Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0112101-00 | Rice | plasma membrane | 36.88 | 98.72 |
| Zm00001d027333_P018 | Maize | cytosol | 96.26 | 94.1 |
| Zm00001d048511_P008 | Maize | cytosol | 95.98 | 94.08 |
| GSMUA_Achr5P15260_001 | Banana | cytosol | 11.49 | 91.6 |
| TraesCS4B01G395700.3 | Wheat | cytosol, unclear | 88.51 | 88.76 |
| Solyc11g066760.1.1 | Tomato | cytosol | 39.66 | 88.65 |
| TraesCS5A01G557300.1 | Wheat | cytosol | 88.41 | 88.58 |
| CDY20343 | Canola | cytosol | 26.34 | 88.14 |
| Os03t0112400-01 | Rice | cytosol | 12.64 | 86.27 |
| HORVU4Hr1G089310.1 | Barley | cytosol | 85.73 | 84.28 |
| GSMUA_Achr1P01770_001 | Banana | cytosol | 81.03 | 82.54 |
| VIT_06s0061g01170.t01 | Wine grape | cytosol | 78.35 | 80.59 |
| Solyc06g074650.2.1 | Tomato | plastid | 76.34 | 78.37 |
| AT5G22780.1 | Thale cress | cytosol | 74.14 | 76.41 |
| Bra037603.1-P | Field mustard | cytosol | 74.14 | 76.33 |
| CDY26951 | Canola | cytosol | 73.66 | 76.29 |
| CDX92339 | Canola | cytosol | 73.56 | 76.27 |
| Bra002427.1-P | Field mustard | cytosol | 73.56 | 76.27 |
| AT5G22770.1 | Thale cress | cytosol | 73.75 | 76.09 |
| CDY29719 | Canola | cytosol | 67.72 | 72.07 |
| GSMUA_Achr5P15250_001 | Banana | cytosol | 66.67 | 70.09 |
| CDY20344 | Canola | cytosol | 41.95 | 67.91 |
| Solyc11g066770.1.1 | Tomato | cytosol | 26.15 | 62.9 |
| KRH25154 | Soybean | cytosol | 23.56 | 60.44 |
| KXG19397 | Sorghum | cytosol, plastid | 21.26 | 25.4 |
| KXG31353 | Sorghum | cytosol | 20.98 | 24.31 |
| EES04102 | Sorghum | cytosol | 17.24 | 18.58 |
| EER88616 | Sorghum | cytosol | 6.9 | 14.12 |
| EES17171 | Sorghum | plastid | 12.74 | 14.03 |
| KXG20021 | Sorghum | cytosol | 9.2 | 13.71 |
| EES14423 | Sorghum | cytosol | 3.16 | 12.04 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:2.60.40.1230 | MapMan:22.1.3.1 | Gene3D:3.30.310.10 | UniProt:A0A1B6QR39 | InterPro:AP2_complex_asu |
| InterPro:ARM-like | InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N | InterPro:Clathrin_a-adaptin_app_sub_C | InterPro:Clathrin_a/b/g-adaptin_app_Ig | InterPro:Clathrin_app_Ig-like_sf |
| InterPro:Coatomer/calthrin_app_sub_C | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005905 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0006897 | GO:GO:0008150 | GO:GO:0008565 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 |
| GO:GO:0030117 | GO:GO:0030131 | GO:GO:0035615 | GO:GO:0072583 | InterPro:IPR011989 | InterPro:IPR012295 |
| EnsemblPlants:KXG40365 | ProteinID:KXG40365 | ProteinID:KXG40365.1 | PFAM:PF01602 | PFAM:PF02296 | PFAM:PF02883 |
