Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033368_P007 | Maize | cytosol | 94.69 | 94.69 |
| TraesCS7D01G009600.1 | Wheat | golgi | 88.77 | 90.07 |
| Os09t0408000-01 | Rice | cytosol, nucleus | 26.39 | 89.92 |
| TraesCS4A01G485300.1 | Wheat | cytosol | 88.65 | 89.84 |
| TraesCS7A01G009900.1 | Wheat | cytosol | 87.2 | 89.8 |
| Os09t0407950-01 | Rice | plasma membrane | 53.32 | 88.92 |
| HORVU5Hr1G067090.1 | Barley | cytosol | 88.53 | 86.85 |
| VIT_00s1373g00010.t01 | Wine grape | cytosol | 7.61 | 80.77 |
| GSMUA_Achr10P... | Banana | cytosol | 72.46 | 76.09 |
| KRH28498 | Soybean | cytosol | 9.72 | 75.59 |
| Solyc02g090570.2.1 | Tomato | nucleus | 67.45 | 68.95 |
| Bra036092.1-P | Field mustard | cytosol | 64.31 | 68.44 |
| KRH04644 | Soybean | endoplasmic reticulum | 66.3 | 67.69 |
| KRH57890 | Soybean | endoplasmic reticulum | 66.06 | 67.45 |
| AT3G50590.1 | Thale cress | cytosol | 65.4 | 67.1 |
| CDX77930 | Canola | cytosol | 65.94 | 66.95 |
| CDY17791 | Canola | cytosol | 65.88 | 66.56 |
| KRH76964 | Soybean | nucleus | 65.16 | 66.52 |
| VIT_00s0961g00020.t01 | Wine grape | cytosol, extracellular, plastid | 7.61 | 51.64 |
| VIT_00s0783g00010.t01 | Wine grape | cytosol | 15.7 | 45.86 |
| CDY26515 | Canola | cytosol, nucleus, plastid | 6.16 | 40.32 |
Protein Annotations
| Gene3D:2.130.10.10 | MapMan:22.1.4.4 | UniProt:A0A1B6QJE5 | InterPro:Coatomer_asu_C | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030126 | InterPro:Haem_d1_sf | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | EnsemblPlants:KXG38043 | ProteinID:KXG38043 | ProteinID:KXG38043.1 | PFAM:PF06957 | PFscan:PS50082 |
| PFscan:PS50294 | PANTHER:PTHR19878 | PANTHER:PTHR19878:SF4 | InterPro:Quinoprotein_ADH-like_supfam | SMART:SM00320 | EnsemblPlantsGene:SORBI_3001G170100 |
| SUPFAM:SSF50998 | SUPFAM:SSF51004 | UniParc:UPI00081AE561 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:14194289..14205910
Molecular Weight (calculated)
179353.0 Da
IEP (calculated)
8.213
GRAVY (calculated)
-0.159
Length
1656 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPEQSRSGAP MEWTTVQHLD LRHSGGRRGA SARPMQPHAA AFRSSQAIVA VAIGTHVVEF DALTGSKIAS IDLGARVVRM AYSPTTSHVV IAILEDATIR
0101: SCDFATEQTL VLHSPEKKSE HVSIDTEVHL ALTPLEPIVF FGFHKRMSVT VVGTVDGGRP PTKIKTDLKK PIVNLACHPR LPVLYVAYAE GLIRAYNIQT
0201: YAVHYTLQLA VDSTIKLMGA GAFGFHPTLE WIFVGDRGGT LLAWDVSTER PSMIGITQAG SQPITSVSWL PTLRLLVTIS KDGALQVWKT RVIINPNRQP
