Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g066770.1.1 | Tomato | cytosol | 45.89 | 68.2 |
| Os03t0112400-01 | Rice | cytosol | 15.5 | 65.36 |
| CDY29719 | Canola | cytosol | 98.45 | 64.73 |
| Bra037603.1-P | Field mustard | cytosol | 98.91 | 62.92 |
| CDY26951 | Canola | cytosol | 83.57 | 53.47 |
| CDX92339 | Canola | cytosol | 83.41 | 53.43 |
| KRH26563 | Soybean | endoplasmic reticulum | 76.12 | 48.14 |
| KRH22743 | Soybean | cytosol, endoplasmic reticulum | 76.12 | 48.14 |
| VIT_06s0061g01170.t01 | Wine grape | cytosol | 75.04 | 47.68 |
| Solyc06g074650.2.1 | Tomato | plastid | 72.71 | 46.12 |
| GSMUA_Achr1P01770_001 | Banana | cytosol | 69.61 | 43.8 |
| GSMUA_Achr5P15250_001 | Banana | cytosol | 66.51 | 43.2 |
| KXG40365 | Sorghum | cytosol | 67.91 | 41.95 |
| TraesCS4B01G395700.3 | Wheat | cytosol, unclear | 64.81 | 40.15 |
| TraesCS5A01G557300.1 | Wheat | cytosol | 64.65 | 40.02 |
| Zm00001d048511_P008 | Maize | cytosol | 66.05 | 40.0 |
| Zm00001d027333_P018 | Maize | cytosol | 66.2 | 39.98 |
| HORVU4Hr1G089310.1 | Barley | cytosol | 62.17 | 37.76 |
| Solyc11g066760.1.1 | Tomato | cytosol | 18.14 | 25.05 |
| CDY24514 | Canola | cytosol | 5.89 | 18.81 |
| CDY33619 | Canola | mitochondrion | 10.7 | 15.16 |
| CDY59088 | Canola | mitochondrion | 16.28 | 12.04 |
| CDY28466 | Canola | mitochondrion | 16.12 | 11.9 |
| CDY25807 | Canola | mitochondrion | 15.97 | 11.77 |
| CDY47649 | Canola | mitochondrion | 15.81 | 11.7 |
| CDY42099 | Canola | cytosol | 12.4 | 8.47 |
| CDX84997 | Canola | cytosol | 10.54 | 7.82 |
| CDY70074 | Canola | cytosol | 7.6 | 7.75 |
| CDX92225 | Canola | cytosol, nucleus, plastid | 9.3 | 7.01 |
| CDY68338 | Canola | nucleus | 9.15 | 6.94 |
| CDY04318 | Canola | cytosol, nucleus, plastid | 8.53 | 6.85 |
| CDY24454 | Canola | cytosol | 8.99 | 6.79 |
| Os03t0112101-00 | Rice | plasma membrane | 2.33 | 3.85 |
| CDY20343 | Canola | cytosol | 1.4 | 2.88 |
| CDX91727 | Canola | mitochondrion | 0.31 | 1.67 |
| GSMUA_Achr5P15260_001 | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:2.60.40.1230 | Gene3D:3.30.310.10 | MapMan:35.1 | GO:A0A078G4M9 | UniProt:A0A078G4M9 |
| InterPro:ARM-like | InterPro:ARM-type_fold | EnsemblPlants:CDY20344 | ProteinID:CDY20344 | ProteinID:CDY20344.1 | InterPro:Clathrin/coatomer_adapt-like_N |
