Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 91.88 | 91.79 |
| Os11t0175900-01 | Rice | nucleus, plasma membrane | 56.79 | 81.85 |
| Zm00001d004785_P001 | Maize | mitochondrion | 56.25 | 81.82 |
| HORVU4Hr1G019290.1 | Barley | cytosol | 65.27 | 81.49 |
| VIT_14s0171g00280.t01 | Wine grape | cytosol, nucleus, plastid | 81.96 | 77.86 |
| KRG94459 | Soybean | endoplasmic reticulum, nucleus | 80.09 | 77.26 |
| KRH06999 | Soybean | endoplasmic reticulum | 79.2 | 76.2 |
| Solyc11g068640.1.1 | Tomato | nucleus | 78.93 | 76.14 |
| TraesCS4D01G091000.1 | Wheat | golgi | 77.86 | 75.56 |
| EES09396 | Sorghum | cytosol | 77.77 | 75.48 |
| TraesCS4B01G094200.1 | Wheat | unclear | 77.68 | 75.39 |
| TraesCS4A01G222200.1 | Wheat | cytosol | 77.41 | 75.2 |
| AT3G01780.1 | Thale cress | cytosol | 78.21 | 74.49 |
| Os02t0793100-01 | Rice | plasma membrane | 76.61 | 74.35 |
| CDY37153 | Canola | cytosol, endoplasmic reticulum, nucleus | 77.32 | 74.27 |
| CDX87673 | Canola | cytosol | 77.41 | 74.1 |
| Bra022067.1-P | Field mustard | nucleus | 77.41 | 72.8 |
| Zm00001d053028_P001 | Maize | mitochondrion | 71.16 | 68.94 |
| Zm00001d004784_P001 | Maize | cytosol | 20.36 | 59.69 |
| CDX91928 | Canola | cytosol | 1.52 | 36.17 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P17830_001 | EnsemblPlants:GSMUA_Achr6T17830_001 | EnsemblPlantsGene:GSMUA_Achr6G17830_001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 |
| GO:GO:0006897 | GO:GO:0008150 | InterPro:ARM-type_fold | InterPro:TPLATE | ncoils:Coil | PANTHER:PTHR36029 |
| SEG:seg | SUPFAM:SSF48371 | UniParc:UPI000295FD68 | UniProt:M0T7Y1 | MapMan:22.1.4.1 | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G17830_001]
Coordinates
chr6:-:11997608..12008790
Molecular Weight (calculated)
124353.0 Da
IEP (calculated)
6.209
GRAVY (calculated)
-0.121
Length
1120 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDILIAQIQA DLRSNDALRQ SGALLQALQQ SAAGRDVSAV ARSTCEEILA SPASAVSKKL AFDLIRSTRL TPDLWDTVCS AVRSDLDFPD PDVAAAATLG
0101: CVLARDDLVL LCHTAPGLLD RASAWWARIN QGTLDRSDAV SRAAFEAVGR LFQEFETKRM SRLAGDKLID GENSFAIRSN WVVAAIDLVW KKRNALIARS
0201: LVLPIESFRV TVFPLVFATK AVASGSVEVF RKISRLGGSS NDRSASAATD SSTSAEKHVG VSDVVSHLLP FLSSLDPPLI FEVGINMLSL ADVPGGKPEW
0301: ASASIIAILT LWDRQEFSSA RESIVRAVVT NLHLLDLSMQ VSLFKRLLLM VRNLRAESDR MYALACICRT ALCVDLFAKE SVRRGQKPLP GTDITSLFED
