Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- endoplasmic reticulum 1
- cytosol 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG33009 | Sorghum | mitochondrion | 90.38 | 95.29 |
| Os01t0653800-02 | Rice | plasma membrane | 84.47 | 89.25 |
| TraesCS3B01G263200.1 | Wheat | golgi, unclear | 81.92 | 87.65 |
| TraesCS3A01G236500.2 | Wheat | mitochondrion | 81.65 | 87.61 |
| Zm00001d011483_P004 | Maize | mitochondrion | 88.32 | 85.72 |
| TraesCS3D01G237000.1 | Wheat | mitochondrion | 81.31 | 84.8 |
| HORVU3Hr1G058910.1 | Barley | plastid | 81.44 | 81.11 |
| GSMUA_Achr1P28020_001 | Banana | mitochondrion | 67.97 | 78.99 |
| KRG96637 | Soybean | endoplasmic reticulum | 60.48 | 77.88 |
| GSMUA_Achr6P21400_001 | Banana | mitochondrion | 69.97 | 77.0 |
| CDY19826 | Canola | mitochondrion | 63.16 | 74.17 |
| KRG89827 | Soybean | cytosol | 17.11 | 72.38 |
| KRG99486 | Soybean | endoplasmic reticulum | 15.26 | 71.38 |
| KRH68370 | Soybean | endoplasmic reticulum | 65.84 | 70.86 |
| AT5G24710.1 | Thale cress | mitochondrion | 65.64 | 69.35 |
| CDX87116 | Canola | mitochondrion | 64.67 | 68.44 |
| PGSC0003DMT400046936 | Potato | mitochondrion | 66.19 | 68.25 |
| Solyc01g102510.2.1 | Tomato | nucleus | 66.05 | 67.02 |
| VIT_05s0094g01650.t01 | Wine grape | cytosol | 3.3 | 66.67 |
| Bra028077.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, plastid | 5.43 | 46.2 |
Protein Annotations
| EntrezGene:100384414 | Gene3D:2.130.10.10 | MapMan:22.1.4.4 | UniProt:A0A1D6NH88 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | ProteinID:ONM39793.1 |
| ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | SMART:SM00320 | SUPFAM:SSF50978 | UniParc:UPI000844E626 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | EnsemblPlantsGene:Zm00001d044026 |
| EnsemblPlants:Zm00001d044026_P011 | EnsemblPlants:Zm00001d044026_T011 | SEG:seg | : | : | : |
Description
Transducin/WD40 repeat-like superfamily protein
Coordinates
chr3:+:217194744..217222055
Molecular Weight (calculated)
155452.0 Da
IEP (calculated)
6.963
GRAVY (calculated)
-0.039
Length
1455 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLRLRAFRPT SDKVVKIQLH PTHPWLVTAD ANDRVSVWDW EHRQVIYELK AGGVDERRLV GAKLEKLAEG DDSKGKPTEA IRGGSVKQVS FYDDDVRFWQ
