Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G009600.1 | Wheat | golgi | 95.5 | 98.77 |
| TraesCS4A01G485300.1 | Wheat | cytosol | 95.38 | 98.53 |
| TraesCS7A01G009900.1 | Wheat | cytosol | 93.48 | 98.13 |
| Os09t0407950-01 | Rice | plasma membrane | 52.25 | 88.82 |
| KXG38043 | Sorghum | cytosol | 86.85 | 88.53 |
| Zm00001d033368_P007 | Maize | cytosol | 84.12 | 85.75 |
| Os09t0408000-01 | Rice | cytosol, nucleus | 24.35 | 84.57 |
| VIT_00s1373g00010.t01 | Wine grape | cytosol | 7.29 | 78.85 |
| KRH28498 | Soybean | cytosol | 9.48 | 75.12 |
| GSMUA_Achr10P... | Banana | cytosol | 69.14 | 74.0 |
| Solyc02g090570.2.1 | Tomato | nucleus | 64.99 | 67.72 |
| Bra036092.1-P | Field mustard | cytosol | 61.32 | 66.52 |
| KRH04644 | Soybean | endoplasmic reticulum | 63.68 | 66.28 |
| KRH57890 | Soybean | endoplasmic reticulum | 63.57 | 66.15 |
| AT3G50590.1 | Thale cress | cytosol | 62.74 | 65.61 |
| CDX77930 | Canola | cytosol | 63.09 | 65.3 |
| KRH76964 | Soybean | nucleus | 62.56 | 65.1 |
| CDY17791 | Canola | cytosol | 63.03 | 64.92 |
| VIT_00s0961g00020.t01 | Wine grape | cytosol, extracellular, plastid | 6.81 | 47.13 |
| VIT_00s0783g00010.t01 | Wine grape | cytosol | 14.81 | 44.09 |
| CDY26515 | Canola | cytosol, nucleus, plastid | 5.98 | 39.92 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:22.1.4.4 | UniProt:A0A287RL62 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0016020 | EnsemblPlantsGene:HORVU5Hr1G067090 | EnsemblPlants:HORVU5Hr1G067090.1 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19878 |
| PANTHER:PTHR19878:SF4 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000B46A770 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:510161801..510172518
Molecular Weight (calculated)
183210.0 Da
IEP (calculated)
8.602
GRAVY (calculated)
-0.192
Length
1688 amino acids
Sequence
(BLAST)
(BLAST)
0001: FRSRQYSLAE SHLLVSSPGE ERRAERDQIP PPTDRPAAGR SEPVLADPLR SARLGGAMEW ETVQHLDLRH AGGRRGAGAP ARPLQPHAAA FRASQAIVAV
0101: AVGTHVVEFD ALTGSKIALV DLGARVVRMA YSPTSSHVII AILEDATIRS CDFATEQTLV LHSPEKKTDH VSIDTEVHLA LTPLEPIVFF GFHKRMSVTV
0201: VGTVEGGRPP TKIKTDLKKP IVNLACHPRL PVFYVAYAEG LVRAYNVQTY AVHYTLQLPV DSTIKLMGAG AFGFHPTLEW VFIGDRGGTL LAWDVSTERP
0301: NMIGITQAGS QPITSVSWLP TLKLLVTISK DGGLQVWKTR VIINNNRQPM ETHFFERAAI ETMDITKILT LQGGEAVYPL PRIKNLAVHP KFNLAAVIFQ
