CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032266.1-P	Field mustard	nucleus	99.41	99.41
CDY04318	Canola	cytosol, nucleus, plastid	88.82	94.02
AT1G48760.2	Thale cress	cytosol	84.12	82.28
CDX92225	Canola	cytosol, nucleus, plastid	72.82	72.31
CDY24454	Canola	cytosol	71.65	71.31
VIT_17s0000g03430.t01	Wine grape	cytosol	58.94	52.24
KRH41691	Soybean	cytosol	55.76	51.75
KRH60392	Soybean	cytosol	58.82	51.18
PGSC0003DMT400014395	Potato	cytosol	55.53	48.66
Solyc03g119270.1.1	Tomato	nucleus	55.53	48.66
GSMUA_Achr4P06740_001	Banana	cytosol, plastid	35.41	42.16
EES14423	Sorghum	cytosol	13.18	40.88
EER88616	Sorghum	cytosol	24.35	40.59
GSMUA_Achr4P13750_001	Banana	nucleus, plastid	37.88	40.4
Os01t0512200-01	Rice	plasma membrane	39.88	35.87
TraesCS1A01G211900.1	Wheat	plastid	38.82	35.79
Zm00001d041626_P001	Maize	plastid	39.53	35.71
EES17171	Sorghum	plastid	39.65	35.55
TraesCS1D01G215000.1	Wheat	cytosol, plastid	38.59	35.54
Zm00001d023820_P001	Maize	mitochondrion	38.71	35.53
TraesCS1B01G225600.1	Wheat	plastid	38.47	35.43
KXG20021	Sorghum	cytosol	29.06	35.29
HORVU1Hr1G054180.2	Barley	cytosol, plastid	38.94	34.92
CDY20343	Canola	cytosol	8.71	23.72
CDX91727	Canola	mitochondrion	3.18	22.5
CDY70074	Canola	cytosol	14.0	18.83
CDY24514	Canola	cytosol	4.24	17.82
CDY28466	Canola	mitochondrion	17.18	16.7
CDY25807	Canola	mitochondrion	17.18	16.69
CDY59088	Canola	mitochondrion	16.94	16.51
CDY47649	Canola	mitochondrion	16.94	16.51
CDX84997	Canola	cytosol	15.76	15.4
CDY42099	Canola	cytosol	16.0	14.41
CDX92339	Canola	cytosol	16.47	13.9
CDY26951	Canola	cytosol	16.47	13.89
CDY29719	Canola	cytosol	15.65	13.56
CDY33619	Canola	mitochondrion	6.94	12.97
CDY20344	Canola	cytosol	6.94	9.15

Protein Annotations

Gene3D:1.25.10.10	MapMan:22.1.5.1	GO:A0A078JLH5	UniProt:A0A078JLH5	InterPro:AP3_complex_dsu	InterPro:ARM-like
InterPro:ARM-type_fold	EnsemblPlants:CDY68338	ProteinID:CDY68338	ProteinID:CDY68338.1	InterPro:Clathrin/coatomer_adapt-like_N	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005794
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192
GO:GO:0030117	GO:GO:0030123	EnsemblPlantsGene:GSBRNA2T00073481001	InterPro:IPR011989	PFAM:PF01602	PIRSF:PIRSF037092
PANTHER:PTHR22781	SUPFAM:SSF48371	UniParc:UPI0004EE49C6	SEG:seg	:	:

Description

BnaAnng26940DAP-3 complex subunit delta [Source:UniProtKB/TrEMBL;Acc:A0A078JLH5]

Coordinates

chrLK037191:-:3415..5967

Molecular Weight (calculated)

95227.4 Da

IEP (calculated)

6.730

GRAVY (calculated)

-0.224

Length

850 amino acids

Sequence
(BLAST)