0101: HWRNCSAAAE APTAVSQQSS TFIAPAPSTR GRHFVVICCE NKVIFLDLVT MRGRDVPKQE LDNRSLLCME FLSRTSSSDA PLVAFGSSDG VIRVLSMLTW
0201: KLVRRYTGGH KGAIACLMTY MSAAGEVHLV SGGSDGLLIL WSADHIHDSR ELVPKISMKA HDGGVVAVEL SRVMGSAPQL ITIGADKTLA IWDTVTFKEI
0301: RRIKPVPKLA CHSVASWCHP RAPNLDILTC VKDSHIWAIE HPTYSALTRP LCELSSLVPP QVLALHKKLR VYCMVAHPLQ PHLVATGTNI GIILSEFDPR
0401: ALPAIAPLPT PTGNKEHSAV YIVERELKLL NFQLSNTANP SLGNAGVASD AGRSMNNSIE QLIVKQTKKH ISTPAPHDSY SVLSVSSSGK YVAIVWPDIP
0501: SFAVYKANDW SVVDSGTGKL FAWDTCRDRY ALVESALAPR MPLVVKGGSS KKAKEAAAAA AQAAAAAASA ASAATVQVRI LLDDGTAHVL QRSIDGRNEP
0601: VSNLCFPFIV FSTNWSSIRI FSLLSVFWIS ELIFCRYPNI VSKTCCSEIK TLNFLSISIS SAAESLLSSV MAMIFQVIGL HGGALLGVTY RTSRRISPLT
0701: ATAISTVQSM PLSGFGGSGS SFASDDPFSS KEGPPQNFQL YSWETYQPVS GLLAQPEWTV WDQTVEYCAF AYQQYIVISS LRPQFRYLGD VSIPFATGAV
0801: WHRRQLFVST PTTIECVFVD AGVAAIDIET KRIKQEMKAR EAQSRAAEEH GDLALITVEA PQVTVSEKVS LRPPMLQVVR LASFQYAPSI PPFIVPKQSK
0901: FDGDDSVFQK ELDDRRYAEV AVAGGGVSVA VTRFPPEQKR PIGPLVVVGV RDGVLWLVDR YMCAHALSLS HPGIRCRCLA AYGDPVSAVK WATRLGREHH
1001: DDLAQFMLGM GYATEALHLP GISKRLEFDL AMQSNDLKRA LACLLTMSNS RDVGQETAAA DATDVTQILS LAVAKQAKQE SLTDAVQGIV KFVKEFFDLI
1101: DAADATGQSD IAREVLKRLA AAASVKGALH GQMLRGLALR LGNHGELTRL SGLVSNLITA GHGREAAFAA AVLGDNALME KAWQDTGMLA EAVLHAQAHG
1201: RPSLRNLVIT WNKMLQKELD HTPTVKTDAA AAFLASLEDP KLTSLGETEK KPPIEILPPG MPPLSAPPIV IKKAGAKPGL PNAAKASNGP IGAPMAQGAP
1301: MAHGTPGPQG VPMNQVTPSQ GSHDEARPSD ATVADAAAAV AEGTAAPPAA EGTSAPPAAE GTATPSSEEA KAAPGNEEGT SNPINEEATA AAVSVAAGSP
1401: DSAAAPAADT SSDAPAVNPT EDTVSAPSTE APPELTDKPS SAEASLPPPP SVSGV
0101: HWRNCSAAAE APTAVSQQSS TFIAPAPSTR GRHFVVICCE NKVIFLDLVT MRGRDVPKQE LDNRSLLCME FLSRTSSSDA PLVAFGSSDG VIRVLSMLTW
0201: KLVRRYTGGH KGAIACLMTY MSAAGEVHLV SGGSDGLLIL WSADHIHDSR ELVPKISMKA HDGGVVAVEL SRVMGSAPQL ITIGADKTLA IWDTVTFKEI
0301: RRIKPVPKLA CHSVASWCHP RAPNLDILTC VKDSHIWAIE HPTYSALTRP LCELSSLVPP QVLALHKKLR VYCMVAHPLQ PHLVATGTNI GIILSEFDPR
0401: ALPAIAPLPT PTGNKEHSAV YIVERELKLL NFQLSNTANP SLGNAGVASD AGRSMNNSIE QLIVKQTKKH ISTPAPHDSY SVLSVSSSGK YVAIVWPDIP
0501: SFAVYKANDW SVVDSGTGKL FAWDTCRDRY ALVESALAPR MPLVVKGGSS KKAKEAAAAA AQAAAAAASA ASAATVQVRI LLDDGTAHVL QRSIDGRNEP
