Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d025314_P001 | Maize | cytosol | 15.76 | 95.03 |
| EES04102 | Sorghum | cytosol | 93.51 | 93.7 |
| Zm00001d012061_P005 | Maize | cytosol | 90.32 | 89.95 |
| Os01t0916200-02 | Rice | plasma membrane | 74.56 | 85.99 |
| TraesCS3D01G417200.1 | Wheat | cytosol | 83.11 | 84.68 |
| TraesCS3B01G457300.1 | Wheat | cytosol, nucleus, plastid | 83.11 | 84.68 |
| HORVU3Hr1G093320.4 | Barley | cytosol, mitochondrion, nucleus | 82.9 | 83.59 |
| Bra024739.1-P | Field mustard | cytosol | 21.73 | 80.23 |
| TraesCS3A01G421500.1 | Wheat | golgi | 83.11 | 78.05 |
| GSMUA_Achr8P08830_001 | Banana | cytosol | 64.37 | 75.85 |
| CDY70074 | Canola | cytosol | 49.33 | 75.79 |
| GSMUA_Achr11P... | Banana | cytosol | 67.77 | 70.68 |
| Bra023199.1-P | Field mustard | cytosol | 64.57 | 66.84 |
| AT1G31730.1 | Thale cress | cytosol | 64.26 | 66.52 |
| VIT_02s0087g00690.t01 | Wine grape | nucleus | 65.29 | 65.9 |
| CDY42099 | Canola | cytosol | 63.65 | 65.47 |
| KRH07246 | Soybean | nucleus | 64.57 | 63.91 |
| CDX84997 | Canola | cytosol | 57.16 | 63.79 |
| KRH07767 | Soybean | nucleus | 64.26 | 63.61 |
| Solyc08g075310.2.1 | Tomato | cytosol | 62.51 | 62.71 |
| KRH76456 | Soybean | nucleus | 61.9 | 62.22 |
| KRH39774 | Soybean | nucleus | 61.48 | 58.07 |
| PGSC0003DMT400004931 | Potato | nucleus | 19.05 | 44.47 |
| Zm00001d045195_P002 | Maize | cytosol | 16.37 | 18.34 |
| Zm00001d036305_P003 | Maize | mitochondrion | 16.79 | 17.99 |
| Zm00001d051998_P003 | Maize | cytosol | 16.68 | 17.98 |
| Zm00001d048511_P008 | Maize | cytosol | 17.3 | 15.77 |
| Zm00001d023820_P001 | Maize | mitochondrion | 14.93 | 15.66 |
| Zm00001d027333_P018 | Maize | cytosol | 17.2 | 15.64 |
| Zm00001d041626_P001 | Maize | plastid | 15.04 | 15.52 |
Protein Annotations
| Gene3D:1.25.10.10 | EntrezGene:100383591 | MapMan:22.5.2.2.1 | UniProt:A0A1D6N3A1 | InterPro:AP4_complex_esu | InterPro:ARM-like |
| InterPro:ARM-type_fold | InterPro:Clathrin/coatomer_adapt-like_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005794 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030124 | InterPro:IPR011989 |
| ProteinID:ONM35186.1 | PFAM:PF01602 | PIRSF:PIRSF037097 | PANTHER:PTHR22780 | PANTHER:PTHR22780:SF13 | SUPFAM:SSF48371 |