001: MDNLFQRSLE DLIKGFRLQL LGDSSFISRA LEEIRREIKA TDLSTKSTAL HKLSYLAAIH GVDMSWAAFH ALEVVSSSRF HHKRIGYQAI TQSFHDQTSV
101: LLLITNQLRK DLNSVNEYEV SLALECLSRI GTRDLARDLS PEVFTLLGSS KSFVRKKATG VVLRVFDKYP DAVKVCFKRL VENLETSDPQ ILSAVVGVFC
201: ELASKDPTSC LPLAPEFFKI LVESRNNWVL IKLLKIFSKL ASVEPRLGRK VAEPICEHMK RTVAKSLVFE CVRTVVSSLS DHEAAVKLAV AKIREFLVED
301: DPNLKYLGLH ALSIAAPKHL WAVLENKEAV VKALSDDDPN VKLEALHLLM AMVTEDNVSE ISRILMNYAL KSDPLFCNEI IISVLSVCSR NAYEIIVDFD
401: WYVSLLGEMA RIPHCQRGEE IEHQLIDIGM RVRDARPQLV RVSWALLIDP ALLGNMFLHP ILSAASWVSG EYVEFAKNPY ELVEALVQPR TDLLPPYIRA
501: IYIHSVFKVL VFCLGSYFSA QESSSGSSST VYESILNLVN VIEIGVWPLS GAYDVEVQER AKNVLGFIGM AKQDIAKKVN LQDNEAEACR VTAFMEDAFS
601: EELGPISANA REKVCVPDGL ELEENLGDLE EICGKFLKPV ESDSVSCTDK ISFSVSKLRI RDQQEASSST SLPPKESSSL LAEHRKRHGM YYLTSKKNDP
701: DSNGTPNDYP PANDLASEIL LDPLDPKRKA KHRKSRPVVV KLDEGGESRI TTSQAKTKQE SVTDDESLSR DIQSALLVNK KGKEREKCEG NSNLVVVQEE
801: ETSRIEKPQN SEKKKKKKKN GERTSRKHRS RRRSEVASSS EQVEIPDLLL

Best Arabidopsis Sequence Match ( AT1G48760.1 )
(BLAST)

001: MSSSSTSIMD NLFQRSLEDL IKGFRLQLLG ESNFISRAVE EIRREIKATD LSTKSTALHK LSYLAALHGV DMSWAAFHAV EVVSSSRFQH KRIGYQAITQ
101: SFNDQTSVML LITNQVRKDL NSANEYEVSL ALECLSRIGT HDLARDLTPE VFTLLGSSKS FVKKKAIGVV LRVFEKYHDA VKVCFKRLVE NLETSDPQIL
201: SAVVGVFCEL ATKDPQSCLP LAPEFYKVLV DSRNNWVLIK VLKIFAKLAL IEPRLGKKVA EPICEHMRRT VAKSLVFECV RTVVSSLSDN EAAVKLAVAK
301: IREFLVEDDP NLKYLGLNAL SIVAPKHLWA VLENKEVVVK AMSDEDPNVK LEALHLLMAM VNEDNVSEIS RILMNYALKS DPLFCNEIIF SVLSACSRNA
401: YEIIVDFDWY LSLLGEMARI PHCQRGEDIE HQLIDIGMRV RDARPQLVRV SWALLIDPAL LGNLFLHPIL SAAAWVSGEY VEFSKNPYET VEALLQPRTD
501: LLPPSIKAIY IHSAFKVLVF CLGSYFSSQE PTSSSLAQES SSGSLLVNVF THESILSLVN VIELGLGPLS GYHDVEVQER AKNVLGYISV IKQEIAEQLN
601: LQDNETEASR VTAFMEDVFS EEFGPISATA QEKVCVPDGL ELKENLGDLE EICGEHLKPV ESDSVSYTDK ISFSVSKLRI RDQQEATSSS SPPHEASSLL
701: AEHRKRHGMY YLTSQKEDQD SNGTSSDYPL ANELANEISQ DSFNPKRKPN QSKPRPVVVK LDDGDESRIT PQAKTNIQTA NDDESLSRAI QSALLVKNKG
801: KEKDRYEGNP NSGQQEKEES SRIENHQNSE KKKKKKKKKK GEGSSKHKSR RQNEVASASE QVIIPDFLL

Arabidopsis Description

DELTA-ADRAP-3 complex subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C744]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.