0401: DMSATEAAKN KAAYTREGRR QLFAVLQGAR GSTAAVLKEK LLALGSSGIL AEHQLQAQLQ EQHLKGQSKL TISDVARKAF LHSHFMEGHA KSGPISRLPL
0501: VTISDPSNLL RDIPVCQPFH LELNFFNQEN RVVQYPVRAF YLDGFNLMAH NLSSGAENLY KKLYSTIPSN MECHPKYISY SPKQHMFLVV FELSGPSGVA
0601: HEVVLYWEQT DLQTVNSKGS SIKGRDATFL GPDDNQYAIL EDDRTSLNLY NLKPIATKEA LENNAAVLEE ENTFAENPTA NPTQKQGPMQ FTFESEVDRI
0701: FSSPQESSLL YVISGKHIGL AKLLTGYRLS TDNGLSITTK TEGKKFIKLK PNETVLQVHW QTTLRGPVAG ILTNQRVLIA SADLDILSSS STKYDRGLPS
0801: YRSMLWVGPA LIFSSATAIS MLGWDNKVRS ILSTSFPRSV LLGALNDRLL LVNPTDINPR QKKGVEIRSC LVGLLEPLLI GFATMQQHFT QKIDLSEVLY
0901: QITSRFDSLR VTPKSLDILS KGPPVCGDLA VSLSQAGPQF TQIMRCNYAI KSLRFSAALS ILKDEFLRSR DYPQCPPTSH LFQRFRELGY ACIKYGQFDS
1001: AKETFEAIAD HESMLDLFIC HLNPSALRRL AQKLEESGTD PELRRYLERI LRVRSTGWTQ GVFANFAAES MVPKGPEWAG GNWEIKTPTS MKSIPQWELA
1101: GEVMPYMRTT DAAIPSVIAD HIGVYLGVMK GRGNVVEVSE KSLVKAMAAA SSENAQPTSS ELALKNKANA AGDSVGDSLA RQLGVQIASA DEQAKAAEEF
1201: KKTLYGVVDA GSSDEDESTS KTKRIQIRIR DKPAAPAVDV NKLKEATKQL GLMAPPISRT RSLSGTPQEL AQPAGPAPSA APAMPSGAVD FFGNTLVAPP
1301: QAPAGGTGPV IGGLGVTAGP IPEDFFQNTV PSQQLANRLP PPGAILQRMA NPDSGMNVGR PVPNQNMTGN VGLPDGGVPP QGPQQGQFAQ QQGQFSQQQG
1401: IPMNPIGLPD GGVPPQSQAL PSQPQGFQPA VPTPSQPIDL SALEGPGAAK QVAQPPAPKA VRPGQVPRGA PAAECYRMGL AHLEQNQLTD ALNCLDEAFL
1501: ALAKDQSREA DIKAQATICA QYKIAVSLLQ EIARLQRVQG AGTLSAKEEM GRLSRHLASL PIQAKHRINC IRTAIKRNME VQNFAYAKQM LDLLYSKAPP
1601: TKQDELKSLI DMCVQRGLTN KSIDPFEDPS QFCAVTLSRL STIGHDVCDL CGAKFSALSA PGCVICGMGS IKRSDALAGA GPVASPFG
0101: AVGTHVVEFD ALTGSKIALV DLGARVVRMA YSPTSSHVII AILEDATIRS CDFATEQTLV LHSPEKKTDH VSIDTEVHLA LTPLEPIVFF GFHKRMSVTV
0201: VGTVEGGRPP TKIKTDLKKP IVNLACHPRL PVFYVAYAEG LVRAYNVQTY AVHYTLQLPV DSTIKLMGAG AFGFHPTLEW VFIGDRGGTL LAWDVSTERP
0301: NMIGITQAGS QPITSVSWLP TLKLLVTISK DGGLQVWKTR VIINNNRQPM ETHFFERAAI ETMDITKILT LQGGEAVYPL PRIKNLAVHP KFNLAAVIFQ
0401: DMSATEAAKN KAAYTREGRR QLFAVLQGAR GSTAAVLKEK LLALGSSGIL AEHQLQAQLQ EQHLKGQSKL TISDVARKAF LHSHFMEGHA KSGPISRLPL
0501: VTISDPSNLL RDIPVCQPFH LELNFFNQEN RVVQYPVRAF YLDGFNLMAH NLSSGAENLY KKLYSTIPSN MECHPKYISY SPKQHMFLVV FELSGPSGVA
0601: HEVVLYWEQT DLQTVNSKGS SIKGRDATFL GPDDNQYAIL EDDRTSLNLY NLKPIATKEA LENNAAVLEE ENTFAENPTA NPTQKQGPMQ FTFESEVDRI
0701: FSSPQESSLL YVISGKHIGL AKLLTGYRLS TDNGLSITTK TEGKKFIKLK PNETVLQVHW QTTLRGPVAG ILTNQRVLIA SADLDILSSS STKYDRGLPS
0801: YRSMLWVGPA LIFSSATAIS MLGWDNKVRS ILSTSFPRSV LLGALNDRLL LVNPTDINPR QKKGVEIRSC LVGLLEPLLI GFATMQQHFT QKIDLSEVLY
