Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G003600.1 | Wheat | plastid | 97.01 | 97.62 |
| TraesCS2D01G014900.1 | Wheat | plastid | 97.8 | 97.49 |
| HORVU2Hr1G002480.5 | Barley | cytosol | 63.94 | 95.08 |
| Os08t0243900-01 | Rice | plasma membrane, plastid | 88.98 | 88.14 |
| EES14778 | Sorghum | plastid | 87.87 | 87.6 |
| HORVU2Hr1G002410.2 | Barley | plastid | 94.96 | 87.52 |
| Zm00001d024416_P001 | Maize | plasma membrane | 87.72 | 87.44 |
| GSMUA_Achr3P27960_001 | Banana | plastid | 67.56 | 65.5 |
| VIT_11s0052g00920.t01 | Wine grape | mitochondrion | 56.38 | 57.65 |
| KRG90331 | Soybean | endoplasmic reticulum | 56.22 | 56.67 |
| KRH02873 | Soybean | endoplasmic reticulum, nucleus | 55.28 | 55.71 |
| PGSC0003DMT400029685 | Potato | cytosol, plastid | 54.8 | 54.8 |
| Solyc10g078790.1.1 | Tomato | nucleus | 54.49 | 54.49 |
| CDX88623 | Canola | plastid | 54.33 | 53.82 |
| CDY11868 | Canola | plastid | 54.49 | 53.81 |
| AT5G57460.1 | Thale cress | cytosol | 54.65 | 53.72 |
| Bra006819.1-P | Field mustard | plastid | 54.33 | 53.65 |
| Bra002727.1-P | Field mustard | plastid | 53.86 | 53.44 |
| CDY38299 | Canola | plastid | 53.7 | 53.03 |
| CDY25907 | Canola | plastid | 53.23 | 52.4 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G014200.1 | EnsemblPlantsGene:TraesCS2A01G014200 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005886 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0016020 | InterPro:AP2_Mu_C_sf | InterPro:IPR028565 |
| InterPro:MHD | InterPro:Muniscin_C | PANTHER:PTHR37769 | PFAM:PF10291 | PFscan:PS51072 | SEG:seg |
| SUPFAM:SSF49447 | MapMan:22.1.4.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:5676113..5678020
Molecular Weight (calculated)
67400.5 Da
IEP (calculated)
6.017
GRAVY (calculated)
-0.034
Length
635 amino acids
Sequence
(BLAST)
(BLAST)
001: MACLAISLQP VNGPDILLQT RSWFPVSRAL AAVSAFRLAR LSLARGKQHP SSSSSASLDA IGDDPLATGS GQLVVGVESQ YRVVYRLVNS IYVLGVTTAS
101: DHAAPAVHAF AVADAVNQAV SVLVAACRGV DATPEKVHRK YPEVYLALDL VLHGVGSVRL SQILATIHGD NLARMVNSSP DAEARARGAD SWPVVEHLAQ
201: DRHAARDGFA TASFELPQET LSAGDEFSAS SLAPATAAAT GDEPPPEEAP PVEKDPFAAS DMVASKPEEA LVGAFKKNKE TALVVADPAA ALAGLEVTTL
301: PPAEATKPTF IGVEGFEGDY GGIEFGNEEA SLAEAFEGFN APFGGGLDAS EFVTTTKKDH KDKTLTGLEI LAMSGGQAPN APSGSPLDSL VTPSKEMTVP
