Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37153 | Canola | cytosol, endoplasmic reticulum, nucleus | 97.86 | 98.2 |
| AT3G01780.1 | Thale cress | cytosol | 94.87 | 94.39 |
| GSMUA_Achr6P17830_001 | Banana | cytosol | 74.1 | 77.41 |
| GSMUA_Achr10P... | Banana | cytosol | 73.68 | 76.9 |
| Zm00001d004785_P001 | Maize | mitochondrion | 50.17 | 76.23 |
| Os11t0175900-01 | Rice | nucleus, plasma membrane | 50.6 | 76.19 |
| HORVU4Hr1G019290.1 | Barley | cytosol | 57.52 | 75.03 |
| EES09396 | Sorghum | cytosol | 70.17 | 71.14 |
| TraesCS4B01G094200.1 | Wheat | unclear | 69.91 | 70.88 |
| TraesCS4D01G091000.1 | Wheat | golgi | 69.74 | 70.71 |
| TraesCS4A01G222200.1 | Wheat | cytosol | 69.57 | 70.6 |
| Os02t0793100-01 | Rice | plasma membrane | 68.8 | 69.76 |
| Zm00001d053028_P001 | Maize | mitochondrion | 64.1 | 64.88 |
| Zm00001d004784_P001 | Maize | cytosol | 19.4 | 59.42 |
| CDX91928 | Canola | cytosol | 2.05 | 51.06 |
Protein Annotations
| EnsemblPlants:CDX87673 | EnsemblPlantsGene:GSBRNA2T00146684001 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006810 | GO:GO:0006897 |
| GO:GO:0008150 | InterPro:ARM-type_fold | InterPro:TPLATE | ncoils:Coil | PANTHER:PTHR36029 | ProteinID:CDX87673 |
| ProteinID:CDX87673.1 | SEG:seg | SUPFAM:SSF48371 | UniParc:UPI0004EE6BD9 | MapMan:22.1.4.1 | : |
Description
BnaC02g32760D
Coordinates
chrLK031851:-:56864..60962
Molecular Weight (calculated)
130288.0 Da
IEP (calculated)
5.695
GRAVY (calculated)
-0.179
Length
1170 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDILFAQIQA DLRSNDALRQ SSALLQALQQ SAAGRDISVI AKSAVEEIVA SPASAVCKKL AFDLIRSTRL TPDLWDTVCS GVKTDLHFPD PDVTAAAVSI
0101: LAALPSFSLP KLISDCSAEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVSLLD KVSTWWGRIG QNMIDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW KKRSALMARS LVLPVETFRS TVFPLVFAVK AVASGSVEVI RQLSKANTSG ANAAVVVDSN AEKLVGVSDL
0301: VTHLAPFLAS SLDPALIFEV GINMLYLADV AGGKPEWASQ SIIAILTLWD RQEFSSARES IVRAVVTNLH LLDLHMQVSL FRRLLLMVRN LRAESDRMHA
0401: LACICRTALC VHLFARESAR RGQKPLPGTD IISLFEDARI KDDLNSVTSK SLFREELVAM LVESCFQLSL PLPEQKFSGM ESRVIGALAY GTGYGALNWT
0501: EPALEVVEVC RPCVKWDCDG RTYAIDCYLK LLVRLCHIYD TRGGVKRLKD GASQDQMLNE TRLQNLQREL VKDLQEVNTP RILGRLIWTI AEHIDLEGLD
0601: PLLADDPDDP LNIIIANMHK VLFNLDAAAT TSNRLQDVQA VLLCAQRMGS RHARAGQLIT KELEEYRNHA AADTVSKHQT RLILQRIKYV SNLPERKWAG