0601: VSNLCFPFIV FSTNWSSIRI FSLLSVFWIS ELIFCRYPNI VSKTCCSEIK TLNFLSISIS SAAESLLSSV MAMIFQVIGL HGGALLGVTY RTSRRISPLT
0701: ATAISTVQSM PLSGFGGSGS SFASDDPFSS KEGPPQNFQL YSWETYQPVS GLLAQPEWTV WDQTVEYCAF AYQQYIVISS LRPQFRYLGD VSIPFATGAV
0801: WHRRQLFVST PTTIECVFVD AGVAAIDIET KRIKQEMKAR EAQSRAAEEH GDLALITVEA PQVTVSEKVS LRPPMLQVVR LASFQYAPSI PPFIVPKQSK
0901: FDGDDSVFQK ELDDRRYAEV AVAGGGVSVA VTRFPPEQKR PIGPLVVVGV RDGVLWLVDR YMCAHALSLS HPGIRCRCLA AYGDPVSAVK WATRLGREHH
1001: DDLAQFMLGM GYATEALHLP GISKRLEFDL AMQSNDLKRA LACLLTMSNS RDVGQETAAA DATDVTQILS LAVAKQAKQE SLTDAVQGIV KFVKEFFDLI
1101: DAADATGQSD IAREVLKRLA AAASVKGALH GQMLRGLALR LGNHGELTRL SGLVSNLITA GHGREAAFAA AVLGDNALME KAWQDTGMLA EAVLHAQAHG
1201: RPSLRNLVIT WNKMLQKELD HTPTVKTDAA AAFLASLEDP KLTSLGETEK KPPIEILPPG MPPLSAPPIV IKKAGAKPGL PNAAKASNGP IGAPMAQGAP
1301: MAHGTPGPQG VPMNQVTPSQ GSHDEARPSD ATVADAAAAV AEGTAAPPAA EGTSAPPAAE GTATPSSEEA KAAPGNEEGT SNPINEEATA AAVSVAAGSP
1401: DSAAAPAADT SSDAPAVNPT EDTVSAPSTE APPELTDKPS SAEASLPPPP SVSGV
0001: MLRARAFRQT NGKIVKIQVH PTHPWLVTAD DSDHVSVWNW EHRQVIYELK AGGVDERRLV GAKLEKLAEG ESDYKAKPTE AIRGGSVKQV KFYDDDVRYW
0101: QLWRNRSAAA ESPSAVNHLT SAFTSPAPST KGRHFLVICC ENKAIFLDLV TMRGRDVPKQ ELDNKSLLCM EFLSRSSGGD GPLVAFGSTD GVIRVLSMIT
0201: WKLARRYTGG HKGSIYCLMN FMASSGEALL VSGGSDGLLV LWSADHGADS RELVPKLSLK AHDGGVVAVE LSRVSGSAPQ LITIGADKTL AIWDTMTFKE
0301: LRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWSI EHPTYSALTR PLCELSSLVP PQVLATHRKL RVYCMVAHPL QPHLVATGTN VGIIVSEFDP
0401: RAIPSAAPLP ALPGSRENSA IYILGRELKL LNFQLSNTAN PSLGNNSALS ESGLSKGDPG EQLTVKQTKK QIVAPVPHDS YSVLSVSSSG KYVAVVWPDI
0501: LYFSIYKVSD WSIVDSGSAR LLAWDTCRDR FAILESVLPH RMPIIPKGGS SRKAKEAAAA AAQAAAAASA ASSASVQVRI LLDDGTSNIL MRSVGGRSEP
0601: VIGLHGGALL GIGYRTSRRI SPVAATAIST IQSMPLSGFG NSNVSSFSSY DDGFSSQKSA ESAPLNYQLY SWENFEPVGG MLPQPEWTAW DQTVEYCAFA
0701: YQQYMVISSL RPQYRYLGDV AIAHATGAVW HRRQLFVATP TTIECVFVDA GVSEIDIETR KMKEEMKLKE AQARAVAEHG ELALITVEGS QAAKQERISL
0801: RPPMLQVVRL ASFQNAPSVP PFLSLPRQSR GDSDDIMDER RVNEVAVGGG GVSVAVTRFP VEQKRPVGPL VVAGVRDGVL WLIDRYMCAH AISLNHPGIR