401: ELCIVEEINA EFNESVLARV GLKGTIILQT LPPKKAAGRE AEFSFRLEGT SGMKRAALQS TVLSSLENGL FHVKTPSKEE PIPIMKYSFL PKHSPLPLRL
501: RLVKRHSGTL LSLMIHYASN PMLPRPLSNV TFIVKLPVDP TLLNVSPKAV LNRAERELRW HISDIPLKGP AGRLRARMPV DQDSKDGELE VVGMVKFAYQ
601: GPFTLSGIKL CPAINSTAQF NEVGHTFSSG SYRCI
101: DHAAPAVHAF AVADAVNQAV SVLVAACRGV DATPEKVHRK YPEVYLALDL VLHGVGSVRL SQILATIHGD NLARMVNSSP DAEARARGAD SWPVVEHLAQ
201: DRHAARDGFA TASFELPQET LSAGDEFSAS SLAPATAAAT GDEPPPEEAP PVEKDPFAAS DMVASKPEEA LVGAFKKNKE TALVVADPAA ALAGLEVTTL
301: PPAEATKPTF IGVEGFEGDY GGIEFGNEEA SLAEAFEGFN APFGGGLDAS EFVTTTKKDH KDKTLTGLEI LAMSGGQAPN APSGSPLDSL VTPSKEMTVP
401: ELCIVEEINA EFNESVLARV GLKGTIILQT LPPKKAAGRE AEFSFRLEGT SGMKRAALQS TVLSSLENGL FHVKTPSKEE PIPIMKYSFL PKHSPLPLRL
501: RLVKRHSGTL LSLMIHYASN PMLPRPLSNV TFIVKLPVDP TLLNVSPKAV LNRAERELRW HISDIPLKGP AGRLRARMPV DQDSKDGELE VVGMVKFAYQ
601: GPFTLSGIKL CPAINSTAQF NEVGHTFSSG SYRCI
001: MSCLALALQP ANGSDILLQT REWFPPARAL IALSYFRQMR QALASSKQQH QQQSNQKQNQ ASSSSSSSSS VADPDDATAA EFVGDDPLAA SNGQVIVGVE
101: SKYRVVYRLV NSIYILGVTV ADHDNSINVF ECIHIVNQAV SVIVTACRGV EVTPEKLGRK YAEVYMALDI VLRGVSNIRL AAMLGAMHGD GIAKMVHSAL
201: DTENKIRGAD SWMAVESHAA EHQASVNAFS NARFELPPET VAAGDEFAAS LAPVVPESEQ LKEEPEPENK DPFAASETIN KEKELVGGFK KTKDPSSTDL
301: TLALAGLEVT TLPPAEATQS THINVEGFEG QYGGIEFSNE QATIGETFES FSDAWGGGLD PSEFMGPKKI QKKEGLGGLE LLHTSDPKAV EGKDGVNIDN
401: LVKKPEMKGP EMYISEEIRT EFRESLLARV GVMGVIYLKT MPPKGSGEEK ETEFSFRVEG TTAVKRFAMQ SSRISSLGNG LFHVRTAPSE EPIPILKYSL
501: QPKLTPLPLR VRMVKRISGT LLSLMIQYVS NPDLPQPLKN VDFILKLPVD PTLLKVSPKA ILNRTDRELK WQIPEIPLNG SPGRLRARMP IDSDNSEEEP
601: DIICYVKFSV QGNTSLSGIS LRAAAEGNTD FFEVDHRYET GVYMCN
101: SKYRVVYRLV NSIYILGVTV ADHDNSINVF ECIHIVNQAV SVIVTACRGV EVTPEKLGRK YAEVYMALDI VLRGVSNIRL AAMLGAMHGD GIAKMVHSAL
201: DTENKIRGAD SWMAVESHAA EHQASVNAFS NARFELPPET VAAGDEFAAS LAPVVPESEQ LKEEPEPENK DPFAASETIN KEKELVGGFK KTKDPSSTDL
301: TLALAGLEVT TLPPAEATQS THINVEGFEG QYGGIEFSNE QATIGETFES FSDAWGGGLD PSEFMGPKKI QKKEGLGGLE LLHTSDPKAV EGKDGVNIDN
401: LVKKPEMKGP EMYISEEIRT EFRESLLARV GVMGVIYLKT MPPKGSGEEK ETEFSFRVEG TTAVKRFAMQ SSRISSLGNG LFHVRTAPSE EPIPILKYSL
501: QPKLTPLPLR VRMVKRISGT LLSLMIQYVS NPDLPQPLKN VDFILKLPVD PTLLKVSPKA ILNRTDRELK WQIPEIPLNG SPGRLRARMP IDSDNSEEEP
601: DIICYVKFSV QGNTSLSGIS LRAAAEGNTD FFEVDHRYET GVYMCN
Arabidopsis Description
At5g57460 [Source:UniProtKB/TrEMBL;Acc:Q9FKM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.