| PIRSF:PIRSF037091 | PANTHER:PTHR22780 | PANTHER:PTHR22780:SF4 | SMART:SM00809 | EnsemblPlantsGene:SORBI_3001G534800 | SUPFAM:SSF48371 |
| SUPFAM:SSF49348 | SUPFAM:SSF55711 | InterPro:TBP_dom_sf | UniParc:UPI00081AB6DE | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:-:79822423..79833727
Molecular Weight (calculated)
116627.0 Da
IEP (calculated)
5.792
GRAVY (calculated)
-0.132
Length
1044 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALSGMRGLS VFISDIRNCH NKEQERLRVD KELGNIRTRF KNEKGLSPYE KKKYVWKMLY IYMLGYDVDF GHMETVSLIS APKYPEKQVG YIVTSCLLNE
0101: NNDFLRMVIN TVRNDIIGRN ETFQCLALTM VGNIGGKEFS ESLAPDVQKL LISSSCRPVV RKKAALCLLR LYRKNPDVVN IDGWADRMAQ LLDERDLGVL
0201: TSVMSLFVSL VSNNAEAYWN CLPKCVRILE RLARNQDIPQ EYTYYGIPSP WLQVKTMRAL QYFPTIEDPN ARRALFEVLQ RILMGTDVVK NVNKNNASHA
0301: VLFEALALVM HLDAEKEMMS QCVALLGKFI AVREPNIRYL GLENMTRMLL VTDVQDIIKR HQAQIITSLK DPDISIRRRA LDLLYGMCDV TNAKEIVEEL
0401: LQYLNTAEFA MREELSLKAA ILAEKFAPEL LWYVDVILQL IDKAGDFVSD DIWYRVVQFV TNNEDLQSYA AAKAREYLDK PALHETMVKV SAYLLGEYGH
0501: LLARRPGCSP KELFAIINDK LPTVSTSTVA ILLSTYAKIL MHTQPPDVGL QQQILTIFKK YESYIDVEIQ QRAVEYFELS RKGPALADVL AEMPKFPERE
0601: SALLKKAEDA EIDTAEQSAI KLRSQQQTSS ALVVADHPPA NGSAPPANHL TLVKMPSQTV SDTQESGVIY EEAPKPPVEA PKENGTPVEV ESRDTNITEI
0701: NNEIKAEPPS TSHSTSPADL LADLLGPLAI EGPPAVEQNP AQGLNANQSP VDDLALATLE DQSNSVQPTV NVEEKFHILC TKDSGVLYED PHIQIGLKAE
0801: WRAHHGRLIL FLGNKNTSAL TSVRALILPP GHLKMELSSV PDTIPPRAQV QVPLEVANLR ASRDVAVLDF SYTFGTLVDA KLRLPVVLNK FLQPITLTPE
0901: EFFPQWKALT VHSLKVQEVV KGVKPMPLSE MANLFMSLHL AVAPGLDNNP NNLVACTTFF SEATRAMLCL IRVETDPQDR TQLRLTVASG DQYLTFELKE
1001: FVKEHLIGIP RTQAAPPRAP VQPQLPAAAP ATYNDPGAML AGLL
0101: NNDFLRMVIN TVRNDIIGRN ETFQCLALTM VGNIGGKEFS ESLAPDVQKL LISSSCRPVV RKKAALCLLR LYRKNPDVVN IDGWADRMAQ LLDERDLGVL
0201: TSVMSLFVSL VSNNAEAYWN CLPKCVRILE RLARNQDIPQ EYTYYGIPSP WLQVKTMRAL QYFPTIEDPN ARRALFEVLQ RILMGTDVVK NVNKNNASHA
0301: VLFEALALVM HLDAEKEMMS QCVALLGKFI AVREPNIRYL GLENMTRMLL VTDVQDIIKR HQAQIITSLK DPDISIRRRA LDLLYGMCDV TNAKEIVEEL
0401: LQYLNTAEFA MREELSLKAA ILAEKFAPEL LWYVDVILQL IDKAGDFVSD DIWYRVVQFV TNNEDLQSYA AAKAREYLDK PALHETMVKV SAYLLGEYGH
0501: LLARRPGCSP KELFAIINDK LPTVSTSTVA ILLSTYAKIL MHTQPPDVGL QQQILTIFKK YESYIDVEIQ QRAVEYFELS RKGPALADVL AEMPKFPERE
0601: SALLKKAEDA EIDTAEQSAI KLRSQQQTSS ALVVADHPPA NGSAPPANHL TLVKMPSQTV SDTQESGVIY EEAPKPPVEA PKENGTPVEV ESRDTNITEI
0701: NNEIKAEPPS TSHSTSPADL LADLLGPLAI EGPPAVEQNP AQGLNANQSP VDDLALATLE DQSNSVQPTV NVEEKFHILC TKDSGVLYED PHIQIGLKAE
0801: WRAHHGRLIL FLGNKNTSAL TSVRALILPP GHLKMELSSV PDTIPPRAQV QVPLEVANLR ASRDVAVLDF SYTFGTLVDA KLRLPVVLNK FLQPITLTPE
