Factsheet for Zm00001d023820_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 3
plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES17171	Sorghum	plastid	90.39	88.29
EES14423	Sorghum	cytosol	26.03	87.96
Zm00001d041626_P001	Maize	plastid	89.2	87.78
EER88616	Sorghum	cytosol	47.08	85.49
KXG20021	Sorghum	cytosol	61.56	81.43
Os01t0512200-01	Rice	plasma membrane	74.84	73.33
TraesCS1D01G215000.1	Wheat	cytosol, plastid	71.17	71.4
TraesCS1B01G225600.1	Wheat	plastid	71.06	71.29
TraesCS1A01G211900.1	Wheat	plastid	70.41	70.72
HORVU1Hr1G054180.2	Barley	cytosol, plastid	72.14	70.46
GSMUA_Achr4P06740_001	Banana	cytosol, plastid	40.6	52.66
GSMUA_Achr4P13750_001	Banana	nucleus, plastid	45.03	52.32
CDY04318	Canola	cytosol, nucleus, plastid	35.1	40.47
KRH41691	Soybean	cytosol	39.52	39.96
Bra022309.1-P	Field mustard	nucleus	36.93	39.95
CDX92225	Canola	cytosol, nucleus, plastid	36.93	39.95
PGSC0003DMT400014395	Potato	cytosol	41.04	39.18
Solyc03g119270.1.1	Tomato	nucleus	41.04	39.18
CDY24454	Canola	cytosol	36.07	39.11
VIT_17s0000g03430.t01	Wine grape	cytosol	40.28	38.89
KRH60392	Soybean	cytosol	40.93	38.79
CDY68338	Canola	nucleus	35.53	38.71
Bra032266.1-P	Field mustard	nucleus	35.31	38.47
AT1G48760.2	Thale cress	cytosol	35.53	37.86
Zm00001d025314_P001	Maize	cytosol	3.78	21.74
Zm00001d045195_P002	Maize	cytosol	14.79	15.8
Zm00001d036305_P003	Maize	mitochondrion	15.01	15.34
Zm00001d051998_P003	Maize	cytosol	14.79	15.21
Zm00001d042370_P003	Maize	cytosol	15.66	14.93
Zm00001d012061_P005	Maize	cytosol	15.44	14.67
Zm00001d027333_P018	Maize	cytosol	13.93	12.08
Zm00001d048511_P008	Maize	cytosol	13.61	11.83

Protein Annotations

MapMan:22.1.5.1	UniProt:A0A1D6IW44	InterPro:AP3_complex_dsu	ProteinID:AQK40165.1	InterPro:ARM-type_fold	InterPro:Clathrin/coatomer_adapt-like_N
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0015031	GO:GO:0016020	GO:GO:0016192
GO:GO:0030117	GO:GO:0030123	PFAM:PF01602	PANTHER:PTHR22781	SUPFAM:SSF48371	UniParc:UPI0008441AA2
EnsemblPlantsGene:Zm00001d023820	EnsemblPlants:Zm00001d023820_P001	EnsemblPlants:Zm00001d023820_T001	SEG:seg	:	:

Description

AP-3 complex subunit delta

Coordinates

chr10:-:23416496..23420812

Molecular Weight (calculated)

100214.0 Da

IEP (calculated)

6.854

GRAVY (calculated)

-0.057

Length

926 amino acids

Sequence
(BLAST)