0901: QITSRFDSLR VTPKSLDILS KGPPVCGDLA VSLSQAGPQF TQIMRCNYAI KSLRFSAALS ILKDEFLRSR DYPQCPPTSH LFQRFRELGY ACIKYGQFDS
1001: AKETFEAIAD HESMLDLFIC HLNPSALRRL AQKLEESGTD PELRRYLERI LRVRSTGWTQ GVFANFAAES MVPKGPEWAG GNWEIKTPTS MKSIPQWELA
1101: GEVMPYMRTT DAAIPSVIAD HIGVYLGVMK GRGNVVEVSE KSLVKAMAAA SSENAQPTSS ELALKNKANA AGDSVGDSLA RQLGVQIASA DEQAKAAEEF
1201: KKTLYGVVDA GSSDEDESTS KTKRIQIRIR DKPAAPAVDV NKLKEATKQL GLMAPPISRT RSLSGTPQEL AQPAGPAPSA APAMPSGAVD FFGNTLVAPP
1301: QAPAGGTGPV IGGLGVTAGP IPEDFFQNTV PSQQLANRLP PPGAILQRMA NPDSGMNVGR PVPNQNMTGN VGLPDGGVPP QGPQQGQFAQ QQGQFSQQQG
1401: IPMNPIGLPD GGVPPQSQAL PSQPQGFQPA VPTPSQPIDL SALEGPGAAK QVAQPPAPKA VRPGQVPRGA PAAECYRMGL AHLEQNQLTD ALNCLDEAFL
1501: ALAKDQSREA DIKAQATICA QYKIAVSLLQ EIARLQRVQG AGTLSAKEEM GRLSRHLASL PIQAKHRINC IRTAIKRNME VQNFAYAKQM LDLLYSKAPP
1601: TKQDELKSLI DMCVQRGLTN KSIDPFEDPS QFCAVTLSRL STIGHDVCDL CGAKFSALSA PGCVICGMGS IKRSDALAGA GPVASPFG
0001: MEWATVQHLD LRHVGRGVSK PLQPHTAAFH PSQAVIAVAV GSHIMEFDAL TGCKIASIDI GSPAVRMLYS PTSSNAVVAI LEDCTIRSCD FETEQTCVLH
0101: SPEKRSEHIS SDTEVHLAVT PLQPVVFFGF PKRMSVTVVG TVEGGRAPTK IKTDLKKPIV NIACHPRLPV LYVAYAEGLI RAYNIHTYAV HYTLQLDNTI
0201: KLIGASSFAF HPTLEWIFVG DRRGTLLAWD VSTERPNMIG ITQVGSQPIT SISWLPMLRV LVTVSKDGSL QVWKTRVIIN PNRPSTQTNF FEPAAMESID
0301: IPKILSQQGG EAVYPLPRIK TLEVHPKLNL AALIFANMVG NENTQNRAAQ TREGRKQLFA VLQSARGSSA SVLKEKLSSM GSSGILAEHQ LQALLQEHKG
0401: QSQLTISDIA RKAFLYSHFM EGHAKTAPIS RLPLITVVDT KDQLKDIPVC QPFHLELNFF NKPNRVLHYP VRSFYIEGLN LMAHNLCSGT DNIYKKLYTS
0501: IPGNVEYHSK HIVYSRKRHL FLVVFEFSGA TNEVVLYWEN TGSQLPNSKG STAKGCDAAF IGPNDDQFAI LDEDKTGLSM YILPKLTTME ENEKNLLSEE
0601: NQKKEADPSG IQGPQQFMFE TEVDRVFSTP IESTLMFACN GTQIGLAKLF QGYRLSASDG HYISTQGEGR KSIKLKKHEI ALQVQWQETP RGYVAGILTT
0701: QRVLMVSADF DILASSSTKY DRGLPSFRSL LWVGPALLFS TTTAVCLLGW DGKVRTILSI STPYAALVGA LNDRLLLAHP TDISPKQKKG IEIKSCLVGL
0801: LEPLLIGFST MQQTFEQKVD LSEILYQITT RFDSLRITPR SLDILARSAP VCGDLAVSLA QAGPQFNQVL RCAYAIKALR FSTALSVLKD EFLRSRDYPK
0901: CPPTSLLFQR FRQLGYACIK YGQFDSAKET FEVIGDYESM LDLFICHLNP SAMRRLAQKL EEESGDPELR RYCERILRVR STGWTQGIFA NFAAESMVPK
1001: GPEWGGGNWE IKTPTDMKSI PKWELAGEVM PYMKNEDGTI PSIVADHIGV YLGCVKGRVN VVEIKEDSLV SKPGGLSLLG KPVSDKPLAL PAGESSSMMG
1101: LESLGKQNVA DEQAKAAEEF KKTMYGATGD GSSSDEEGVT KPKKLQIRIR EKPTSTTVDV NKLKEAAKTF KLGDGLGLTM SRTKSINAGS QDLGQMLSQP