0301: METHFFERAA IETMDITKIL TLQGGEAVYP LPRIKNLAVH PKFNLAAVIF VDMSGTEAAK NKAAYTREGR RQLFALLQGA RGSTAAVLKE KLLALGSSGI
0401: LAEHQLQAQL QEQHLKGQSQ LTISDVARKA FLHSHFMEGH AKSGPISRLP LVTISDSSDL LRDVPVCQPF HLELNFFNKE TRVVQYPVRA FYMDGFNLMA
0501: HNLASGADNL YKKLYSTIPS NVECHPKNMS YSPKQHLFLV VFELSGTAGV AHEVVLYWEQ TDLQTVNSKG SSIRGRDAAF LGPDDNQYAI LEEDRTSLSL
0601: FSLKAVATKE ALENNAAVLE ENTFADNAAN STERQGPLQF TFESEVDRIF SSPLESTLLY VISGKHIGLA KLLQGYRLST DNGLSITTKT DGKKFIKLKP
0701: NETVLQAHWQ TTLRGPVVGI LTNQRVLIAS ADLDILSSSS TKFDHGLPSY RSMLWVGPAL IFSSATAISM LGWDNKVRSI LSTSFPRSVL LGALNDRLLL
0801: VNPTDINPRQ KKGVEIRGCL VGLLEPLLIG FATMQQHFEQ KLDLSEVLYQ ITSRFDSLRI TPRSLDILTK GPPVCGDLAV SLSQAGPQFT QIMRCNYAIK
0901: ALRFSTALSI LKDEFLRSRD YPQCPPTSHL FQRFRELGYA CIKYGQFDSA KETFEVITDH ESMLDLFICH LNPSALRRLA QKLEESGTDS ELRRYLERIL
1001: RVRSTGWTQG VFANFAAESM VPKGPEWAGG NWEIKTPTNI KNIPQWELAG EVMPYMKTTD AGIPSVVADH IGVYLGVMKG RGNVVEVSEK SLVKAIAAAS
1101: SENAQAASSA SAEKNKAIAG GDSVGDTLAR QLGVQIASAD EQAKAAEEFK KTLYGVVDDG SSDEDESTSK TKKIHIRIRD KPAAPTVDVN KLKEATKQIG
1201: LGPPPLSRTR SLSGTPQDFN QAPTQPGGPA AAVSPAMPNA AIDLFGTNAL VQPQAPSSAT GPVIAGMGVT AGPIPEDFFQ NTIPSHQLAA QLPPPGIVLS
1301: RMAQPAPGMD QGRPVPNQMM ANVGLPDGGV PPQAPPQQSQ FPPQQSQFPP QQSQFPQQPG IPMDSIGLPD GGVPPQSQPL PSQGQALPSQ AQGFQPGIPA
1401: PSQPIDLSAL EGPGAAKQAA RPPAPTAVRP GQVPRGAPAA DCYKMALAHL EQNQLTDALS CLDEAFLALA KDQSREADIK AQATICAQYK IAVALLQEIA
1501: RLQRVQGAGA LSAKEEMARL SRHLASLPIQ AKHRINCIRT AIKRNMEVQN YAYAKQMLDL LYSKAPPTKQ DELKSLIDMC AQRGLTNKSI DPFEDPSQFC
1601: SVTLSRLSTI GHDVCDLCGA KFSALSAPGC VICGMGSIKR SDALAGGPGP VPSPFG
0101: SCDFATEQTL VLHSPEKKSE HVSIDTEVHL ALTPLEPIVF FGFHKRMSVT VVGTVDGGRP PTKIKTDLKK PIVNLACHPR LPVLYVAYAE GLIRAYNIQT
0201: YAVHYTLQLA VDSTIKLMGA GAFGFHPTLE WIFVGDRGGT LLAWDVSTER PSMIGITQAG SQPITSVSWL PTLRLLVTIS KDGALQVWKT RVIINPNRQP
0301: METHFFERAA IETMDITKIL TLQGGEAVYP LPRIKNLAVH PKFNLAAVIF VDMSGTEAAK NKAAYTREGR RQLFALLQGA RGSTAAVLKE KLLALGSSGI
0401: LAEHQLQAQL QEQHLKGQSQ LTISDVARKA FLHSHFMEGH AKSGPISRLP LVTISDSSDL LRDVPVCQPF HLELNFFNKE TRVVQYPVRA FYMDGFNLMA
0501: HNLASGADNL YKKLYSTIPS NVECHPKNMS YSPKQHLFLV VFELSGTAGV AHEVVLYWEQ TDLQTVNSKG SSIRGRDAAF LGPDDNQYAI LEEDRTSLSL
0601: FSLKAVATKE ALENNAAVLE ENTFADNAAN STERQGPLQF TFESEVDRIF SSPLESTLLY VISGKHIGLA KLLQGYRLST DNGLSITTKT DGKKFIKLKP
0701: NETVLQAHWQ TTLRGPVVGI LTNQRVLIAS ADLDILSSSS TKFDHGLPSY RSMLWVGPAL IFSSATAISM LGWDNKVRSI LSTSFPRSVL LGALNDRLLL
