Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| CDX73889 | plasma membrane |
| CDX81426 | |
| CDX86594 | |
| CDX87673 | |
| CDX88623 | |
| CDX94190 | |
| CDY00724 | plasma membrane |
| CDY00997 | plasma membrane |
| CDY06725 | golgi |
| CDY07049 | plasma membrane |
| CDY07629 | plasma membrane |
| CDY08549 | plasma membrane |
| CDY11868 | |
| CDY15531 | |
| CDY18283 | |
| CDY18578 | |
| CDY20508 | plasma membrane |
| CDY25907 | |
| CDY36301 | plasma membrane |
| CDY37153 | |
| CDY38299 | |
| CDY53396 | |
| CDY60337 | plasma membrane |
| CDY61712 | plasma membrane |
| CDY70589 | golgi |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX92339 | Canola | cytosol | 99.7 | 99.8 |
| Bra002427.1-P | Field mustard | cytosol | 99.6 | 99.7 |
| AT5G22780.1 | Thale cress | cytosol | 95.04 | 94.57 |
| AT5G22770.1 | Thale cress | cytosol | 94.84 | 94.47 |
| CDY20343 | Canola | cytosol | 28.67 | 92.63 |
| Solyc11g066760.1.1 | Tomato | cytosol | 42.56 | 91.86 |
| GSMUA_Achr5P15260_001 | Banana | cytosol | 11.51 | 88.55 |
| Os03t0112101-00 | Rice | plasma membrane | 33.63 | 86.92 |
| CDY20344 | Canola | cytosol | 53.47 | 83.57 |
| CDY29719 | Canola | cytosol | 81.15 | 83.38 |
| VIT_06s0061g01170.t01 | Wine grape | cytosol | 83.13 | 82.56 |
| KRH22743 | Soybean | cytosol, endoplasmic reticulum | 82.84 | 81.86 |
| KRH26563 | Soybean | endoplasmic reticulum | 82.64 | 81.67 |
| Solyc06g074650.2.1 | Tomato | plastid | 80.95 | 80.24 |
| GSMUA_Achr1P01770_001 | Banana | cytosol | 77.28 | 76.0 |
| KXG40365 | Sorghum | cytosol | 76.29 | 73.66 |
| TraesCS4B01G395700.3 | Wheat | cytosol, unclear | 73.81 | 71.47 |
| TraesCS5A01G557300.1 | Wheat | cytosol | 73.51 | 71.11 |
| Zm00001d027333_P018 | Maize | cytosol | 75.2 | 70.97 |
| Zm00001d048511_P008 | Maize | cytosol | 74.7 | 70.7 |
| HORVU4Hr1G089310.1 | Barley | cytosol | 72.12 | 68.46 |
| Solyc11g066770.1.1 | Tomato | cytosol | 29.46 | 68.43 |
| GSMUA_Achr5P15250_001 | Banana | cytosol | 63.89 | 64.85 |
| Os03t0112400-01 | Rice | cytosol | 9.82 | 64.71 |
| CDX91727 | Canola | mitochondrion | 4.17 | 35.0 |
| CDY24514 | Canola | cytosol | 5.85 | 29.21 |
| CDY59088 | Canola | mitochondrion | 21.63 | 25.0 |
