CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 3
peroxisome 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14423	Sorghum	cytosol	50.2	93.43
KXG20021	Sorghum	cytosol	88.24	64.29
EES17171	Sorghum	plastid	91.57	49.26
Zm00001d023820_P001	Maize	mitochondrion	85.49	47.08
Zm00001d041626_P001	Maize	plastid	84.71	45.91
Os01t0512200-01	Rice	plasma membrane	67.65	36.51
TraesCS1D01G215000.1	Wheat	cytosol, plastid	65.69	36.29
TraesCS1B01G225600.1	Wheat	plastid	65.69	36.29
TraesCS1A01G211900.1	Wheat	plastid	65.1	36.01
HORVU1Hr1G054180.2	Barley	cytosol, plastid	64.51	34.7
GSMUA_Achr4P13750_001	Banana	nucleus, plastid	48.63	31.12
GSMUA_Achr4P06740_001	Banana	cytosol, plastid	42.35	30.25
CDY04318	Canola	cytosol, nucleus, plastid	40.2	25.53
Bra032266.1-P	Field mustard	nucleus	40.59	24.35
CDY68338	Canola	nucleus	40.59	24.35
CDX92225	Canola	cytosol, nucleus, plastid	40.2	23.95
Bra022309.1-P	Field mustard	nucleus	40.0	23.83
AT1G48760.2	Thale cress	cytosol	40.39	23.71
CDY24454	Canola	cytosol	39.41	23.54
PGSC0003DMT400014395	Potato	cytosol	43.92	23.09
Solyc03g119270.1.1	Tomato	nucleus	43.92	23.09
VIT_17s0000g03430.t01	Wine grape	cytosol	42.94	22.84
KRH41691	Soybean	cytosol	40.78	22.71
KRH60392	Soybean	cytosol	42.55	22.21
KXG19397	Sorghum	cytosol, plastid	14.31	8.35
KXG31353	Sorghum	cytosol	14.71	8.32
EES04102	Sorghum	cytosol	13.73	7.22
KXG40365	Sorghum	cytosol	14.12	6.9

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.1.5.1	InterPro:AP3_complex_dsu	InterPro:ARM-like	InterPro:ARM-type_fold	UniProt:C5Z5N0
InterPro:Clathrin/coatomer_adapt-like_N	EnsemblPlants:EER88616	ProteinID:EER88616	ProteinID:EER88616.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886
GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	GO:GO:0030123
InterPro:IPR011989	PFAM:PF01602	PANTHER:PTHR22781	EnsemblPlantsGene:SORBI_3010G184900	SUPFAM:SSF48371	UniParc:UPI0001A893F0
RefSeq:XP_002437249.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:+:52475909..52477549

Molecular Weight (calculated)

56002.1 Da

IEP (calculated)

5.041

GRAVY (calculated)

-0.065

Length

510 amino acids

Sequence
(BLAST)

001: MSLTFECIRT VLTTLPAHDA TVRLAIGKAK EFIAADDDPN LRYLGLLALE LSLGDADTNI RQEALHLNMG MVNENNVMDI AGMLIGHVAE SDPEFANDIL
101: GAVLAACGHN VYEMVVDFDW YVSLLADMAR TLHCAQGDEI GRQLVNVGLR VQDARPELVR SSRTLLIDPA LHGNHFLFPI LSAAAWVSGE YVDLTKDPVE
201: LVEALLQPRI GLLPISVRAV YIHAVFKVIT WCFSVYVGRL GDSGMAMDVT FDRLAADQTV SLDSNVALGF VGEQDIGAST VRKDPFSHES ILYMINLIQT
301: TVGPLINCNE VKVQDRAHNL IGFVHLVREI QELNKTKVAH GDKPKLGLVS VNAQMKVAPP DGLVLNENLV ELAGMMSEDD STPSTSIFFY PCSRHYVDTR
401: DEPAVSICLS SLSEHRKRHG LFYLQTGKTE DEPNDYPQAN DSLPSSSNNS VNDDKLKTAE LVFGRKKSTT TKSRPKVVKL DTEDFLSSMT TRAAPSQPGI
501: EGYDHGIKKL

Best Arabidopsis Sequence Match ( AT1G48760.1 )
(BLAST)

001: MSSSSTSIMD NLFQRSLEDL IKGFRLQLLG ESNFISRAVE EIRREIKATD LSTKSTALHK LSYLAALHGV DMSWAAFHAV EVVSSSRFQH KRIGYQAITQ
101: SFNDQTSVML LITNQVRKDL NSANEYEVSL ALECLSRIGT HDLARDLTPE VFTLLGSSKS FVKKKAIGVV LRVFEKYHDA VKVCFKRLVE NLETSDPQIL
201: SAVVGVFCEL ATKDPQSCLP LAPEFYKVLV DSRNNWVLIK VLKIFAKLAL IEPRLGKKVA EPICEHMRRT VAKSLVFECV RTVVSSLSDN EAAVKLAVAK
301: IREFLVEDDP NLKYLGLNAL SIVAPKHLWA VLENKEVVVK AMSDEDPNVK LEALHLLMAM VNEDNVSEIS RILMNYALKS DPLFCNEIIF SVLSACSRNA
401: YEIIVDFDWY LSLLGEMARI PHCQRGEDIE HQLIDIGMRV RDARPQLVRV SWALLIDPAL LGNLFLHPIL SAAAWVSGEY VEFSKNPYET VEALLQPRTD
501: LLPPSIKAIY IHSAFKVLVF CLGSYFSSQE PTSSSLAQES SSGSLLVNVF THESILSLVN VIELGLGPLS GYHDVEVQER AKNVLGYISV IKQEIAEQLN
601: LQDNETEASR VTAFMEDVFS EEFGPISATA QEKVCVPDGL ELKENLGDLE EICGEHLKPV ESDSVSYTDK ISFSVSKLRI RDQQEATSSS SPPHEASSLL
701: AEHRKRHGMY YLTSQKEDQD SNGTSSDYPL ANELANEISQ DSFNPKRKPN QSKPRPVVVK LDDGDESRIT PQAKTNIQTA NDDESLSRAI QSALLVKNKG
801: KEKDRYEGNP NSGQQEKEES SRIENHQNSE KKKKKKKKKK GEGSSKHKSR RQNEVASASE QVIIPDFLL

Arabidopsis Description

DELTA-ADRAP-3 complex subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C744]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.