0701: VSETRGDYPF SHHKLTVQFY EPSAAQDRKL EGLIHKAILE LWRPKPSELT LFLAKGANST SIKVPPTAYP LTGSSDPCYV EAYHLADTND GRVTLHLKII
0801: NLTELELNRV DIRVGLSGAL YFMDGSPQAV RQLRNLVSQD PVHCSVTVGV SQFERCGFWV QVLYYPFRGA RGDYDGDYLE EDPQMMKQKR GSRSELGEPV
0901: ILRCQPYKIP LTELLLPHKI SPVEFFRLWP SLPAVAEYTG TYTYEGSGFM ATAAQQYGAS PFLSGLNSLS SKPFHRVCSH IIRTVAGFQL CYAAKTWHGG
1001: FVGMMIFGAS EVSRNVDLGD ETTTMMCKFV VRASEASITK QIESDVQGWC DDLTDGGVEY MPEDEVKATA AEKLKISMER IALLKAAQPK KTPKTEEENE
1101: SEDEDEDDDE EDEEKEKEKE KEEEKKKEKE KEKGTLSKLT AEETEHMALQ AAVLQEWHML CKDRKLTKNN
0101: LAALPSFSLP KLISDCSAEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVSLLD KVSTWWGRIG QNMIDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW KKRSALMARS LVLPVETFRS TVFPLVFAVK AVASGSVEVI RQLSKANTSG ANAAVVVDSN AEKLVGVSDL
0301: VTHLAPFLAS SLDPALIFEV GINMLYLADV AGGKPEWASQ SIIAILTLWD RQEFSSARES IVRAVVTNLH LLDLHMQVSL FRRLLLMVRN LRAESDRMHA
0401: LACICRTALC VHLFARESAR RGQKPLPGTD IISLFEDARI KDDLNSVTSK SLFREELVAM LVESCFQLSL PLPEQKFSGM ESRVIGALAY GTGYGALNWT
0501: EPALEVVEVC RPCVKWDCDG RTYAIDCYLK LLVRLCHIYD TRGGVKRLKD GASQDQMLNE TRLQNLQREL VKDLQEVNTP RILGRLIWTI AEHIDLEGLD
0601: PLLADDPDDP LNIIIANMHK VLFNLDAAAT TSNRLQDVQA VLLCAQRMGS RHARAGQLIT KELEEYRNHA AADTVSKHQT RLILQRIKYV SNLPERKWAG
0701: VSETRGDYPF SHHKLTVQFY EPSAAQDRKL EGLIHKAILE LWRPKPSELT LFLAKGANST SIKVPPTAYP LTGSSDPCYV EAYHLADTND GRVTLHLKII
0801: NLTELELNRV DIRVGLSGAL YFMDGSPQAV RQLRNLVSQD PVHCSVTVGV SQFERCGFWV QVLYYPFRGA RGDYDGDYLE EDPQMMKQKR GSRSELGEPV
0901: ILRCQPYKIP LTELLLPHKI SPVEFFRLWP SLPAVAEYTG TYTYEGSGFM ATAAQQYGAS PFLSGLNSLS SKPFHRVCSH IIRTVAGFQL CYAAKTWHGG
1001: FVGMMIFGAS EVSRNVDLGD ETTTMMCKFV VRASEASITK QIESDVQGWC DDLTDGGVEY MPEDEVKATA AEKLKISMER IALLKAAQPK KTPKTEEENE
1101: SEDEDEDDDE EDEEKEKEKE KEEEKKKEKE KEKGTLSKLT AEETEHMALQ AAVLQEWHML CKDRKLTKNN
0001: MDILFAQIQA DLRSNDALRQ SSALLQALQQ SAAGRDISVI AKSAVEEIVA SPASAVCKKL AFDLIRSTRL TPDLWDTVCS GVKTDLHFPD PDVTAAAVSI
0101: LAALPAFSLP KLISDCSSEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVGLLD KVSNWWARIG QNMLDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW RKRSALMARS LVLPVETFRA TVFPLVFAVK AVASGSVEVI RQLSKASSAA AAANATVVDS NAEKLVGVSD
0301: LVTHLAPFLA SSLDPALIFE VGINMLYLAD VAGGKPEWAS QSIIAILTLW DRQEFSSARE SIVRAVVTNL HLLDLHMQVS LFRRLLLMVR NLRAESDRMH
