Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 1
- mitochondrion 1
- cytosol 1
- plasma membrane 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES14778 | Sorghum | plastid | 68.4 | 70.33 |
| Zm00001d024416_P001 | Maize | plasma membrane | 67.94 | 69.86 |
| Os08t0243900-01 | Rice | plasma membrane, plastid | 66.41 | 67.86 |
| TraesCS2B01G003600.1 | Wheat | plastid | 65.34 | 67.83 |
| HORVU2Hr1G002480.5 | Barley | cytosol | 44.12 | 67.68 |
| TraesCS2A01G014200.1 | Wheat | plastid | 65.5 | 67.56 |
| TraesCS2D01G014900.1 | Wheat | plastid | 65.19 | 67.03 |
| KRG90331 | Soybean | endoplasmic reticulum | 61.37 | 63.81 |
| KRH02873 | Soybean | endoplasmic reticulum, nucleus | 61.07 | 63.49 |
| VIT_11s0052g00920.t01 | Wine grape | mitochondrion | 60.15 | 63.45 |
| HORVU2Hr1G002410.2 | Barley | plastid | 65.04 | 61.83 |
| Solyc10g078790.1.1 | Tomato | nucleus | 58.63 | 60.47 |
| PGSC0003DMT400029685 | Potato | cytosol, plastid | 58.47 | 60.31 |
| Bra002727.1-P | Field mustard | plastid | 58.32 | 59.69 |
| AT5G57460.1 | Thale cress | cytosol | 58.47 | 59.29 |
| CDY38299 | Canola | plastid | 58.17 | 59.25 |
| CDX88623 | Canola | plastid | 57.86 | 59.13 |
| CDY11868 | Canola | plastid | 57.86 | 58.94 |
| Bra006819.1-P | Field mustard | plastid | 57.86 | 58.94 |
| CDY25907 | Canola | plastid | 57.86 | 58.76 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P27960_001 | EnsemblPlants:GSMUA_Achr3T27960_001 | EnsemblPlantsGene:GSMUA_Achr3G27960_001 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005886 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0016020 | InterPro:IPR028565 |
| InterPro:MHD | InterPro:Muniscin_C | PANTHER:PTHR37769 | PFAM:PF10291 | PFscan:PS51072 | SEG:seg |
| UniParc:UPI000294D4CD | UniProt:M0SIG2 | MapMan:22.1.4.2 | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G27960_001]
Coordinates
chr3:-:27379816..27382015
Molecular Weight (calculated)
69598.9 Da
IEP (calculated)
5.148
GRAVY (calculated)
-0.093
Length
655 amino acids
Sequence
(BLAST)
(BLAST)
001: MACLALSLQP ANGPDILLQT REWFPPARAL AALSAFRHTR LSLSPAAAGP ARGLPSSSSA VPASSPSPSS DDLDSSLGDD PLAASGGQLV VGVESKYRVV
101: YRLVNSVYVL GVTTADHHSN LFECINTVNQ AVSVVVAACR GVDVTPEKLH RKYPEVYMAL DIVLRGVGSV RLAYILSSIH GDNIAKMVHT AIDAENRVRG
201: ADSWAGGAEA LATERRANLE AFSSAFFELP TETLAAGDEV AVSIAPATTS LTEDQQQKDQ TEEAAPEEKD PFAASERINK PDEALVGGFK KSKDQTASTA
301: DPTLALAGLE VTTLPPAEAT KPTFIGVEGF EGDYGGIEFG NEEASLSEAF EGIEGNTPFG GGLDASEFIT TTKKTTQAQG LTGLELLATG PSPAAATAAA