001: MHAFRRSLND LVKFLRADPS STGEAAAVAR ALSEIHREIR APDAATKSVA LQKLTYLSSL HFAPIASHPL AFLAIELLAS PHLPHKRLAY LAASLSLHPV
101: SLSLLPLATH QLHKDLSPSA GVHHHVSALA LQLLASPAAA AAPDLPVHLA QDLVPHLARG CPRAIAAAAR VIAASPSAAV PVLFKPLAAC LASPDPRAST
201: AAVAAFCDLS APPADATPFL PLAPDLYNLL TTSRSNWALI KVLKLFARLA PLESRLAARI VDPVCQLLTR SAAMSLTFEC IRTVLTALPA HDAAVRLAIG
301: KAMEFIAAAD DSNLRYLGLL ALGMLGPAYA STVNDCREAI AKSLGDADTN IRQEALRLIM GMVNENNIMD IAALLISHVA KSDPEFANDI LGAVLAACGH
401: NVYEMVVDFD WYVSLLAHMA RTLHCAQGDE IGRQLVDVGL RVQDARPELV RSARTLLIDP ALLGNHFLFP VLSAAAWISG EYVDLTKDPV ELVEALLQPR
501: TSLLPISVRA VYIHAVFKVI TWCFSAYIGR LGDSDLAMDV MFDRLAADET VNLESNAALG SGDEQDIGAS TVQKDPFSHE SILYMINLIQ TTVGPLINCN
601: EVEVQERAHN LIGFVHLVRE IQGLNKRKVA DGDKSSRLKE LVKTMRAVFC QELGPVYVNA QMKVSPPDGL ILNENLVELA GMVSEDDTTP STSIFFYPRS
701: RHSVDTRDEP AVSIGLSSLS EHRKRHGLFY LQTGKAEDEP NDYPQANDSL PSSSNNSAND DKWKTAERVF AGKKSTATKT RPKVVKLDTE DFLSSMMPSA
801: IVPKEDPLSG ALRDVLLGSD AKALSSQKAS DMNLEVMLNK ANSNESSSQQ IENLGSHPAS HSRTSKQQNH DKEKVTDRPE SDGKEPRKHR SSGRSGHRQG
901: KNKHREKSSA QPDIVPQTPV IQDFLL

Best Arabidopsis Sequence Match ( AT1G48760.1 )
(BLAST)

001: MSSSSTSIMD NLFQRSLEDL IKGFRLQLLG ESNFISRAVE EIRREIKATD LSTKSTALHK LSYLAALHGV DMSWAAFHAV EVVSSSRFQH KRIGYQAITQ
101: SFNDQTSVML LITNQVRKDL NSANEYEVSL ALECLSRIGT HDLARDLTPE VFTLLGSSKS FVKKKAIGVV LRVFEKYHDA VKVCFKRLVE NLETSDPQIL
201: SAVVGVFCEL ATKDPQSCLP LAPEFYKVLV DSRNNWVLIK VLKIFAKLAL IEPRLGKKVA EPICEHMRRT VAKSLVFECV RTVVSSLSDN EAAVKLAVAK
301: IREFLVEDDP NLKYLGLNAL SIVAPKHLWA VLENKEVVVK AMSDEDPNVK LEALHLLMAM VNEDNVSEIS RILMNYALKS DPLFCNEIIF SVLSACSRNA
401: YEIIVDFDWY LSLLGEMARI PHCQRGEDIE HQLIDIGMRV RDARPQLVRV SWALLIDPAL LGNLFLHPIL SAAAWVSGEY VEFSKNPYET VEALLQPRTD
501: LLPPSIKAIY IHSAFKVLVF CLGSYFSSQE PTSSSLAQES SSGSLLVNVF THESILSLVN VIELGLGPLS GYHDVEVQER AKNVLGYISV IKQEIAEQLN
601: LQDNETEASR VTAFMEDVFS EEFGPISATA QEKVCVPDGL ELKENLGDLE EICGEHLKPV ESDSVSYTDK ISFSVSKLRI RDQQEATSSS SPPHEASSLL
701: AEHRKRHGMY YLTSQKEDQD SNGTSSDYPL ANELANEISQ DSFNPKRKPN QSKPRPVVVK LDDGDESRIT PQAKTNIQTA NDDESLSRAI QSALLVKNKG
801: KEKDRYEGNP NSGQQEKEES SRIENHQNSE KKKKKKKKKK GEGSSKHKSR RQNEVASASE QVIIPDFLL

Arabidopsis Description

DELTA-ADRAP-3 complex subunit delta [Source:UniProtKB/Swiss-Prot;Acc:Q9C744]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.