Factsheet for Bra037603.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY20344	Canola	cytosol	62.92	98.91
CDY20343	Canola	cytosol	30.28	98.4
CDY29719	Canola	cytosol	92.5	95.62
Solyc11g066760.1.1	Tomato	cytosol	41.81	90.79
Os03t0112101-00	Rice	plasma membrane	34.12	88.72
Bra002427.1-P	Field mustard	cytosol	87.57	88.18
GSMUA_Achr5P15260_001	Banana	cytosol	11.14	86.26
KRH26563	Soybean	endoplasmic reticulum	82.74	82.25
KRH22743	Soybean	cytosol, endoplasmic reticulum	82.74	82.25
VIT_06s0061g01170.t01	Wine grape	cytosol	81.95	81.87
Solyc06g074650.2.1	Tomato	plastid	80.37	80.14
GSMUA_Achr1P01770_001	Banana	cytosol	77.22	76.39
KXG40365	Sorghum	cytosol	76.33	74.14
TraesCS4B01G395700.3	Wheat	cytosol, unclear	74.16	72.24
TraesCS5A01G557300.1	Wheat	cytosol	74.06	72.07
Zm00001d048511_P008	Maize	cytosol	74.95	71.36
Zm00001d027333_P018	Maize	cytosol	75.15	71.35
HORVU4Hr1G089310.1	Barley	cytosol	72.49	69.21
Solyc11g066770.1.1	Tomato	cytosol	29.49	68.89
Os03t0112400-01	Rice	cytosol	9.86	65.36
GSMUA_Achr5P15250_001	Banana	cytosol	63.61	64.95
Bra024627.1-P	Field mustard	mitochondrion	21.99	25.57
Bra012393.1-P	Field mustard	mitochondrion	21.89	25.4
Bra031528.1-P	Field mustard	mitochondrion	5.23	24.31
Bra024739.1-P	Field mustard	cytosol	5.72	22.05
Bra023199.1-P	Field mustard	cytosol	17.16	18.55
Bra032266.1-P	Field mustard	nucleus	14.1	16.82
Bra022309.1-P	Field mustard	nucleus	14.1	16.71

Protein Annotations

Gene3D:1.25.10.10	Gene3D:2.60.40.1230	MapMan:22.1.3.1	Gene3D:3.30.310.10	InterPro:AP2_complex_asu	InterPro:ARM-like
InterPro:ARM-type_fold	EnsemblPlantsGene:Bra037603	EnsemblPlants:Bra037603.1	EnsemblPlants:Bra037603.1-P	InterPro:Clathrin/coatomer_adapt-like_N	InterPro:Clathrin_a-adaptin_app_sub_C
InterPro:Clathrin_a/b/g-adaptin_app_Ig	InterPro:Clathrin_app_Ig-like_sf	InterPro:Coatomer/calthrin_app_sub_C	GO:GO:0003674	GO:GO:0005215	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005905
GO:GO:0006810	GO:GO:0006886	GO:GO:0006897	GO:GO:0008150	GO:GO:0008565	GO:GO:0015031
GO:GO:0016020	GO:GO:0016192	GO:GO:0030117	GO:GO:0030131	GO:GO:0035615	GO:GO:0072583
InterPro:IPR011989	InterPro:IPR012295	UniProt:M4F940	PFAM:PF01602	PFAM:PF02296	PFAM:PF02883
PIRSF:PIRSF037091	PANTHER:PTHR22780	PANTHER:PTHR22780:SF4	SMART:SM00809	SUPFAM:SSF48371	SUPFAM:SSF49348
SUPFAM:SSF55711	InterPro:TBP_dom_sf	UniParc:UPI00025437B5	SEG:seg	:	:

Description

AT5G22780 (E=0.0) | adaptin family protein

Coordinates

chrA01:-:13159178..13166353

Molecular Weight (calculated)

113234.0 Da

IEP (calculated)

6.169

GRAVY (calculated)

-0.115

Length

1014 amino acids

Sequence
(BLAST)