0401: VRIKDDLNSV ISKSLFREEL VASLVESCFQ LSLPLPEQKN SGTEGRVIGA LAYGTGYGAL NWTESALEVV EVCRPCVLWD CDGRTYAIDC YLKLLVRLCH
0501: IYDTRGGVKR IKDGASQEQI LYETRLRNLQ LQLIKDLREV HTPRISARLI WAIAEHFDME GLDPLLADDP EDPLNIFISN IHNVLFNTDS SATTSNKLQD
0601: VQAVLICAQR LGSRNPRAGQ LLSKELEDFK GGSMADSVNK HQSRFILQML KFVTSHPESR WVGISDTMGD YPFSHHKLTV QFFETSAAQD RKLEGLVHKA
0701: IQELWRPDPS ELRLLLTKGV DSSKHKVPPK AHSLTGSSDP CYVEAYHLAD SMDGRITLHL KILNLTELEL NRVDIRVGLS GALYFMDGSL QAVRQLRNLV
0801: SQDPVLSSVT VGVSHFERCA FWVQVLYYPF YGSGVSGDYE GDYAEEDSQV MRQRRVLKPE LGEPMILRCQ PYKIPLTELL LPHKCSPVEY FRLWPSLPAI
0901: LEYTGAYTYE GSGFKATAAQ QYEASPFLSG LKSLSSKPFH QVCSHFIRTV AGFQLCYAAK TWFGGFVGMM IFGASEVSRN VDLGDETTTM MCKFVVRASD
1001: ASITKEIGSD LQGWLDDITD GGVEYMPEEE VKIAAKERLR ISMEKIALFK AAKPPPQRPK AEEKKEEEEK NKENVDENGN PKEPSTLSTL TAEEVEHRAL
1101: QSAVLQEWHM LCKEKAVKVQ
0101: CVLARDDLVL LCHTAPGLLD RASAWWARIN QGTLDRSDAV SRAAFEAVGR LFQEFETKRM SRLAGDKLID GENSFAIRSN WVVAAIDLVW KKRNALIARS
0201: LVLPIESFRV TVFPLVFATK AVASGSVEVF RKISRLGGSS NDRSASAATD SSTSAEKHVG VSDVVSHLLP FLSSLDPPLI FEVGINMLSL ADVPGGKPEW
0301: ASASIIAILT LWDRQEFSSA RESIVRAVVT NLHLLDLSMQ VSLFKRLLLM VRNLRAESDR MYALACICRT ALCVDLFAKE SVRRGQKPLP GTDITSLFED
0401: VRIKDDLNSV ISKSLFREEL VASLVESCFQ LSLPLPEQKN SGTEGRVIGA LAYGTGYGAL NWTESALEVV EVCRPCVLWD CDGRTYAIDC YLKLLVRLCH
0501: IYDTRGGVKR IKDGASQEQI LYETRLRNLQ LQLIKDLREV HTPRISARLI WAIAEHFDME GLDPLLADDP EDPLNIFISN IHNVLFNTDS SATTSNKLQD
0601: VQAVLICAQR LGSRNPRAGQ LLSKELEDFK GGSMADSVNK HQSRFILQML KFVTSHPESR WVGISDTMGD YPFSHHKLTV QFFETSAAQD RKLEGLVHKA
0701: IQELWRPDPS ELRLLLTKGV DSSKHKVPPK AHSLTGSSDP CYVEAYHLAD SMDGRITLHL KILNLTELEL NRVDIRVGLS GALYFMDGSL QAVRQLRNLV
0801: SQDPVLSSVT VGVSHFERCA FWVQVLYYPF YGSGVSGDYE GDYAEEDSQV MRQRRVLKPE LGEPMILRCQ PYKIPLTELL LPHKCSPVEY FRLWPSLPAI
0901: LEYTGAYTYE GSGFKATAAQ QYEASPFLSG LKSLSSKPFH QVCSHFIRTV AGFQLCYAAK TWFGGFVGMM IFGASEVSRN VDLGDETTTM MCKFVVRASD
1001: ASITKEIGSD LQGWLDDITD GGVEYMPEEE VKIAAKERLR ISMEKIALFK AAKPPPQRPK AEEKKEEEEK NKENVDENGN PKEPSTLSTL TAEEVEHRAL
1101: QSAVLQEWHM LCKEKAVKVQ
0001: MDILFAQIQA DLRSNDALRQ SSALLQALQQ SAAGRDISVI AKSAVEEIVA SPASAVCKKL AFDLIRSTRL TPDLWDTVCS GVKTDLHFPD PDVTAAAVSI
0101: LAALPAFSLP KLISDCSSEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVGLLD KVSNWWARIG QNMLDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW RKRSALMARS LVLPVETFRA TVFPLVFAVK AVASGSVEVI RQLSKASSAA AAANATVVDS NAEKLVGVSD