| CDY47649 | Canola | mitochondrion | 21.43 | 24.77 |
| CDY25807 | Canola | mitochondrion | 21.43 | 24.69 |
| CDY28466 | Canola | mitochondrion | 21.33 | 24.6 |
| CDY33619 | Canola | mitochondrion | 9.72 | 21.54 |
| CDY70074 | Canola | cytosol | 13.29 | 21.2 |
| CDX84997 | Canola | cytosol | 15.18 | 17.59 |
| CDY42099 | Canola | cytosol | 16.37 | 17.48 |
| CDY04318 | Canola | cytosol, nucleus, plastid | 13.89 | 17.43 |
| CDX92225 | Canola | cytosol, nucleus, plastid | 14.29 | 16.82 |
| CDY24454 | Canola | cytosol | 14.19 | 16.74 |
| CDY68338 | Canola | nucleus | 13.89 | 16.47 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:2.60.40.1230 | MapMan:22.1.3.1 | Gene3D:3.30.310.10 | GO:A0A078GNR0 | UniProt:A0A078GNR0 |
| InterPro:AP2_complex_asu | InterPro:ARM-like | InterPro:ARM-type_fold | EnsemblPlants:CDY26951 | ProteinID:CDY26951 | ProteinID:CDY26951.1 |
| InterPro:Clathrin/coatomer_adapt-like_N | InterPro:Clathrin_a-adaptin_app_sub_C | InterPro:Clathrin_a/b/g-adaptin_app_Ig | InterPro:Clathrin_app_Ig-like_sf | InterPro:Coatomer/calthrin_app_sub_C | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005905 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0006897 | GO:GO:0008150 |
| GO:GO:0008565 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030131 |
| GO:GO:0035615 | GO:GO:0072583 | EnsemblPlantsGene:GSBRNA2T00036702001 | InterPro:IPR011989 | InterPro:IPR012295 | PFAM:PF01602 |
| PFAM:PF02296 | PFAM:PF02883 | PIRSF:PIRSF037091 | PANTHER:PTHR22780 | PANTHER:PTHR22780:SF4 | SMART:SM00809 |
| SUPFAM:SSF48371 | SUPFAM:SSF49348 | SUPFAM:SSF55711 | InterPro:TBP_dom_sf | UniParc:UPI0004EE92CD | SEG:seg |
Description
BnaC09g36320DBnaC09g36320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GNR0]
Coordinates
chrLK032197:-:269565..278485
Molecular Weight (calculated)
111725.0 Da
IEP (calculated)
6.234
GRAVY (calculated)
-0.077
Length
1008 amino acids
Sequence
(BLAST)
(BLAST)
0001: MTGMRGLSVF ISDIRNCQNK EAERLRVDKE LGNIRTCFKN EKVLTPYKKK KYVWKMLYIH MLGYDVDFGH MEAVSLISAP KYPEKQVGYI VTSCLLNENH
0101: DFLKLAINTV RNDIIGRNET FQCLALTLVG NIGGRDFAES LAPDVQKLLI SSSCRPLVRK KAALCLLRLF RKNPDAINVD GWADRMTQLL DERDLGVLTS