| InterPro:Clathrin_a-adaptin_app_sub_C | InterPro:Clathrin_a/b/g-adaptin_app_Ig | InterPro:Clathrin_app_Ig-like_sf | InterPro:Coatomer/calthrin_app_sub_C | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0008150 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030131 |
| EnsemblPlantsGene:GSBRNA2T00012318001 | InterPro:IPR011989 | InterPro:IPR012295 | PFAM:PF01602 | PFAM:PF02296 | PFAM:PF02883 |
| PANTHER:PTHR22780 | PANTHER:PTHR22780:SF4 | SMART:SM00809 | SUPFAM:SSF48371 | SUPFAM:SSF49348 | SUPFAM:SSF55711 |
| InterPro:TBP_dom_sf | UniParc:UPI0004EECA0B | SEG:seg | : | : | : |
Description
BnaC01g23960DBnaC01g23960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4M9]
Coordinates
chrLK032106:+:339020..344959
Molecular Weight (calculated)
71114.9 Da
IEP (calculated)
4.765
GRAVY (calculated)
-0.074
Length
645 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTSAWTRAL DLLYGMCDVS NAKGIVEELL QYLSTAEFSM REELSLKAAI LAEKFAPDLS WYVDVILQLI DNAGDFVSDD IWFRVVQFVT NNEDLQPYAA
101: SKVREYMDKI AIHETMVKVS AYILGEYGHL LARRPGCSAR ELFGILHEKL PTVSSPTIPL LLSTYAKLLM HAQPPDIELQ KQIWNVFKKY ESSIDVEIQQ
201: RAVEYFELSK KGAALMDVLA EMPKFPERQS SLIKKVEDVE DTADQSAIKL RAQQLPSNAL VLADPQPVNG TPPPLKVPSI SGIKLDHESA SQTQSQPNGD
301: LSKAQSQIPS ADLVGEMVDS LAIEAPPVDM GSHQRVYREE DGIPDEVDGT AIVPIGDQAN KVEPIGNITE RFNALCLKDS GVLYEDPYIQ IGVKAEWRGH
401: HGRLVLFLGN KVTSPLTSVQ ALILPPAHLK LELSLVPDTI PPRAQVQCPL EVMNIRPSRD VAVLDFSYKF GTSMVSAKLR LPAVLNKFLQ PLQLTSEEFF
501: PQWRSLSGPP LKLQEVVRGV RPLSLPEMEN LFNSFRVTIC PGLDPNPNNL VASTTFYSEN TRPMLCLARI ETDPADRTQL RLTVASGDST LTFELKEFIK
601: EQLIAIPMGS RALVPAVPVP AAPLAQPPSP AVDANDPGAM LAGLL
101: SKVREYMDKI AIHETMVKVS AYILGEYGHL LARRPGCSAR ELFGILHEKL PTVSSPTIPL LLSTYAKLLM HAQPPDIELQ KQIWNVFKKY ESSIDVEIQQ
201: RAVEYFELSK KGAALMDVLA EMPKFPERQS SLIKKVEDVE DTADQSAIKL RAQQLPSNAL VLADPQPVNG TPPPLKVPSI SGIKLDHESA SQTQSQPNGD
301: LSKAQSQIPS ADLVGEMVDS LAIEAPPVDM GSHQRVYREE DGIPDEVDGT AIVPIGDQAN KVEPIGNITE RFNALCLKDS GVLYEDPYIQ IGVKAEWRGH
401: HGRLVLFLGN KVTSPLTSVQ ALILPPAHLK LELSLVPDTI PPRAQVQCPL EVMNIRPSRD VAVLDFSYKF GTSMVSAKLR LPAVLNKFLQ PLQLTSEEFF
501: PQWRSLSGPP LKLQEVVRGV RPLSLPEMEN LFNSFRVTIC PGLDPNPNNL VASTTFYSEN TRPMLCLARI ETDPADRTQL RLTVASGDST LTFELKEFIK
601: EQLIAIPMGS RALVPAVPVP AAPLAQPPSP AVDANDPGAM LAGLL
0001: MTGMRGLSVF ISDVRNCQNK EAERLRVDKE LGNIRTCFKN EKVLTPYKKK KYVWKMLYIH MLGYDVDFGH MEAVSLISAP KYPEKQVGYI VTSCLLNENH
