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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • mitochondrion 2
  • nucleus 1
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG38043 Sorghum cytosol 94.69 94.69
Os09t0408000-01 Rice cytosol, nucleus 26.15 89.09
TraesCS7D01G009600.1 Wheat golgi 86.05 87.32
TraesCS4A01G485300.1 Wheat cytosol 85.87 87.03
TraesCS7A01G009900.1 Wheat cytosol 84.42 86.94
Os09t0407950-01 Rice plasma membrane 51.03 85.1
HORVU5Hr1G067090.1 Barley cytosol 85.75 84.12
VIT_00s1373g00010.t01 Wine grape cytosol 7.61 80.77
KRH28498 Soybean cytosol 9.78 76.06
GSMUA_Achr10P... Banana cytosol 71.32 74.89
Solyc02g090570.2.1 Tomato nucleus 65.82 67.28
Bra036092.1-P Field mustard cytosol 62.44 66.45
KRH04644 Soybean endoplasmic reticulum 64.13 65.47
AT3G50590.1 Thale cress cytosol 63.59 65.24
KRH57890 Soybean endoplasmic reticulum 63.83 65.17
CDX77930 Canola cytosol 64.07 65.05
CDY17791 Canola cytosol 64.01 64.67
KRH76964 Soybean nucleus 63.22 64.55
VIT_00s0961g00020.t01 Wine grape cytosol, extracellular, plastid 7.61 51.64
VIT_00s0783g00010.t01 Wine grape cytosol 15.58 45.5
CDY26515 Canola cytosol, nucleus, plastid 6.22 40.71
Protein Annotations
Gene3D:2.130.10.10MapMan:22.1.4.4UniProt:A0A1D6KYA6InterPro:Coatomer_asu_Cncoils:CoilGO:GO:0003674
GO:GO:0005198GO:GO:0005488GO:GO:0005515GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005794GO:GO:0005886GO:GO:0006810GO:GO:0006886GO:GO:0008150
GO:GO:0016020GO:GO:0016192GO:GO:0030126InterPro:IPR001680InterPro:IPR015943InterPro:IPR017986
ProteinID:ONM07434.1PFAM:PF06957PFscan:PS50082PFscan:PS50294PANTHER:PTHR19878PANTHER:PTHR19878:SF4
SMART:SM00320SUPFAM:SSF50978SUPFAM:SSF69322UniParc:UPI000844DD27InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeat
InterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sfEnsemblPlantsGene:Zm00001d033368EnsemblPlants:Zm00001d033368_P007EnsemblPlants:Zm00001d033368_T007SEG:seg
Description
Transducin/WD40 repeat-like superfamily protein
Coordinates
chr1:+:260619748..260633089
Molecular Weight (calculated)
179919.0 Da
IEP (calculated)
7.674
GRAVY (calculated)
-0.124
Length
1656 amino acids
Sequence
(BLAST)
0001: MPEQSRSGAP MEWTTVQHLD LRHSGGRRGA SARPMQPHAA AFRSSQAIVA VAIGTHVVEF DALSGSKIAS IDLGARVVRM AYSPTTSHVV IAILEDATIR
0101: SCDFATEQTL VLHSPEKKTD HVSIDTEVHL ALTPLEPIVF FGFHKRMSVT VVGTVDGGRP PTKIKTDLKK PIVNLACHPR LPVLYVAYAE GLIRAYNIQT
0201: YAVHYTLQLA VDSTIKLIGA GAFGFHPTLE WIFVGDRGGT LLAWDVSTER PSMIGIHLSV YFPSEFCLSL LLSTQAGSHP ITSVSWLPTL RLLVTISKDG
0301: ALQVWKTRVI INPNRQPMET HFFERAAVET MDITKILTLQ GGEAVYPLPR IKNLAVHPKF NLAAVIFADM SGTEAAKNKA AYTREGRRQL FALLQGARGS
0401: TAAVLKEKLL ALGSSGILAE HQLQAQLQEQ HLKGYNFLLV SCHIDCCIDF TCFLIVSQSQ LTISDVARKA FLHSHFMEGH AQSGPIPRLP LVTISDSSNL
0501: LRDVPVCQPF HLELNFFNKE TRVVQYPVRA FYLDGFNLMA HNLSSGADNL YKKLYSTIPS NVECHPTNMS YSPKQHLFLV VFELSGTNGV VHEVVLYWEQ
0601: TDLQTVNSKG SSIRGRDAAF LGPDDNQYAI LEEDRTGLNL FSLKAVATKE ALENNAAVLE ENTFADNAAS ATSTERQGPL QFTFESEVDR IFSSPLESTL
0701: LYVISGKHIG LAKLLQGYRL SADNGLSITT KTDGKKFIKL KPNETVLQAH WQTTLRGPVV GILTNQRVLI ASADLDILSS SSTKFDRGLP SISFYLILLG