0201: STSLLVALVS NNHEAYSSCL PKCVKILERL ARNQDVPQEY TYYGIPSPWL QVKAMRALQY FPTIEDPSTR KSLFEVLQRI LMGTDVVKNV NKNNASHAVL
0301: FEALSLVIHL DAEKEMMSQC VALLGKFISV REPNIRYLGL ENMTRMLMVT DVQDVIKKHQ SQIITSLKDP DISIRRRALD LLYGMCDVSN AKDIVEELLQ
0401: YLSTAEFSMR EELSLKAAIL AEKFAPDLSW YVDVILQLID KAGDFVSDDI WFRVVQFVTN NEDLQPYAAS KAREYLDKIA IHETMVKVSA YILGEYGHLL
0501: ARQPGCSASE LFSILHEKLP TVSTPTIPIL LSTYAKLLMH TQPRDPELEK KVWAVFKKYE SCIDVEIQQR AVEYFELSKK GAAFMDVLAE MPKFPERQSS
0601: LIKKAEVVED TADQSAIKLR AQQQPSNALV LADPQPVSGA PPPLKIPSEP QSVARTISQP NGTSSNIDPQ APSPDLLSDL LGPLAIEAPP GVVSTEQHGP
0701: TGTEGVPDEV DGSAIVPVGE QTNNVEVIGN IAERFHALCL KDSGVLYEDP YIQIGIKAEW RGHHGRLVLF LGNKSTNPLT SVQALILPPA HLKLELSPVP
0801: DTIPPRAQVQ SPLEVMNIRP SRDVAVLDFS YKLGTIVVGA KLRIPAVLNK FLQPLQLTSE EFFPQWRALS GPPLKLQEVV RGVRPLALPE MANLFNSFRV
0901: TICPGLDPNP NNLVASTTFY SETTGAMLCL ARIETDPADR TQLRMTVGSG DPTLTFELKE FIKEQLIAIP MGSRALVPAA AAPPPPVAQP PSPAALADDP
1001: GAMLAGLL
0101: DFLKLAINTV RNDIIGRNET FQCLALTLVG NIGGRDFAES LAPDVQKLLI SSSCRPLVRK KAALCLLRLF RKNPDAINVD GWADRMTQLL DERDLGVLTS
0201: STSLLVALVS NNHEAYSSCL PKCVKILERL ARNQDVPQEY TYYGIPSPWL QVKAMRALQY FPTIEDPSTR KSLFEVLQRI LMGTDVVKNV NKNNASHAVL
0301: FEALSLVIHL DAEKEMMSQC VALLGKFISV REPNIRYLGL ENMTRMLMVT DVQDVIKKHQ SQIITSLKDP DISIRRRALD LLYGMCDVSN AKDIVEELLQ
0401: YLSTAEFSMR EELSLKAAIL AEKFAPDLSW YVDVILQLID KAGDFVSDDI WFRVVQFVTN NEDLQPYAAS KAREYLDKIA IHETMVKVSA YILGEYGHLL
0501: ARQPGCSASE LFSILHEKLP TVSTPTIPIL LSTYAKLLMH TQPRDPELEK KVWAVFKKYE SCIDVEIQQR AVEYFELSKK GAAFMDVLAE MPKFPERQSS
0601: LIKKAEVVED TADQSAIKLR AQQQPSNALV LADPQPVSGA PPPLKIPSEP QSVARTISQP NGTSSNIDPQ APSPDLLSDL LGPLAIEAPP GVVSTEQHGP
0701: TGTEGVPDEV DGSAIVPVGE QTNNVEVIGN IAERFHALCL KDSGVLYEDP YIQIGIKAEW RGHHGRLVLF LGNKSTNPLT SVQALILPPA HLKLELSPVP
0801: DTIPPRAQVQ SPLEVMNIRP SRDVAVLDFS YKLGTIVVGA KLRIPAVLNK FLQPLQLTSE EFFPQWRALS GPPLKLQEVV RGVRPLALPE MANLFNSFRV
0901: TICPGLDPNP NNLVASTTFY SETTGAMLCL ARIETDPADR TQLRMTVGSG DPTLTFELKE FIKEQLIAIP MGSRALVPAA AAPPPPVAQP PSPAALADDP
1001: GAMLAGLL
0001: MTGMRGLSVF ISDVRNCQNK EAERLRVDKE LGNIRTCFKN EKVLTPYKKK KYVWKMLYIH MLGYDVDFGH MEAVSLISAP KYPEKQVGYI VTSCLLNENH
0101: DFLKLAINTV RNDIIGRNET FQCLALTLVG NIGGRDFAES LAPDVQKLLI SSSCRPLVRK KAALCLLRLF RKNPDAVNVD GWADRMAQLL DERDLGVLTS