0101: DFLKLAINTV RNDIIGRNET FQCLALTLVG NIGGRDFAES LAPDVQKLLI SSSCRPLVRK KAALCLLRLF RKNPDAVNVD GWADRMAQLL DERDLGVLTS
0201: STSLLVALVS NNHEAYSSCL PKCVKILERL ARNQDVPQEY TYYGIPSPWL QVKAMRALQY FPTIEDPSTR KALFEVLQRI LMGTDVVKNV NKNNASHAVL
0301: FEALSLVMHL DAEKEMMSQC VALLGKFISV REPNIRYLGL ENMTRMLMVT DVQDIIKKHQ SQIITSLKDP DISIRRRALD LLYGMCDVSN AKDIVEELLQ
0401: YLSTAEFSMR EELSLKAAIL AEKFAPDLSW YVDVILQLID KAGDFVSDDI WFRVVQFVTN NEDLQPYAAS KAREYMDKIA IHETMVKVSA YILGEYGHLL
0501: ARQPGCSASE LFSILHEKLP TVSTPTIPIL LSTYAKLLMH AQPPDPELQK KVWAVFKKYE SCIDVEIQQR AVEYFELSKK GPAFMDVLAE MPKFPERQSS
0601: LIKKAENVED TADQSAIKLR AQQQPSNAIV LADPQPVNGA PPPLKVPILS GSTDPESVAR SLSHPNGTLS NIDPQTPSPD LLSDLLGPLA IEAPPGAVSY
0701: EQHGPVGAEG VPDEIDGSAI VPVEEQTNTV ELIGNIAERF HALCLKDSGV LYEDPHIQIG IKAEWRGHHG RLVLFMGNKN TSPLTSVQAL ILPPAHLRLD
0801: LSPVPDTIPP RAQVQSPLEV MNIRPSRDVA VLDFSYKFGT NVVSAKLRIP ATLNKFLQPL QLTSEEFFPQ WRAISGPPLK LQEVVRGVRP LALPEMANLF
0901: NSFHVTICPG LDPNPNNLVA STTFYSETTG AMLCLARIET DPADRTQLRL TVGSGDPTLT FELKEFIKEQ LITIPMGSRA LVPAAGPAPS PAVQPPSPAA
1001: LADDPGAMLA GLL
0101: DFLKLAINTV RNDIIGRNET FQCLALTLVG NIGGRDFAES LAPDVQKLLI SSSCRPLVRK KAALCLLRLF RKNPDAVNVD GWADRMAQLL DERDLGVLTS
0201: STSLLVALVS NNHEAYSSCL PKCVKILERL ARNQDVPQEY TYYGIPSPWL QVKAMRALQY FPTIEDPSTR KALFEVLQRI LMGTDVVKNV NKNNASHAVL
0301: FEALSLVMHL DAEKEMMSQC VALLGKFISV REPNIRYLGL ENMTRMLMVT DVQDIIKKHQ SQIITSLKDP DISIRRRALD LLYGMCDVSN AKDIVEELLQ
0401: YLSTAEFSMR EELSLKAAIL AEKFAPDLSW YVDVILQLID KAGDFVSDDI WFRVVQFVTN NEDLQPYAAS KAREYMDKIA IHETMVKVSA YILGEYGHLL
0501: ARQPGCSASE LFSILHEKLP TVSTPTIPIL LSTYAKLLMH AQPPDPELQK KVWAVFKKYE SCIDVEIQQR AVEYFELSKK GPAFMDVLAE MPKFPERQSS
0601: LIKKAENVED TADQSAIKLR AQQQPSNAIV LADPQPVNGA PPPLKVPILS GSTDPESVAR SLSHPNGTLS NIDPQTPSPD LLSDLLGPLA IEAPPGAVSY
0701: EQHGPVGAEG VPDEIDGSAI VPVEEQTNTV ELIGNIAERF HALCLKDSGV LYEDPHIQIG IKAEWRGHHG RLVLFMGNKN TSPLTSVQAL ILPPAHLRLD
0801: LSPVPDTIPP RAQVQSPLEV MNIRPSRDVA VLDFSYKFGT NVVSAKLRIP ATLNKFLQPL QLTSEEFFPQ WRAISGPPLK LQEVVRGVRP LALPEMANLF
0901: NSFHVTICPG LDPNPNNLVA STTFYSETTG AMLCLARIET DPADRTQLRL TVGSGDPTLT FELKEFIKEQ LITIPMGSRA LVPAAGPAPS PAVQPPSPAA
1001: LADDPGAMLA GLL
Arabidopsis Description
ALPHAC-ADAP-2 complex subunit alpha-2 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPK4]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.