Subcellular Localization
min:
: max
Winner_takes_all: golgi, unclear
Predictor Summary:
Predictor Summary:
- mitochondrion 5
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| golgi:
25769308
unclear: 25769308 |
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G236500.2 | Wheat | mitochondrion | 98.01 | 98.3 |
| TraesCS3D01G237000.1 | Wheat | mitochondrion | 97.13 | 94.7 |
| Os01t0653800-02 | Rice | plasma membrane | 90.59 | 89.47 |
| HORVU3Hr1G058910.1 | Barley | plastid | 94.49 | 87.95 |
| KXG33009 | Sorghum | mitochondrion | 89.04 | 87.75 |
| Zm00001d044026_P011 | Maize | mitochondrion | 87.65 | 81.92 |
| GSMUA_Achr1P28020_001 | Banana | mitochondrion | 73.01 | 79.31 |
| Zm00001d011483_P004 | Maize | mitochondrion | 86.91 | 78.85 |
| KRG96637 | Soybean | endoplasmic reticulum | 65.44 | 78.76 |
| GSMUA_Achr6P21400_001 | Banana | mitochondrion | 75.37 | 77.53 |
| CDY19826 | Canola | mitochondrion | 66.99 | 73.53 |
| KRG89827 | Soybean | cytosol | 18.24 | 72.09 |
| KRH68370 | Soybean | endoplasmic reticulum | 71.47 | 71.89 |
| KRG99486 | Soybean | endoplasmic reticulum | 16.32 | 71.38 |
| AT5G24710.1 | Thale cress | mitochondrion | 69.93 | 69.06 |
| PGSC0003DMT400046936 | Potato | mitochondrion | 70.81 | 68.25 |
| CDX87116 | Canola | mitochondrion | 68.68 | 67.93 |
| Solyc01g102510.2.1 | Tomato | nucleus | 70.44 | 66.81 |
| VIT_05s0094g01650.t01 | Wine grape | cytosol | 3.53 | 66.67 |
| Bra028077.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, plastid | 5.74 | 45.61 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G263200.1 | EnsemblPlantsGene:TraesCS3B01G263200 | Gene3D:2.130.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | PANTHER:PTHR45521 | PFscan:PS50082 | PFscan:PS50294 | ScanProsite:PS00678 |
| SEG:seg | SMART:SM00320 | SUPFAM:SSF50978 | MapMan:22.1.4.4 | : | : |
Description
No Description!
Coordinates
chr3B:+:421902304..421918298
Molecular Weight (calculated)
145314.0 Da
IEP (calculated)
7.291
GRAVY (calculated)
-0.131
Length
1360 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLRLRAFRPT SDKVVKIQLH PTHPWLVTAD ANDRVSVWDW EHRQVVYELK AGGVDERRLV GVKLEKLAEG ETDSKGKPTE AIRGGSVKQV SFYDDDVRFW
0101: QHWRNCSAAS EAPTAVNQQS SAFSAPAPST RGRHFVVICC ENKAIFLDLV TMRGRDVPKQ ELDNKSLLCM EFLSRSSSSD APLVAFGASD GVIRVLSMMT
0201: WKLVRRYTGG HKGAISCLMT FMSAAGEVHL VSGGSDGLLV LWSADHIHDS RELVPKISLK AHDGGVVAVE LSRVMGSAPQ LITIGADKTL AIWDTVTFKE
0301: IRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWAI EHPTYSALTR PLCELSSLVP PQALAQHKKL RVYCMVAHPL QPHLVATGTN IGIILSEFDP
0401: RALPAVAPLP ALTESKEHSA VYIVERELKL LNFQFSNTAN PSLGSASETG RSRNESIDQL IVKQSKKHIS TPAPHDSYSI LSASSSGKYV AVVWPDIPSF
0501: VVYKASDWSV VDSGTGKLFA WDSCRDRYAL VESALAPRMP LIVKGGSSKK AKEAAAAAAQ AAAAAASAAS SATVQVRILL DDGTAHVLQR SIDGRSEPVV