0801: VNPTDINPRQ KKGVEIRGCL VGLLEPLLIG FATMQQHFEQ KLDLSEVLYQ ITSRFDSLRI TPRSLDILTK GPPVCGDLAV SLSQAGPQFT QIMRCNYAIK
0901: ALRFSTALSI LKDEFLRSRD YPQCPPTSHL FQRFRELGYA CIKYGQFDSA KETFEVITDH ESMLDLFICH LNPSALRRLA QKLEESGTDS ELRRYLERIL
1001: RVRSTGWTQG VFANFAAESM VPKGPEWAGG NWEIKTPTNI KNIPQWELAG EVMPYMKTTD AGIPSVVADH IGVYLGVMKG RGNVVEVSEK SLVKAIAAAS
1101: SENAQAASSA SAEKNKAIAG GDSVGDTLAR QLGVQIASAD EQAKAAEEFK KTLYGVVDDG SSDEDESTSK TKKIHIRIRD KPAAPTVDVN KLKEATKQIG
1201: LGPPPLSRTR SLSGTPQDFN QAPTQPGGPA AAVSPAMPNA AIDLFGTNAL VQPQAPSSAT GPVIAGMGVT AGPIPEDFFQ NTIPSHQLAA QLPPPGIVLS
1301: RMAQPAPGMD QGRPVPNQMM ANVGLPDGGV PPQAPPQQSQ FPPQQSQFPP QQSQFPQQPG IPMDSIGLPD GGVPPQSQPL PSQGQALPSQ AQGFQPGIPA
1401: PSQPIDLSAL EGPGAAKQAA RPPAPTAVRP GQVPRGAPAA DCYKMALAHL EQNQLTDALS CLDEAFLALA KDQSREADIK AQATICAQYK IAVALLQEIA
1501: RLQRVQGAGA LSAKEEMARL SRHLASLPIQ AKHRINCIRT AIKRNMEVQN YAYAKQMLDL LYSKAPPTKQ DELKSLIDMC AQRGLTNKSI DPFEDPSQFC
1601: SVTLSRLSTI GHDVCDLCGA KFSALSAPGC VICGMGSIKR SDALAGGPGP VPSPFG
0001: MEWATVQHLD LRHVGRGVSK PLQPHTAAFH PSQAVIAVAV GSHIMEFDAL TGCKIASIDI GSPAVRMLYS PTSSNAVVAI LEDCTIRSCD FETEQTCVLH
0101: SPEKRSEHIS SDTEVHLAVT PLQPVVFFGF PKRMSVTVVG TVEGGRAPTK IKTDLKKPIV NIACHPRLPV LYVAYAEGLI RAYNIHTYAV HYTLQLDNTI
0201: KLIGASSFAF HPTLEWIFVG DRRGTLLAWD VSTERPNMIG ITQVGSQPIT SISWLPMLRV LVTVSKDGSL QVWKTRVIIN PNRPSTQTNF FEPAAMESID
0301: IPKILSQQGG EAVYPLPRIK TLEVHPKLNL AALIFANMVG NENTQNRAAQ TREGRKQLFA VLQSARGSSA SVLKEKLSSM GSSGILAEHQ LQALLQEHKG
0401: QSQLTISDIA RKAFLYSHFM EGHAKTAPIS RLPLITVVDT KDQLKDIPVC QPFHLELNFF NKPNRVLHYP VRSFYIEGLN LMAHNLCSGT DNIYKKLYTS
0501: IPGNVEYHSK HIVYSRKRHL FLVVFEFSGA TNEVVLYWEN TGSQLPNSKG STAKGCDAAF IGPNDDQFAI LDEDKTGLSM YILPKLTTME ENEKNLLSEE
0601: NQKKEADPSG IQGPQQFMFE TEVDRVFSTP IESTLMFACN GTQIGLAKLF QGYRLSASDG HYISTQGEGR KSIKLKKHEI ALQVQWQETP RGYVAGILTT
0701: QRVLMVSADF DILASSSTKY DRGLPSFRSL LWVGPALLFS TTTAVCLLGW DGKVRTILSI STPYAALVGA LNDRLLLAHP TDISPKQKKG IEIKSCLVGL
0801: LEPLLIGFST MQQTFEQKVD LSEILYQITT RFDSLRITPR SLDILARSAP VCGDLAVSLA QAGPQFNQVL RCAYAIKALR FSTALSVLKD EFLRSRDYPK
0901: CPPTSLLFQR FRQLGYACIK YGQFDSAKET FEVIGDYESM LDLFICHLNP SAMRRLAQKL EEESGDPELR RYCERILRVR STGWTQGIFA NFAAESMVPK
1001: GPEWGGGNWE IKTPTDMKSI PKWELAGEVM PYMKNEDGTI PSIVADHIGV YLGCVKGRVN VVEIKEDSLV SKPGGLSLLG KPVSDKPLAL PAGESSSMMG
1101: LESLGKQNVA DEQAKAAEEF KKTMYGATGD GSSSDEEGVT KPKKLQIRIR EKPTSTTVDV NKLKEAAKTF KLGDGLGLTM SRTKSINAGS QDLGQMLSQP