1201: SSSTVATTTA PSSASAPVDP FAMSSWTQQP QPVSQPAPPG VAAPIPEDFF QNTIPSVEVA KTLPPPGTYL SKMDQAARAA IAAQGGPNQA NNTPLPDIGL
1301: PDGGVPQQYP QQTSQQPGAP FQTVGLPDGG VRQQYPGQNQ VPSQVPVSTQ PLDLSVLGVP NTGDSGKPPG QPQSPPASVR PGQVPRGAAA PVCFKTGLAH
1401: LEQNQLPDAL SCFDEAFLAL AKDQSRGADI KAQATICAQY KIAVTLLREI LRLQRVQGAS ALSAKDEMAR LSRHLASLPL LAKHRINCIR TAIKRNMEVQ
1501: NYGYSKQMLE LLLSKAPASK QEELRGLVDL CVQRGTSNKS IDPLEDPSQL CSATLSRLST IGYDVCDLCG AKFAALSSPG CIICGMGSIK RSDALAGPAP
1601: VSTPFG
0101: SPEKRSEHIS SDTEVHLAVT PLQPVVFFGF PKRMSVTVVG TVEGGRAPTK IKTDLKKPIV NIACHPRLPV LYVAYAEGLI RAYNIHTYAV HYTLQLDNTI
0201: KLIGASSFAF HPTLEWIFVG DRRGTLLAWD VSTERPNMIG ITQVGSQPIT SISWLPMLRV LVTVSKDGSL QVWKTRVIIN PNRPSTQTNF FEPAAMESID
0301: IPKILSQQGG EAVYPLPRIK TLEVHPKLNL AALIFANMVG NENTQNRAAQ TREGRKQLFA VLQSARGSSA SVLKEKLSSM GSSGILAEHQ LQALLQEHKG
0401: QSQLTISDIA RKAFLYSHFM EGHAKTAPIS RLPLITVVDT KDQLKDIPVC QPFHLELNFF NKPNRVLHYP VRSFYIEGLN LMAHNLCSGT DNIYKKLYTS
0501: IPGNVEYHSK HIVYSRKRHL FLVVFEFSGA TNEVVLYWEN TGSQLPNSKG STAKGCDAAF IGPNDDQFAI LDEDKTGLSM YILPKLTTME ENEKNLLSEE
0601: NQKKEADPSG IQGPQQFMFE TEVDRVFSTP IESTLMFACN GTQIGLAKLF QGYRLSASDG HYISTQGEGR KSIKLKKHEI ALQVQWQETP RGYVAGILTT
0701: QRVLMVSADF DILASSSTKY DRGLPSFRSL LWVGPALLFS TTTAVCLLGW DGKVRTILSI STPYAALVGA LNDRLLLAHP TDISPKQKKG IEIKSCLVGL
0801: LEPLLIGFST MQQTFEQKVD LSEILYQITT RFDSLRITPR SLDILARSAP VCGDLAVSLA QAGPQFNQVL RCAYAIKALR FSTALSVLKD EFLRSRDYPK
0901: CPPTSLLFQR FRQLGYACIK YGQFDSAKET FEVIGDYESM LDLFICHLNP SAMRRLAQKL EEESGDPELR RYCERILRVR STGWTQGIFA NFAAESMVPK
1001: GPEWGGGNWE IKTPTDMKSI PKWELAGEVM PYMKNEDGTI PSIVADHIGV YLGCVKGRVN VVEIKEDSLV SKPGGLSLLG KPVSDKPLAL PAGESSSMMG
1101: LESLGKQNVA DEQAKAAEEF KKTMYGATGD GSSSDEEGVT KPKKLQIRIR EKPTSTTVDV NKLKEAAKTF KLGDGLGLTM SRTKSINAGS QDLGQMLSQP
1201: SSSTVATTTA PSSASAPVDP FAMSSWTQQP QPVSQPAPPG VAAPIPEDFF QNTIPSVEVA KTLPPPGTYL SKMDQAARAA IAAQGGPNQA NNTPLPDIGL
1301: PDGGVPQQYP QQTSQQPGAP FQTVGLPDGG VRQQYPGQNQ VPSQVPVSTQ PLDLSVLGVP NTGDSGKPPG QPQSPPASVR PGQVPRGAAA PVCFKTGLAH
1401: LEQNQLPDAL SCFDEAFLAL AKDQSRGADI KAQATICAQY KIAVTLLREI LRLQRVQGAS ALSAKDEMAR LSRHLASLPL LAKHRINCIR TAIKRNMEVQ
1501: NYGYSKQMLE LLLSKAPASK QEELRGLVDL CVQRGTSNKS IDPLEDPSQL CSATLSRLST IGYDVCDLCG AKFAALSSPG CIICGMGSIK RSDALAGPAP
1601: VSTPFG
Arabidopsis Description
Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J0P2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.