0901: EFFPQWKALT VHSLKVQEVV KGVKPMPLSE MANLFMSLHL AVAPGLDNNP NNLVACTTFF SEATRAMLCL IRVETDPQDR TQLRLTVASG DQYLTFELKE
1001: FVKEHLIGIP RTQAAPPRAP VQPQLPAAAP ATYNDPGAML AGLL
0001: MTGMRGLSVF ISDVRNCQNK EAERLRVDKE LGNIRTCFKN EKVLTPYKKK KYVWKMLYIH MLGYDVDFGH MEAVSLISAP KYPEKQVGYI VTSCLLNENH
0101: DFLKLAINTV RNDIIGRNET FQCLALTLVG NIGGRDFAES LAPDVQKLLI SSSCRPLVRK KAALCLLRLF RKNPDAVNVD GWADRMAQLL DERDLGVLTS
0201: STSLLVALVS NNHEAYSSCL PKCVKILERL ARNQDVPQEY TYYGIPSPWL QVKAMRALQY FPTIEDPSTR KALFEVLQRI LMGTDVVKNV NKNNASHAVL
0301: FEALSLVMHL DAEKEMMSQC VALLGKFISV REPNIRYLGL ENMTRMLMVT DVQDIIKKHQ SQIITSLKDP DISIRRRALD LLYGMCDVSN AKDIVEELLQ
0401: YLSTAEFSMR EELSLKAAIL AEKFAPDLSW YVDVILQLID KAGDFVSDDI WFRVVQFVTN NEDLQPYAAS KAREYMDKIA IHETMVKVSA YILGEYGHLL
0501: ARQPGCSASE LFSILHEKLP TVSTPTIPIL LSTYAKLLMH AQPPDPELQK KVWAVFKKYE SCIDVEIQQR AVEYFELSKK GPAFMDVLAE MPKFPERQSS
0601: LIKKAENVED TADQSAIKLR AQQQPSNAIV LADPQPVNGA PPPLKVPILS GSTDPESVAR SLSHPNGTLS NIDPQTPSPD LLSDLLGPLA IEAPPGAVSY
0701: EQHGPVGAEG VPDEIDGSAI VPVEEQTNTV ELIGNIAERF HALCLKDSGV LYEDPHIQIG IKAEWRGHHG RLVLFMGNKN TSPLTSVQAL ILPPAHLRLD
0801: LSPVPDTIPP RAQVQSPLEV MNIRPSRDVA VLDFSYKFGT NVVSAKLRIP ATLNKFLQPL QLTSEEFFPQ WRAISGPPLK LQEVVRGVRP LALPEMANLF
0901: NSFHVTICPG LDPNPNNLVA STTFYSETTG AMLCLARIET DPADRTQLRL TVGSGDPTLT FELKEFIKEQ LITIPMGSRA LVPAAGPAPS PAVQPPSPAA
1001: LADDPGAMLA GLL
0101: DFLKLAINTV RNDIIGRNET FQCLALTLVG NIGGRDFAES LAPDVQKLLI SSSCRPLVRK KAALCLLRLF RKNPDAVNVD GWADRMAQLL DERDLGVLTS
0201: STSLLVALVS NNHEAYSSCL PKCVKILERL ARNQDVPQEY TYYGIPSPWL QVKAMRALQY FPTIEDPSTR KALFEVLQRI LMGTDVVKNV NKNNASHAVL
0301: FEALSLVMHL DAEKEMMSQC VALLGKFISV REPNIRYLGL ENMTRMLMVT DVQDIIKKHQ SQIITSLKDP DISIRRRALD LLYGMCDVSN AKDIVEELLQ
0401: YLSTAEFSMR EELSLKAAIL AEKFAPDLSW YVDVILQLID KAGDFVSDDI WFRVVQFVTN NEDLQPYAAS KAREYMDKIA IHETMVKVSA YILGEYGHLL
0501: ARQPGCSASE LFSILHEKLP TVSTPTIPIL LSTYAKLLMH AQPPDPELQK KVWAVFKKYE SCIDVEIQQR AVEYFELSKK GPAFMDVLAE MPKFPERQSS
0601: LIKKAENVED TADQSAIKLR AQQQPSNAIV LADPQPVNGA PPPLKVPILS GSTDPESVAR SLSHPNGTLS NIDPQTPSPD LLSDLLGPLA IEAPPGAVSY
0701: EQHGPVGAEG VPDEIDGSAI VPVEEQTNTV ELIGNIAERF HALCLKDSGV LYEDPHIQIG IKAEWRGHHG RLVLFMGNKN TSPLTSVQAL ILPPAHLRLD
0801: LSPVPDTIPP RAQVQSPLEV MNIRPSRDVA VLDFSYKFGT NVVSAKLRIP ATLNKFLQPL QLTSEEFFPQ WRAISGPPLK LQEVVRGVRP LALPEMANLF
0901: NSFHVTICPG LDPNPNNLVA STTFYSETTG AMLCLARIET DPADRTQLRL TVGSGDPTLT FELKEFIKEQ LITIPMGSRA LVPAAGPAPS PAVQPPSPAA
1001: LADDPGAMLA GLL
Arabidopsis Description
ALPHAC-ADAP-2 complex subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.