401: AAGAGTPLEN LLVTKTKEMT GPEMFISEEI NAEFRESLLA RVGLKGTIFL RTLPPKKAAG KETEFSFRLE GTSSIKRAVL QSSRVSSLQN GLFHVRTPSM
501: EDPIPLILYS LQPRLTPLPL RLRLVKRHTG KLLRAMIQYV SNPSLPMPLT NVTFILKLPV EPTLLEVSPK AIRGEKEIRW HISDVPLKGP PGRLRAKMPV
601: DQDSADGELD VNGMVNFSSQ GSMTLSGVCL RPVSDGIAHF NEVSHIYASG TYLCT
101: YRLVNSVYVL GVTTADHHSN LFECINTVNQ AVSVVVAACR GVDVTPEKLH RKYPEVYMAL DIVLRGVGSV RLAYILSSIH GDNIAKMVHT AIDAENRVRG
201: ADSWAGGAEA LATERRANLE AFSSAFFELP TETLAAGDEV AVSIAPATTS LTEDQQQKDQ TEEAAPEEKD PFAASERINK PDEALVGGFK KSKDQTASTA
301: DPTLALAGLE VTTLPPAEAT KPTFIGVEGF EGDYGGIEFG NEEASLSEAF EGIEGNTPFG GGLDASEFIT TTKKTTQAQG LTGLELLATG PSPAAATAAA
401: AAGAGTPLEN LLVTKTKEMT GPEMFISEEI NAEFRESLLA RVGLKGTIFL RTLPPKKAAG KETEFSFRLE GTSSIKRAVL QSSRVSSLQN GLFHVRTPSM
501: EDPIPLILYS LQPRLTPLPL RLRLVKRHTG KLLRAMIQYV SNPSLPMPLT NVTFILKLPV EPTLLEVSPK AIRGEKEIRW HISDVPLKGP PGRLRAKMPV
601: DQDSADGELD VNGMVNFSSQ GSMTLSGVCL RPVSDGIAHF NEVSHIYASG TYLCT
001: MSCLALALQP ANGSDILLQT REWFPPARAL IALSYFRQMR QALASSKQQH QQQSNQKQNQ ASSSSSSSSS VADPDDATAA EFVGDDPLAA SNGQVIVGVE
101: SKYRVVYRLV NSIYILGVTV ADHDNSINVF ECIHIVNQAV SVIVTACRGV EVTPEKLGRK YAEVYMALDI VLRGVSNIRL AAMLGAMHGD GIAKMVHSAL
201: DTENKIRGAD SWMAVESHAA EHQASVNAFS NARFELPPET VAAGDEFAAS LAPVVPESEQ LKEEPEPENK DPFAASETIN KEKELVGGFK KTKDPSSTDL
301: TLALAGLEVT TLPPAEATQS THINVEGFEG QYGGIEFSNE QATIGETFES FSDAWGGGLD PSEFMGPKKI QKKEGLGGLE LLHTSDPKAV EGKDGVNIDN
401: LVKKPEMKGP EMYISEEIRT EFRESLLARV GVMGVIYLKT MPPKGSGEEK ETEFSFRVEG TTAVKRFAMQ SSRISSLGNG LFHVRTAPSE EPIPILKYSL
501: QPKLTPLPLR VRMVKRISGT LLSLMIQYVS NPDLPQPLKN VDFILKLPVD PTLLKVSPKA ILNRTDRELK WQIPEIPLNG SPGRLRARMP IDSDNSEEEP
601: DIICYVKFSV QGNTSLSGIS LRAAAEGNTD FFEVDHRYET GVYMCN
101: SKYRVVYRLV NSIYILGVTV ADHDNSINVF ECIHIVNQAV SVIVTACRGV EVTPEKLGRK YAEVYMALDI VLRGVSNIRL AAMLGAMHGD GIAKMVHSAL
201: DTENKIRGAD SWMAVESHAA EHQASVNAFS NARFELPPET VAAGDEFAAS LAPVVPESEQ LKEEPEPENK DPFAASETIN KEKELVGGFK KTKDPSSTDL
301: TLALAGLEVT TLPPAEATQS THINVEGFEG QYGGIEFSNE QATIGETFES FSDAWGGGLD PSEFMGPKKI QKKEGLGGLE LLHTSDPKAV EGKDGVNIDN
401: LVKKPEMKGP EMYISEEIRT EFRESLLARV GVMGVIYLKT MPPKGSGEEK ETEFSFRVEG TTAVKRFAMQ SSRISSLGNG LFHVRTAPSE EPIPILKYSL
501: QPKLTPLPLR VRMVKRISGT LLSLMIQYVS NPDLPQPLKN VDFILKLPVD PTLLKVSPKA ILNRTDRELK WQIPEIPLNG SPGRLRARMP IDSDNSEEEP
601: DIICYVKFSV QGNTSLSGIS LRAAAEGNTD FFEVDHRYET GVYMCN
Arabidopsis Description
At5g57460 [Source:UniProtKB/TrEMBL;Acc:Q9FKM4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.