0901: CRCLAAYGDA VSAVKWASRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR LEFDLAMQSN DLKRALHCLL TMSNSKDIGQ DGVGLDLSDI LSLTATKKED
1001: VVEAVEGIVK FAKEFLDLID AADATGHADI AREALKRLAT AGSVKGALQG HELRGLSLRL ANHGELTRLS GLVNNLISIG LGRESAFSAA VLGDNALMEK
1101: AWQDTGMLAE AVLHAHAHGR PTLKNLVQAW NKTLQKEVEK APSSKTDAAS AFLASLEDPK LTSLSDASRK PPIEILPPGM SSIFASITAP KKPLLTQKTA
1201: QPEVAKPLAL EEPTKPLAIE APPSSEAPQT ESAPETAAAA ESPAPETAAV AESPAPGTAA VAEAPASETA AAPVDGPVTE TVSEPPPVEK EETSLEEKSD
1301: PSSTPNTETA TSTENTSQTT TTPESVTTAP PEPITTAPPE TVTTTAVKPT ENAATERRVT NYPPIRSQPI DFDFLNG
0101: QLWRNRSAAA ESPSAVNHLT SAFTSPAPST KGRHFLVICC ENKAIFLDLV TMRGRDVPKQ ELDNKSLLCM EFLSRSSGGD GPLVAFGSTD GVIRVLSMIT
0201: WKLARRYTGG HKGSIYCLMN FMASSGEALL VSGGSDGLLV LWSADHGADS RELVPKLSLK AHDGGVVAVE LSRVSGSAPQ LITIGADKTL AIWDTMTFKE
0301: LRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWSI EHPTYSALTR PLCELSSLVP PQVLATHRKL RVYCMVAHPL QPHLVATGTN VGIIVSEFDP
0401: RAIPSAAPLP ALPGSRENSA IYILGRELKL LNFQLSNTAN PSLGNNSALS ESGLSKGDPG EQLTVKQTKK QIVAPVPHDS YSVLSVSSSG KYVAVVWPDI
0501: LYFSIYKVSD WSIVDSGSAR LLAWDTCRDR FAILESVLPH RMPIIPKGGS SRKAKEAAAA AAQAAAAASA ASSASVQVRI LLDDGTSNIL MRSVGGRSEP
0601: VIGLHGGALL GIGYRTSRRI SPVAATAIST IQSMPLSGFG NSNVSSFSSY DDGFSSQKSA ESAPLNYQLY SWENFEPVGG MLPQPEWTAW DQTVEYCAFA
0701: YQQYMVISSL RPQYRYLGDV AIAHATGAVW HRRQLFVATP TTIECVFVDA GVSEIDIETR KMKEEMKLKE AQARAVAEHG ELALITVEGS QAAKQERISL
0801: RPPMLQVVRL ASFQNAPSVP PFLSLPRQSR GDSDDIMDER RVNEVAVGGG GVSVAVTRFP VEQKRPVGPL VVAGVRDGVL WLIDRYMCAH AISLNHPGIR
0901: CRCLAAYGDA VSAVKWASRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR LEFDLAMQSN DLKRALHCLL TMSNSKDIGQ DGVGLDLSDI LSLTATKKED
1001: VVEAVEGIVK FAKEFLDLID AADATGHADI AREALKRLAT AGSVKGALQG HELRGLSLRL ANHGELTRLS GLVNNLISIG LGRESAFSAA VLGDNALMEK
1101: AWQDTGMLAE AVLHAHAHGR PTLKNLVQAW NKTLQKEVEK APSSKTDAAS AFLASLEDPK LTSLSDASRK PPIEILPPGM SSIFASITAP KKPLLTQKTA
1201: QPEVAKPLAL EEPTKPLAIE APPSSEAPQT ESAPETAAAA ESPAPETAAV AESPAPGTAA VAEAPASETA AAPVDGPVTE TVSEPPPVEK EETSLEEKSD
1301: PSSTPNTETA TSTENTSQTT TTPESVTTAP PEPITTAPPE TVTTTAVKPT ENAATERRVT NYPPIRSQPI DFDFLNG
Arabidopsis Description
Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KIH8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.