0201: STSLLVALVS NNHEAYSSCL PKCVKILERL ARNQDVPQEY TYYGIPSPWL QVKAMRALQY FPTIEDPSTR KALFEVLQRI LMGTDVVKNV NKNNASHAVL
0301: FEALSLVMHL DAEKEMMSQC VALLGKFISV REPNIRYLGL ENMTRMLMVT DVQDIIKKHQ SQIITSLKDP DISIRRRALD LLYGMCDVSN AKDIVEELLQ
0401: YLSTAEFSMR EELSLKAAIL AEKFAPDLSW YVDVILQLID KAGDFVSDDI WFRVVQFVTN NEDLQPYAAS KAREYMDKIA IHETMVKVSA YILGEYGHLL
0501: ARQPGCSASE LFSILHEKLP TVSTPTIPIL LSTYAKLLMH AQPPDPELQK KVWAVFKKYE SCIDVEIQQR AVEYFELSKK GPAFMDVLAE MPKFPERQSS
0601: LIKKAENVED TADQSAIKLR AQQQPSNAIV LADPQPVNGA PPPLKVPILS GSTDPESVAR SLSHPNGTLS NIDPQTPSPD LLSDLLGPLA IEAPPGAVSY
0701: EQHGPVGAEG VPDEIDGSAI VPVEEQTNTV ELIGNIAERF HALCLKDSGV LYEDPHIQIG IKAEWRGHHG RLVLFMGNKN TSPLTSVQAL ILPPAHLRLD
0801: LSPVPDTIPP RAQVQSPLEV MNIRPSRDVA VLDFSYKFGT NVVSAKLRIP ATLNKFLQPL QLTSEEFFPQ WRAISGPPLK LQEVVRGVRP LALPEMANLF
0901: NSFHVTICPG LDPNPNNLVA STTFYSETTG AMLCLARIET DPADRTQLRL TVGSGDPTLT FELKEFIKEQ LITIPMGSRA LVPAAGPAPS PAVQPPSPAA
1001: LADDPGAMLA GLL
0101: DFLKLAINTV RNDIIGRNET FQCLALTLVG NIGGRDFAES LAPDVQKLLI SSSCRPLVRK KAALCLLRLF RKNPDAVNVD GWADRMAQLL DERDLGVLTS
0201: STSLLVALVS NNHEAYSSCL PKCVKILERL ARNQDVPQEY TYYGIPSPWL QVKAMRALQY FPTIEDPSTR KALFEVLQRI LMGTDVVKNV NKNNASHAVL
0301: FEALSLVMHL DAEKEMMSQC VALLGKFISV REPNIRYLGL ENMTRMLMVT DVQDIIKKHQ SQIITSLKDP DISIRRRALD LLYGMCDVSN AKDIVEELLQ
0401: YLSTAEFSMR EELSLKAAIL AEKFAPDLSW YVDVILQLID KAGDFVSDDI WFRVVQFVTN NEDLQPYAAS KAREYMDKIA IHETMVKVSA YILGEYGHLL
0501: ARQPGCSASE LFSILHEKLP TVSTPTIPIL LSTYAKLLMH AQPPDPELQK KVWAVFKKYE SCIDVEIQQR AVEYFELSKK GPAFMDVLAE MPKFPERQSS
0601: LIKKAENVED TADQSAIKLR AQQQPSNAIV LADPQPVNGA PPPLKVPILS GSTDPESVAR SLSHPNGTLS NIDPQTPSPD LLSDLLGPLA IEAPPGAVSY
0701: EQHGPVGAEG VPDEIDGSAI VPVEEQTNTV ELIGNIAERF HALCLKDSGV LYEDPHIQIG IKAEWRGHHG RLVLFMGNKN TSPLTSVQAL ILPPAHLRLD
0801: LSPVPDTIPP RAQVQSPLEV MNIRPSRDVA VLDFSYKFGT NVVSAKLRIP ATLNKFLQPL QLTSEEFFPQ WRAISGPPLK LQEVVRGVRP LALPEMANLF
0901: NSFHVTICPG LDPNPNNLVA STTFYSETTG AMLCLARIET DPADRTQLRL TVGSGDPTLT FELKEFIKEQ LITIPMGSRA LVPAAGPAPS PAVQPPSPAA
1001: LADDPGAMLA GLL
Arabidopsis Description
ALPHAC-ADAP-2 complex subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.