0301: LVTHLAPFLA SSLDPALIFE VGINMLYLAD VAGGKPEWAS QSIIAILTLW DRQEFSSARE SIVRAVVTNL HLLDLHMQVS LFRRLLLMVR NLRAESDRMH
0401: ALACICRTAL CVHLFARESA RRGQKPLPGT DIISLFEDAR IKDDLNSVTS KSLFREELVA MLVESCFQLS LPLPEQKNSG MESRVIGALA YGTGYGALNW
0501: TEPALEVVEV CRPCVKWDCD GRTYAVDCYL KLLVRLCHIY DTRGGVKRLK DGASQDQILN ETRLQNLQRE LVKDLQEVNT PRILGRLIWT IAEHIDLEGL
0601: DPLLADDPDD PLNIIIANIH KVLFNLDAAA TTSNRLQDVQ AVLLCAQRMG SRHARAGQLL TKELEEYRNH AAADTVSKHQ TRLILQRIKY VSNLPERKWA
0701: GVSETRGDYP FSHHKLTVQF YEPSAAQDRK LEGLIHKAIL ELWRPKPTEL TLFLTKGVDS TSIKVPPTAY PLTGSSDPCY IEAYHLADTN DGRVTLHLKI
0801: INLTELELNR VDIRVGLSGA LYFMDGSPQA VRQLRNLVSQ DPVQCSVTVG VSQFERCGFW VQVLYYPFRG ARGEYDGDYI EEDPQIMKQK RGSKAELGEP
0901: VILRCQPYKI PLTELLLPHK ISPVEFFRLW PSLPAVAEYT GTYMYEGSGF MATAAQQYGA SPFLSGLKSL SSKPFHRVCS HIIRTVAGFQ LCYAAKTWHG
1001: GFVGMMIFGA SEVSRNMDLG DETTTMMCKF VVRASEASIT KQIESDIQGW CDDLTDGGVE YMPEDEVKAT AAEKLKISME RIALLKAAQP KKTSKIEEES
1101: ENEEEEEGEE EDDDEEVKEK KEKEEGKDKE EKKKKEKEKG TFSKLTAEET EHMALQAAVL QEWHILCKDR KYTKVN
0101: LAALPAFSLP KLISDCSSEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVGLLD KVSNWWARIG QNMLDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW RKRSALMARS LVLPVETFRA TVFPLVFAVK AVASGSVEVI RQLSKASSAA AAANATVVDS NAEKLVGVSD
0301: LVTHLAPFLA SSLDPALIFE VGINMLYLAD VAGGKPEWAS QSIIAILTLW DRQEFSSARE SIVRAVVTNL HLLDLHMQVS LFRRLLLMVR NLRAESDRMH
0401: ALACICRTAL CVHLFARESA RRGQKPLPGT DIISLFEDAR IKDDLNSVTS KSLFREELVA MLVESCFQLS LPLPEQKNSG MESRVIGALA YGTGYGALNW
0501: TEPALEVVEV CRPCVKWDCD GRTYAVDCYL KLLVRLCHIY DTRGGVKRLK DGASQDQILN ETRLQNLQRE LVKDLQEVNT PRILGRLIWT IAEHIDLEGL
0601: DPLLADDPDD PLNIIIANIH KVLFNLDAAA TTSNRLQDVQ AVLLCAQRMG SRHARAGQLL TKELEEYRNH AAADTVSKHQ TRLILQRIKY VSNLPERKWA
0701: GVSETRGDYP FSHHKLTVQF YEPSAAQDRK LEGLIHKAIL ELWRPKPTEL TLFLTKGVDS TSIKVPPTAY PLTGSSDPCY IEAYHLADTN DGRVTLHLKI
0801: INLTELELNR VDIRVGLSGA LYFMDGSPQA VRQLRNLVSQ DPVQCSVTVG VSQFERCGFW VQVLYYPFRG ARGEYDGDYI EEDPQIMKQK RGSKAELGEP
0901: VILRCQPYKI PLTELLLPHK ISPVEFFRLW PSLPAVAEYT GTYMYEGSGF MATAAQQYGA SPFLSGLKSL SSKPFHRVCS HIIRTVAGFQ LCYAAKTWHG
1001: GFVGMMIFGA SEVSRNMDLG DETTTMMCKF VVRASEASIT KQIESDIQGW CDDLTDGGVE YMPEDEVKAT AAEKLKISME RIALLKAAQP KKTSKIEEES
1101: ENEEEEEGEE EDDDEEVKEK KEKEEGKDKE EKKKKEKEKG TFSKLTAEET EHMALQAAVL QEWHILCKDR KYTKVN
Arabidopsis Description
TPLATEProtein TPLATE [Source:UniProtKB/Swiss-Prot;Acc:F4J8D3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.