1201: SSSTVATTTA PSSASAPVDP FAMSSWTQQP QPVSQPAPPG VAAPIPEDFF QNTIPSVEVA KTLPPPGTYL SKMDQAARAA IAAQGGPNQA NNTPLPDIGL
1301: PDGGVPQQYP QQTSQQPGAP FQTVGLPDGG VRQQYPGQNQ VPSQVPVSTQ PLDLSVLGVP NTGDSGKPPG QPQSPPASVR PGQVPRGAAA PVCFKTGLAH
1401: LEQNQLPDAL SCFDEAFLAL AKDQSRGADI KAQATICAQY KIAVTLLREI LRLQRVQGAS ALSAKDEMAR LSRHLASLPL LAKHRINCIR TAIKRNMEVQ
1501: NYGYSKQMLE LLLSKAPASK QEELRGLVDL CVQRGTSNKS IDPLEDPSQL CSATLSRLST IGYDVCDLCG AKFAALSSPG CIICGMGSIK RSDALAGPAP
1601: VSTPFG
0101: SPEKRSEHIS SDTEVHLAVT PLQPVVFFGF PKRMSVTVVG TVEGGRAPTK IKTDLKKPIV NIACHPRLPV LYVAYAEGLI RAYNIHTYAV HYTLQLDNTI
0201: KLIGASSFAF HPTLEWIFVG DRRGTLLAWD VSTERPNMIG ITQVGSQPIT SISWLPMLRV LVTVSKDGSL QVWKTRVIIN PNRPSTQTNF FEPAAMESID
0301: IPKILSQQGG EAVYPLPRIK TLEVHPKLNL AALIFANMVG NENTQNRAAQ TREGRKQLFA VLQSARGSSA SVLKEKLSSM GSSGILAEHQ LQALLQEHKG
0401: QSQLTISDIA RKAFLYSHFM EGHAKTAPIS RLPLITVVDT KDQLKDIPVC QPFHLELNFF NKPNRVLHYP VRSFYIEGLN LMAHNLCSGT DNIYKKLYTS
0501: IPGNVEYHSK HIVYSRKRHL FLVVFEFSGA TNEVVLYWEN TGSQLPNSKG STAKGCDAAF IGPNDDQFAI LDEDKTGLSM YILPKLTTME ENEKNLLSEE
0601: NQKKEADPSG IQGPQQFMFE TEVDRVFSTP IESTLMFACN GTQIGLAKLF QGYRLSASDG HYISTQGEGR KSIKLKKHEI ALQVQWQETP RGYVAGILTT
0701: QRVLMVSADF DILASSSTKY DRGLPSFRSL LWVGPALLFS TTTAVCLLGW DGKVRTILSI STPYAALVGA LNDRLLLAHP TDISPKQKKG IEIKSCLVGL
0801: LEPLLIGFST MQQTFEQKVD LSEILYQITT RFDSLRITPR SLDILARSAP VCGDLAVSLA QAGPQFNQVL RCAYAIKALR FSTALSVLKD EFLRSRDYPK
0901: CPPTSLLFQR FRQLGYACIK YGQFDSAKET FEVIGDYESM LDLFICHLNP SAMRRLAQKL EEESGDPELR RYCERILRVR STGWTQGIFA NFAAESMVPK
1001: GPEWGGGNWE IKTPTDMKSI PKWELAGEVM PYMKNEDGTI PSIVADHIGV YLGCVKGRVN VVEIKEDSLV SKPGGLSLLG KPVSDKPLAL PAGESSSMMG
1101: LESLGKQNVA DEQAKAAEEF KKTMYGATGD GSSSDEEGVT KPKKLQIRIR EKPTSTTVDV NKLKEAAKTF KLGDGLGLTM SRTKSINAGS QDLGQMLSQP
1201: SSSTVATTTA PSSASAPVDP FAMSSWTQQP QPVSQPAPPG VAAPIPEDFF QNTIPSVEVA KTLPPPGTYL SKMDQAARAA IAAQGGPNQA NNTPLPDIGL
1301: PDGGVPQQYP QQTSQQPGAP FQTVGLPDGG VRQQYPGQNQ VPSQVPVSTQ PLDLSVLGVP NTGDSGKPPG QPQSPPASVR PGQVPRGAAA PVCFKTGLAH
1401: LEQNQLPDAL SCFDEAFLAL AKDQSRGADI KAQATICAQY KIAVTLLREI LRLQRVQGAS ALSAKDEMAR LSRHLASLPL LAKHRINCIR TAIKRNMEVQ
1501: NYGYSKQMLE LLLSKAPASK QEELRGLVDL CVQRGTSNKS IDPLEDPSQL CSATLSRLST IGYDVCDLCG AKFAALSSPG CIICGMGSIK RSDALAGPAP
1601: VSTPFG
Arabidopsis Description
Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J0P2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.