0801: ALNDRLLLVN PTDINPRQKK GVEIRACLVG LLEPLLIGFA TMQQHFEQKL DLSEVLYQIT SRFDSLRITP RSLDILTKGP PVCGDLAVSL SQAGPQFTQI
0901: MRCNYAIKAL RFSTALSILK DEFLRSRDYP QCPPTSHLFQ RFRELGYACI KYGQFDSAKE TFEVITDHES MLDLFICHLN PSALRRLAQK LEESATDSEL
1001: RRYLERILRV RSTGWTQGVF ANFAAESMVP KGPEWAGGNW EIKTPTNIKN IPQWELAGEV MPYMKTTDAG IPSVVADHIG VYLGVMKGRG NVVEVSEKSL
1101: VKAIAAASSE NTQPVSSASA EKSKAIPRGD SVGDTLARQL GVQIASSDEQ AKAAEDFKKT LYGVVDDGSS DEDESTSKTK KIHIRIRDKP AAPTVDVNKL
1201: KEATKQLGLG PPLSRTRSLS GTPQDFNQAP TQPGGPAAAV SPAMPNSAID LFGTNTLVQP QAPSSSTGPV IAGMGVTAGP IPEDFFQNTI PSHQLAAQLP
1301: PPGIVLSRMA QPAPGIEQGR PVPNQMMANV GLPDDGVPPQ APPQQSQFPP QQSQFPQQPG IPMDSIGLPD GGVPPQSQPL PSQGQFLPSQ AQGFQLGIPA
1401: PSQPIDLSAL EGPGAAKQAA RPPAPTAVRP GQVPRGAPAA ECYKMALAHL EQNQLTDALS CLDEAFLALA KDQSREADIK AQATICAQYK IAVALLQEIA
1501: RLQRVQGAGA LSAKEEMARL SRHLASLPIQ AKHRINCIRT AIKRNMEVQN YAYAKQMLDL LYSKAPPTKQ DELKSLIDMC VQRGLTNKSI DPFEDPSQFC
1601: SVTLSRLSTI GHDVCDLCGA KFSALSAPGC VICGMGSIKR SDALAGGPGP VPSPFG
Best Arabidopsis Sequence Match ( AT3G50590.1 )
(BLAST)
0001: MEWATVQHLD LRHVGRGVSK PLQPHTAAFH PSQAVIAVAV GSHIMEFDAL TGCKIASIDI GSPAVRMLYS PTSSNAVVAI LEDCTIRSCD FETEQTCVLH
0101: SPEKRSEHIS SDTEVHLAVT PLQPVVFFGF PKRMSVTVVG TVEGGRAPTK IKTDLKKPIV NIACHPRLPV LYVAYAEGLI RAYNIHTYAV HYTLQLDNTI
0201: KLIGASSFAF HPTLEWIFVG DRRGTLLAWD VSTERPNMIG ITQVGSQPIT SISWLPMLRV LVTVSKDGSL QVWKTRVIIN PNRPSTQTNF FEPAAMESID
0301: IPKILSQQGG EAVYPLPRIK TLEVHPKLNL AALIFANMVG NENTQNRAAQ TREGRKQLFA VLQSARGSSA SVLKEKLSSM GSSGILAEHQ LQALLQEHKG
0401: QSQLTISDIA RKAFLYSHFM EGHAKTAPIS RLPLITVVDT KDQLKDIPVC QPFHLELNFF NKPNRVLHYP VRSFYIEGLN LMAHNLCSGT DNIYKKLYTS
0501: IPGNVEYHSK HIVYSRKRHL FLVVFEFSGA TNEVVLYWEN TGSQLPNSKG STAKGCDAAF IGPNDDQFAI LDEDKTGLSM YILPKLTTME ENEKNLLSEE
0601: NQKKEADPSG IQGPQQFMFE TEVDRVFSTP IESTLMFACN GTQIGLAKLF QGYRLSASDG HYISTQGEGR KSIKLKKHEI ALQSFYSLPF NVVYIWPVLF
0701: EIKTIMFRKL TRHVQWQETP RGYVAGILTT QRVLMVSLLW VGPALLFSTT TAVCLLGWDG KVRTILSIST PYAALVGALN DRLLLAHPTD ISPKQKKGIE
0801: IKSCLVGLLE PLLIGFSTMQ QTFEQKVDLS EILYQITTRF DSLRITPRSL DILARSAPVC GDLAVSLAQA GPQFNQVLRC AYAIKALRFS TALSVLKDEF
0901: LRSRDYPKCP PTSLLFQRFR QLGYACIKYG QFDSAKETFE VIGDYESMLD LFICHLNPSA MRRLAQKLEE ESGDPELRRY CERILRVRST GWTQGIFANF
1001: AAESMVPKGP EWGGGNWEIK TPTDMKSIPK WELAGEVMPY MKNEDGTIPS IVADHIGVYL GCVKGRVNVV EIKEDSLVSK PGGLSLLGKP VSDKPLALPA
1101: GESSSMMGLE SLGKQNVADE QAKAAEEFKK TMYGATGDGS SSDEEGVTKP KKLQIRIREK PTSTTVDVNK LKEAAKTFKL GDGLGLTMSR TKSINAGSQD
1201: LGQMLSQPSS STVATTTAPS SASAPVDPFA MSSWTQQPQP VSQPAPPGVA APIPEDFFQN TIPSVEVAKT LPPPGTYLSK MDQAARAAIA AQGGPNQANN
1301: TPLPDIGLPD GGVPQQYPQQ TSQQPGAPFQ TVGLPDGGVR QQYPGQNQVP SQVPVSTQPL DLSVLGVPNT GDSGKPPGQP QSPPASVRPG QVPRGAAAPV
1401: CFKTGLAHLE QNQLPDALSC FDEAFLALAK DQSRGADIKA QATICAQYKI AVTLLREILR LQRVQGASAL SAKDEMARLS RHLASLPLLA KHRINCIRTA
1501: IKRNMEVQNY GYSKQMLELL LSKAPASKQE ELRGLVDLCV QRGTSNKSID PLEDPSQLCS ATLSRLSTIG YDVCDLCGAK FAALSSPGCI ICGMGSIKRS
1601: DALAGPAPVS TPFG
Arabidopsis Description
Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J0P2]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.