0401: ALACICRTAL CVHLFARESA RRGQKPLPGT DIISLFEDAR IKDDLNSVTS KSLFREELVA MLVESCFQLS LPLPEQKNSG MESRVIGALA YGTGYGALNW
0501: TEPALEVVEV CRPCVKWDCD GRTYAVDCYL KLLVRLCHIY DTRGGVKRLK DGASQDQILN ETRLQNLQRE LVKDLQEVNT PRILGRLIWT IAEHIDLEGL
0601: DPLLADDPDD PLNIIIANIH KVLFNLDAAA TTSNRLQDVQ AVLLCAQRMG SRHARAGQLL TKELEEYRNH AAADTVSKHQ TRLILQRIKY VSNLPERKWA
0701: GVSETRGDYP FSHHKLTVQF YEPSAAQDRK LEGLIHKAIL ELWRPKPTEL TLFLTKGVDS TSIKVPPTAY PLTGSSDPCY IEAYHLADTN DGRVTLHLKI
0801: INLTELELNR VDIRVGLSGA LYFMDGSPQA VRQLRNLVSQ DPVQCSVTVG VSQFERCGFW VQVLYYPFRG ARGEYDGDYI EEDPQIMKQK RGSKAELGEP
0901: VILRCQPYKI PLTELLLPHK ISPVEFFRLW PSLPAVAEYT GTYMYEGSGF MATAAQQYGA SPFLSGLKSL SSKPFHRVCS HIIRTVAGFQ LCYAAKTWHG
1001: GFVGMMIFGA SEVSRNMDLG DETTTMMCKF VVRASEASIT KQIESDIQGW CDDLTDGGVE YMPEDEVKAT AAEKLKISME RIALLKAAQP KKTSKIEEES
1101: ENEEEEEGEE EDDDEEVKEK KEKEEGKDKE EKKKKEKEKG TFSKLTAEET EHMALQAAVL QEWHILCKDR KYTKVN
0101: LAALPAFSLP KLISDCSSEI ASCFDSPSDN LRFSITETLG CILARDDLVT LCENNVGLLD KVSNWWARIG QNMLDKSDAV SKVAFESVGR LFQEFDSKRM
0201: SRLAGDKLVD SENSLAIRSK WVSSMVDIVW RKRSALMARS LVLPVETFRA TVFPLVFAVK AVASGSVEVI RQLSKASSAA AAANATVVDS NAEKLVGVSD
0301: LVTHLAPFLA SSLDPALIFE VGINMLYLAD VAGGKPEWAS QSIIAILTLW DRQEFSSARE SIVRAVVTNL HLLDLHMQVS LFRRLLLMVR NLRAESDRMH
0401: ALACICRTAL CVHLFARESA RRGQKPLPGT DIISLFEDAR IKDDLNSVTS KSLFREELVA MLVESCFQLS LPLPEQKNSG MESRVIGALA YGTGYGALNW
0501: TEPALEVVEV CRPCVKWDCD GRTYAVDCYL KLLVRLCHIY DTRGGVKRLK DGASQDQILN ETRLQNLQRE LVKDLQEVNT PRILGRLIWT IAEHIDLEGL
0601: DPLLADDPDD PLNIIIANIH KVLFNLDAAA TTSNRLQDVQ AVLLCAQRMG SRHARAGQLL TKELEEYRNH AAADTVSKHQ TRLILQRIKY VSNLPERKWA
0701: GVSETRGDYP FSHHKLTVQF YEPSAAQDRK LEGLIHKAIL ELWRPKPTEL TLFLTKGVDS TSIKVPPTAY PLTGSSDPCY IEAYHLADTN DGRVTLHLKI
0801: INLTELELNR VDIRVGLSGA LYFMDGSPQA VRQLRNLVSQ DPVQCSVTVG VSQFERCGFW VQVLYYPFRG ARGEYDGDYI EEDPQIMKQK RGSKAELGEP
0901: VILRCQPYKI PLTELLLPHK ISPVEFFRLW PSLPAVAEYT GTYMYEGSGF MATAAQQYGA SPFLSGLKSL SSKPFHRVCS HIIRTVAGFQ LCYAAKTWHG
1001: GFVGMMIFGA SEVSRNMDLG DETTTMMCKF VVRASEASIT KQIESDIQGW CDDLTDGGVE YMPEDEVKAT AAEKLKISME RIALLKAAQP KKTSKIEEES
1101: ENEEEEEGEE EDDDEEVKEK KEKEEGKDKE EKKKKEKEKG TFSKLTAEET EHMALQAAVL QEWHILCKDR KYTKVN
Arabidopsis Description
TPLATEProtein TPLATE [Source:UniProtKB/Swiss-Prot;Acc:F4J8D3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.