0601: GLHGGALLGV TYRTSRRISP LTATAISTVQ SMPLSGFGGS GSSFASDDPF SSREGPPQNF QLYSWETYQP VSGLLAQPEW TVWDQTVEYC AFAYQQYIVI
0701: SSLRPQFRYL GDVSIPSATG AVWHRRQLFV ATPTTIECVF VDAGVAAIDI ETKKRKEEMK AREAQGRAVA DHGDLALITV EGPQVTASEK ISLRPPMLQV
0801: VRLASFQHAP SIPPFIVPKQ SKLNGDDSVF LKELDDRRYS EVAVAGGGVS VAVTRFPPEQ KRPIGPLVLV GVRDGVLWLV DRYMCAHALS LSHPGIRCRC
0901: LAAYGDPVSA VKWATRLGRE HHDDLAQFML GMGYATEALH LPGISKRLEF DLAMQSKDLK RALACLLTMS NSRDVGQETT ATDVTQILNL AVAKQAKQES
1001: LADAVQGIVK FVKEFFDLID AADATGQAEI AREVLKRLAA AASVKGALHG QTLRGLALRL ANHGELTRLS GLVSNLITAG HGREAAFAAA VLGDNALMEK
1101: AWQDTGMLAE AVLHAQAHGR PSLRSSVITW NKMLQKELDH TPTVKTDAAA AFLASLEDPK LTSLGETEKK PPIEILPPGM PPLSAPPIII KKAAAKPGLP
1201: NAAQTPNAGA PMNQGTPMAQ GTPMNQSTPM AQGTPVAQGA PMAQAPPAPA QSTDEVKPSE ATTAPDNVEA TAATSNAEAT AAPGTGEATE APVPDPTNSS
1301: PDAAAAPAPA PAADSSGTDA LAVTPSDSTN DAPSSKEPET QDKPPSTEVS PSPTPSISAV
0101: QHWRNCSAAS EAPTAVNQQS SAFSAPAPST RGRHFVVICC ENKAIFLDLV TMRGRDVPKQ ELDNKSLLCM EFLSRSSSSD APLVAFGASD GVIRVLSMMT
0201: WKLVRRYTGG HKGAISCLMT FMSAAGEVHL VSGGSDGLLV LWSADHIHDS RELVPKISLK AHDGGVVAVE LSRVMGSAPQ LITIGADKTL AIWDTVTFKE
0301: IRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWAI EHPTYSALTR PLCELSSLVP PQALAQHKKL RVYCMVAHPL QPHLVATGTN IGIILSEFDP
0401: RALPAVAPLP ALTESKEHSA VYIVERELKL LNFQFSNTAN PSLGSASETG RSRNESIDQL IVKQSKKHIS TPAPHDSYSI LSASSSGKYV AVVWPDIPSF
0501: VVYKASDWSV VDSGTGKLFA WDSCRDRYAL VESALAPRMP LIVKGGSSKK AKEAAAAAAQ AAAAAASAAS SATVQVRILL DDGTAHVLQR SIDGRSEPVV
0601: GLHGGALLGV TYRTSRRISP LTATAISTVQ SMPLSGFGGS GSSFASDDPF SSREGPPQNF QLYSWETYQP VSGLLAQPEW TVWDQTVEYC AFAYQQYIVI
0701: SSLRPQFRYL GDVSIPSATG AVWHRRQLFV ATPTTIECVF VDAGVAAIDI ETKKRKEEMK AREAQGRAVA DHGDLALITV EGPQVTASEK ISLRPPMLQV
0801: VRLASFQHAP SIPPFIVPKQ SKLNGDDSVF LKELDDRRYS EVAVAGGGVS VAVTRFPPEQ KRPIGPLVLV GVRDGVLWLV DRYMCAHALS LSHPGIRCRC
0901: LAAYGDPVSA VKWATRLGRE HHDDLAQFML GMGYATEALH LPGISKRLEF DLAMQSKDLK RALACLLTMS NSRDVGQETT ATDVTQILNL AVAKQAKQES
1001: LADAVQGIVK FVKEFFDLID AADATGQAEI AREVLKRLAA AASVKGALHG QTLRGLALRL ANHGELTRLS GLVSNLITAG HGREAAFAAA VLGDNALMEK
1101: AWQDTGMLAE AVLHAQAHGR PSLRSSVITW NKMLQKELDH TPTVKTDAAA AFLASLEDPK LTSLGETEKK PPIEILPPGM PPLSAPPIII KKAAAKPGLP
1201: NAAQTPNAGA PMNQGTPMAQ GTPMNQSTPM AQGTPVAQGA PMAQAPPAPA QSTDEVKPSE ATTAPDNVEA TAATSNAEAT AAPGTGEATE APVPDPTNSS
1301: PDAAAAPAPA PAADSSGTDA LAVTPSDSTN DAPSSKEPET QDKPPSTEVS PSPTPSISAV
0001: MLRARAFRQT NGKIVKIQVH PTHPWLVTAD DSDHVSVWNW EHRQVIYELK AGGVDERRLV GAKLEKLAEG ESDYKAKPTE AIRGGSVKQV KFYDDDVRYW
0101: QLWRNRSAAA ESPSAVNHLT SAFTSPAPST KGRHFLVICC ENKAIFLDLV TMRGRDVPKQ ELDNKSLLCM EFLSRSSGGD GPLVAFGSTD GVIRVLSMIT
0201: WKLARRYTGG HKGSIYCLMN FMASSGEALL VSGGSDGLLV LWSADHGADS RELVPKLSLK AHDGGVVAVE LSRVSGSAPQ LITIGADKTL AIWDTMTFKE
0301: LRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWSI EHPTYSALTR PLCELSSLVP PQVLATHRKL RVYCMVAHPL QPHLVATGTN VGIIVSEFDP