0001: MSGMRGLSVF ISDIRNCQNK EAERLRVDKE LGNIRTCFKN DKGLTPYKKK KYVWKMLYIH MLGYDVDFGH MEAVSLISAP KYPEKQVGYI VTSCLLNENH
0101: DFLRLAINAV RNDIIGRNET YQCLALTLVG NIGGREFAES LAPDVQKLLI SSSCRPLVRK KAALCLLRLF RKNPDVVNAD GWADRMAQLL DERDLGVLTS
0201: SMSLLVSLVS NDYEGYSSCL PKCVKILERL ARNQDVPQEY TYYGIPSPWL QVKTMRALQY FPTIEDPSTR RSLFEVLQRI LMGTDVVKNV NKNNASHAVL
0301: FEALSLVMHL NAEKEMMSQC VALLGKFISV REPNIRYLGL ENMTRMLMIT DAQDIIKKHQ PQIITSLKDP DISIRRRALD LLYGMCDVSN AKGIVEELLQ
0401: YLSTAEFSMR EELSLKAAIL AEKFAPDLSW YVDVILQLID NAGDFVSDDI WFRVVQFVTN NEDLQPYAAS KVREYMDKIA IHETMVKVSA YILGEYGHLL
0501: ARRPGCSARE LFGILHEKLP TVSSPTIPLL LSTYAKLLMH AQPPDIELQK QIWNVFKKYE SSIDVEIQQR AVEYFELSKK GAALMDVLAE MPKFPERQSS
0601: LIKKVEDVED TADQSAIKLR AQQLPSNALV LADPQPVNGT PPPLKVPSIS GIKLDHESAS QTQSQPNGDL SKVQSQIPSA DLLGEMVDPL AIEAPPVDMG
0701: SHQRVYREED GIPDEVDGTA IVPIGDQANK VEPIGNITER FNALCLKDSG VLYEDPYIQI GVKAEWRGHH GRLVLFLGNK VTSPLTSVQA LILPPAHLKL
0801: ELSLVPDTIP PRAQVQCPLE VMNIRPSRDV AVLDFSYKFG TSMVSAKLRL PAVLNKFLQP LQLTSEEFFP QWRSLSGPPL KLQEVVRGVR PLSLPEMENL
0901: FNSFRVTICP GLDPNPNNLV ASTTFYSENT RPMLCLARIE TDPADRTQLR LTVASGDSTL TFELKEFIKE QLIAIPMGSR ALVPAVPVPA APLAQPPSPA
1001: VDANDPGAML AGLL

Best Arabidopsis Sequence Match ( AT5G22780.1 )
(BLAST)

0001: MTGMRGLSVF ISDVRNCQNK EAERLRVDKE LGNIRTCFKN EKVLTPYKKK KYVWKMLYIH MLGYDVDFGH MEAVSLISAP KYPEKQVGYI VTSCLLNENH
0101: DFLKLAINTV RNDIIGRNET FQCLALTLVG NIGGRDFAES LAPDVQKLLI SSSCRPLVRK KAALCLLRLF RKNPDAVNVD GWADRMAQLL DERDLGVLTS
0201: STSLLVALVS NNHEAYSSCL PKCVKILERL ARNQDVPQEY TYYGIPSPWL QVKAMRALQY FPTIEDPSTR KALFEVLQRI LMGTDVVKNV NKNNASHAVL
0301: FEALSLVMHL DAEKEMMSQC VALLGKFISV REPNIRYLGL ENMTRMLMVT DVQDIIKKHQ SQIITSLKDP DISIRRRALD LLYGMCDVSN AKDIVEELLQ
0401: YLSTAEFSMR EELSLKAAIL AEKFAPDLSW YVDVILQLID KAGDFVSDDI WFRVVQFVTN NEDLQPYAAS KAREYMDKIA IHETMVKVSA YILGEYGHLL
0501: ARQPGCSASE LFSILHEKLP TVSTPTIPIL LSTYAKLLMH AQPPDPELQK KVWAVFKKYE SCIDVEIQQR AVEYFELSKK GPAFMDVLAE MPKFPERQSS
0601: LIKKAENVED TADQSAIKLR AQQQPSNAIV LADPQPVNGA PPPLKVPILS GSTDPESVAR SLSHPNGTLS NIDPQTPSPD LLSDLLGPLA IEAPPGAVSY
0701: EQHGPVGAEG VPDEIDGSAI VPVEEQTNTV ELIGNIAERF HALCLKDSGV LYEDPHIQIG IKAEWRGHHG RLVLFMGNKN TSPLTSVQAL ILPPAHLRLD
0801: LSPVPDTIPP RAQVQSPLEV MNIRPSRDVA VLDFSYKFGT NVVSAKLRIP ATLNKFLQPL QLTSEEFFPQ WRAISGPPLK LQEVVRGVRP LALPEMANLF
0901: NSFHVTICPG LDPNPNNLVA STTFYSETTG AMLCLARIET DPADRTQLRL TVGSGDPTLT FELKEFIKEQ LITIPMGSRA LVPAAGPAPS PAVQPPSPAA
1001: LADDPGAMLA GLL

Arabidopsis Description

ALPHAC-ADAP-2 complex subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.