEAPQT ESAPETAAAA ESPAPETAAV AESPAPGTAA VAEAPASETA AAPVDGPVTE TVSEPPPVEK EETSLEEKSD
1301: PSSTPNTETA TSTENTSQTT TTPESVTTAP PEPITTAPPE TVTTTAVKPT ENAATERRVT NYPPIRSQPI DFDFLNG
Arabidopsis Description
Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KIH8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.