0401: RAIPSAAPLP ALPGSRENSA IYILGRELKL LNFQLSNTAN PSLGNNSALS ESGLSKGDPG EQLTVKQTKK QIVAPVPHDS YSVLSVSSSG KYVAVVWPDI
0501: LYFSIYKVSD WSIVDSGSAR LLAWDTCRDR FAILESVLPH RMPIIPKGGS SRKAKEAAAA AAQAAAAASA ASSASVQVRI LLDDGTSNIL MRSVGGRSEP
0601: VIGLHGGALL GIGYRTSRRI SPVAATAIST IQSMPLSGFG NSNVSSFSSY DDGFSSQKSA ESAPLNYQLY SWENFEPVGG MLPQPEWTAW DQTVEYCAFA
0701: YQQYMVISSL RPQYRYLGDV AIAHATGAVW HRRQLFVATP TTIECVFVDA GVSEIDIETR KMKEEMKLKE AQARAVAEHG ELALITVEGS QAAKQERISL
0801: RPPMLQVVRL ASFQNAPSVP PFLSLPRQSR GDSDDIMDER RVNEVAVGGG GVSVAVTRFP VEQKRPVGPL VVAGVRDGVL WLIDRYMCAH AISLNHPGIR
0901: CRCLAAYGDA VSAVKWASRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR LEFDLAMQSN DLKRALHCLL TMSNSKDIGQ DGVGLDLSDI LSLTATKKED
1001: VVEAVEGIVK FAKEFLDLID AADATGHADI AREALKRLAT AGSVKGALQG HELRGLSLRL ANHGELTRLS GLVNNLISIG LGRESAFSAA VLGDNALMEK
1101: AWQDTGMLAE AVLHAHAHGR PTLKNLVQAW NKTLQKEVEK APSSKTDAAS AFLASLEDPK LTSLSDASRK PPIEILPPGM SSIFASITAP KKPLLTQKTA
1201: QPEVAKPLAL EEPTKPLAIE APPSSEAPQT ESAPETAAAA ESPAPETAAV AESPAPGTAA VAEAPASETA AAPVDGPVTE TVSEPPPVEK EETSLEEKSD
1301: PSSTPNTETA TSTENTSQTT TTPESVTTAP PEPITTAPPE TVTTTAVKPT ENAATERRVT NYPPIRSQPI DFDFLNG
0101: QLWRNRSAAA ESPSAVNHLT SAFTSPAPST KGRHFLVICC ENKAIFLDLV TMRGRDVPKQ ELDNKSLLCM EFLSRSSGGD GPLVAFGSTD GVIRVLSMIT
0201: WKLARRYTGG HKGSIYCLMN FMASSGEALL VSGGSDGLLV LWSADHGADS RELVPKLSLK AHDGGVVAVE LSRVSGSAPQ LITIGADKTL AIWDTMTFKE
0301: LRRIKPVPKL ACHSVASWCH PRAPNLDILT CVKDSHIWSI EHPTYSALTR PLCELSSLVP PQVLATHRKL RVYCMVAHPL QPHLVATGTN VGIIVSEFDP
0401: RAIPSAAPLP ALPGSRENSA IYILGRELKL LNFQLSNTAN PSLGNNSALS ESGLSKGDPG EQLTVKQTKK QIVAPVPHDS YSVLSVSSSG KYVAVVWPDI
0501: LYFSIYKVSD WSIVDSGSAR LLAWDTCRDR FAILESVLPH RMPIIPKGGS SRKAKEAAAA AAQAAAAASA ASSASVQVRI LLDDGTSNIL MRSVGGRSEP
0601: VIGLHGGALL GIGYRTSRRI SPVAATAIST IQSMPLSGFG NSNVSSFSSY DDGFSSQKSA ESAPLNYQLY SWENFEPVGG MLPQPEWTAW DQTVEYCAFA
0701: YQQYMVISSL RPQYRYLGDV AIAHATGAVW HRRQLFVATP TTIECVFVDA GVSEIDIETR KMKEEMKLKE AQARAVAEHG ELALITVEGS QAAKQERISL
0801: RPPMLQVVRL ASFQNAPSVP PFLSLPRQSR GDSDDIMDER RVNEVAVGGG GVSVAVTRFP VEQKRPVGPL VVAGVRDGVL WLIDRYMCAH AISLNHPGIR
0901: CRCLAAYGDA VSAVKWASRL GREHHDDLAQ FMLGMGYATE ALHLPGISKR LEFDLAMQSN DLKRALHCLL TMSNSKDIGQ DGVGLDLSDI LSLTATKKED
1001: VVEAVEGIVK FAKEFLDLID AADATGHADI AREALKRLAT AGSVKGALQG HELRGLSLRL ANHGELTRLS GLVNNLISIG LGRESAFSAA VLGDNALMEK
1101: AWQDTGMLAE AVLHAHAHGR PTLKNLVQAW NKTLQKEVEK APSSKTDAAS AFLASLEDPK LTSLSDASRK PPIEILPPGM SSIFASITAP KKPLLTQKTA
1201: QPEVAKPLAL EEPTKPLAIE APPSSEAPQT ESAPETAAAA ESPAPETAAV AESPAPGTAA VAEAPASETA AAPVDGPVTE TVSEPPPVEK EETSLEEKSD
1301: PSSTPNTETA TSTENTSQTT TTPESVTTAP PEPITTAPPE TVTTTAVKPT ENAATERRVT NYPPIRSQPI DFDFLNG
Arabidopsis Description
Transducin/WD40 repeat-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KIH8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.