CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 2
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68338	Canola	nucleus	94.02	88.82
AT1G48760.2	Thale cress	cytosol	84.31	77.91
CDX92225	Canola	cytosol, nucleus, plastid	74.84	70.21
CDY24454	Canola	cytosol	73.85	69.44
KRH41691	Soybean	cytosol	57.41	50.33
VIT_17s0000g03430.t01	Wine grape	cytosol	60.02	50.26
KRH60392	Soybean	cytosol	60.4	49.64
PGSC0003DMT400014395	Potato	cytosol	56.79	47.01
Solyc03g119270.1.1	Tomato	nucleus	56.79	47.01
GSMUA_Achr4P06740_001	Banana	cytosol, plastid	36.24	40.76
EES14423	Sorghum	cytosol	13.82	40.51
EER88616	Sorghum	cytosol	25.53	40.2
GSMUA_Achr4P13750_001	Banana	nucleus, plastid	38.98	39.27
Os01t0512200-01	Rice	plasma membrane	41.72	35.45
KXG20021	Sorghum	cytosol	30.76	35.29
EES17171	Sorghum	plastid	41.47	35.13
Zm00001d023820_P001	Maize	mitochondrion	40.47	35.1
Zm00001d041626_P001	Maize	plastid	41.1	35.07
TraesCS1A01G211900.1	Wheat	plastid	40.22	35.03
TraesCS1D01G215000.1	Wheat	cytosol, plastid	40.1	34.89
TraesCS1B01G225600.1	Wheat	plastid	39.98	34.78
HORVU1Hr1G054180.2	Barley	cytosol, plastid	40.6	34.39
CDY20343	Canola	cytosol	9.09	23.4
CDX91727	Canola	mitochondrion	3.49	23.33
CDY70074	Canola	cytosol	14.94	18.99
CDY24514	Canola	cytosol	4.73	18.81
CDY28466	Canola	mitochondrion	17.81	16.36
CDY25807	Canola	mitochondrion	17.81	16.34
CDY59088	Canola	mitochondrion	17.68	16.28
CDY47649	Canola	mitochondrion	17.68	16.28
CDX84997	Canola	cytosol	15.94	14.71
CDY42099	Canola	cytosol	16.69	14.19
CDX92339	Canola	cytosol	17.43	13.9
CDY26951	Canola	cytosol	17.43	13.89
CDY29719	Canola	cytosol	15.94	13.05
CDY33619	Canola	mitochondrion	7.22	12.75
CDY20344	Canola	cytosol	6.85	8.53

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.1.5.1	GO:A0A078EXI4	InterPro:AP3_complex_dsu	InterPro:ARM-like	InterPro:ARM-type_fold
EnsemblPlants:CDY04318	ProteinID:CDY04318	ProteinID:CDY04318.1	InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	GO:GO:0030123
EnsemblPlantsGene:GSBRNA2T00118139001	InterPro:IPR011989	PFAM:PF01602	PIRSF:PIRSF037092	PANTHER:PTHR22781	SUPFAM:SSF48371
UniParc:UPI0004EEE55A	SEG:seg	:	:	:	:

Description

BnaC05g25800D

Coordinates

chrLK031951:-:651457..653868

Molecular Weight (calculated)

89326.5 Da

IEP (calculated)

5.861

GRAVY (calculated)

-0.078

Length

803 amino acids

Sequence
(BLAST)

001: MSSSNHLMDN MFQRSLEDLI KGFRLQLLGE SSFISRALEE IRREIKATDL STKSTALHKL SYLAAIHGVD MSWAAFHAVE VVSSSRFHHK RIGYQAITQS
101: FHDQTSVLLL ITNQLRKDLN SVNEYEVSLG LECLSRIGTH DLARDLSPEV FTLLGSSKSF VRKKATGVVL RVFDKYPDAV KVCFKRLVEN LETSDPQILS
201: AVVGVFCELA SKDPSSCLPL APEFFKILIE SRNNWVLIKV LKIFAKLASV EPRLGKKVAE PICEHMKRTV AKSLVFECVR TVVSSLSDHE AAVKLAVAKI
301: GEFLVEDDPN LKYLGLHALS IAAPKHLWAV LENKEAVVKA LSDEDPNVKL EALHLLMAMV TEDNVSEISR ILMNYALKSD PLFCNEIIIS VLSVCSRNAY
401: EIIVDFNWYV SLLGEMTRIP NCQRGEEIEH QLIDIGMRVG DARPQLVRVS WALLIDPAML GNLFLHPILS AASWVSGEYV EFAKNPYELV EALVQPRTDL
501: LPPYIRAIYI HSVFKVLVFC LGSYFSAQES SSGSSSTVAF TYESILNLVN VIEIGVWPLS GAYDVEVQER AKNVLGFIGM AKQDIAKKVN LQDNEAEACR
601: VTAFMEDVFS EELGPISANA QEKVFVPDGL ELEENLGDLE EICGKFLKPV ESDSVPCADK ISFSVSNLRI RDQQEASSSS TSLPPKASSS LLAEHRKRHG
701: MYYLTSEKND PDSNGTPNDY PPANDLASEI LLDPLDPKRK AKHRKSRPVV VKLDEGDESR IITSQAKTKQ ESVTDDESLS RAIQSALLVN KKGKEREAKG
801: IQI

Best Arabidopsis Sequence Match ( AT1G48760.1 )
(BLAST)

001: MSSSSTSIMD NLFQRSLEDL IKGFRLQLLG ESNFISRAVE EIRREIKATD LSTKSTALHK LSYLAALHGV DMSWAAFHAV EVVSSSRFQH KRIGYQAITQ
101: SFNDQTSVML LITNQVRKDL NSANEYEVSL ALECLSRIGT HDLARDLTPE VFTLLGSSKS FVKKKAIGVV LRVFEKYHDA VKVCFKRLVE NLETSDPQIL
201: SAVVGVFCEL ATKDPQSCLP LAPEFYKVLV DSRNNWVLIK VLKIFAKLAL IEPRLGKKVA EPICEHMRRT VAKSLVFECV RTVVSSLSDN EAAVKLAVAK
301: IREFLVEDDP NLKYLGLNAL SIVAPKHLWA VLENKEVVVK AMSDEDPNVK LEALHLLMAM VNEDNVSEIS RILMNYALKS DPLFCNEIIF SVLSACSRNA
401: YEIIVDFDWY LSLLGEMARI PHCQRGEDIE HQLIDIGMRV RDARPQLVRV SWALLIDPAL LGNLFLHPIL SAAAWVSGEY VEFSKNPYET VEALLQPRTD
501: LLPPSIKAIY IHSAFKVLVF CLGSYFSSQE PTSSSLAQES SSGSLLVNVF THESILSLVN VIELGLGPLS GYHDVEVQER AKNVLGYISV IKQEIAEQLN
601: LQDNETEASR VTAFMEDVFS EEFGPISATA QEKVCVPDGL ELKENLGDLE EICGEHLKPV ESDSVSYTDK ISFSVSKLRI RDQQEATSSS SPPHEASSLL
701: AEHRKRHGMY YLTSQKEDQD SNGTSSDYPL ANELANEISQ DSFNPKRKPN QSKPRPVVVK LDDGDESRIT PQAKTNIQTA NDDESLSRAI QSALLVKNKG
801: KEKDRYEGNP NSGQQEKEES SRIENHQNSE KKKKKKKKKK GEGSSKHKSR RQNEVASASE QVIIPDFLL

Arabidopsis Description

DELTA-ADRAP-3 complex subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C744]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.