| UniParc:UPI000844FC59 | EnsemblPlantsGene:Zm00001d042370 | EnsemblPlants:Zm00001d042370_P003 | EnsemblPlants:Zm00001d042370_T003 | SEG:seg | : |
Description
AP-4 complex subunit epsilon
Coordinates
chr3:+:163507252..163516253
Molecular Weight (calculated)
105650.0 Da
IEP (calculated)
5.497
GRAVY (calculated)
-0.220
Length
971 amino acids
Sequence
(BLAST)
(BLAST)
001: MEQLRTIGRE LAMGSQGGWG QSKEFLDLVK SIGEARSKAE EDRIIARELE HLKRRLADPD VPRRKMKELL LRLVYAEMLG HDASFGHIHA VKMTHDESLP
101: LKRTGYLAVA LFLDERHDLV ILVVNTIQKD LRSDNYLVVC AALTAACRLI GEEAIPAVLP QVVELLAHPK EAVRKKAVMA LHRFYQRSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLYD LILEEPNSYK DLVIKLLKIL AVLGSGDKQA SGHMYTVLGD IFRKGDTASN IGNAILYECI CCISFIFPNP KMLEAAAETT
301: SKFLKSDSHN LKYMGIDALG RLIKINPDIA EEHQLAVIDC LEDPDDTLKR KTFELLYKMT KSTNVEVIVD RMIEYMINIT DHHYKTEIAS RCVELAEQFA
401: PSNQWFIQTM NKVFEHAGDL VNIRVAHNLM RLIAEGFGEE DEGADSQLRS SAVDSYLRIV GEPKLPSSFL QVVVFLVLSI PDYSFGILYV DSFHVQIICW
501: VLGEYGTADG KYSASYIIGK LCDVAEAHLT DDTVKAYAIS AILKTFAFEI TLGRKIDLLP ECQTLVDELS ASHSTDLQQR AYELQALLGL DKTAVESVMP
601: ADASCEDIEL GKTNRKVDRS LSFLNSYVQQ ALENGASPYI PESERSGVIS VGSYRSQEQQ ETSAHTLRFE AYEMPKPSLP LATSQTSMST PPTDLVPVPE
701: AGYYKEDNQT SMSQPPSDAI SGEFGVKLRL DGVQKKWGRP TYSSSTPSSS ISSQPTPNGA SHSDGGGSSS QPRESSYGSK RQQGTEVSAE KQRLAASLFG
801: SAAAKADRKA QASRKTAKDS PSTEKVATTN VTAQPVKEQV IPAAPPPDLL DLGDEPVSSS PPSADPFSQL EGLLGPASAA PVLSGTPATS TSKAPGLLSI
901: FSDDVPTGVT SVSTDPTLGD VNSMGSRKGA AAVASMKGPS LQDALQKDAA ARQVGVTPTV NNPNLFKDLL G
101: LKRTGYLAVA LFLDERHDLV ILVVNTIQKD LRSDNYLVVC AALTAACRLI GEEAIPAVLP QVVELLAHPK EAVRKKAVMA LHRFYQRSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLYD LILEEPNSYK DLVIKLLKIL AVLGSGDKQA SGHMYTVLGD IFRKGDTASN IGNAILYECI CCISFIFPNP KMLEAAAETT
301: SKFLKSDSHN LKYMGIDALG RLIKINPDIA EEHQLAVIDC LEDPDDTLKR KTFELLYKMT KSTNVEVIVD RMIEYMINIT DHHYKTEIAS RCVELAEQFA
401: PSNQWFIQTM NKVFEHAGDL VNIRVAHNLM RLIAEGFGEE DEGADSQLRS SAVDSYLRIV GEPKLPSSFL QVVVFLVLSI PDYSFGILYV DSFHVQIICW
501: VLGEYGTADG KYSASYIIGK LCDVAEAHLT DDTVKAYAIS AILKTFAFEI TLGRKIDLLP ECQTLVDELS ASHSTDLQQR AYELQALLGL DKTAVESVMP
601: ADASCEDIEL GKTNRKVDRS LSFLNSYVQQ ALENGASPYI PESERSGVIS VGSYRSQEQQ ETSAHTLRFE AYEMPKPSLP LATSQTSMST PPTDLVPVPE
701: AGYYKEDNQT SMSQPPSDAI SGEFGVKLRL DGVQKKWGRP TYSSSTPSSS ISSQPTPNGA SHSDGGGSSS QPRESSYGSK RQQGTEVSAE KQRLAASLFG
801: SAAAKADRKA QASRKTAKDS PSTEKVATTN VTAQPVKEQV IPAAPPPDLL DLGDEPVSSS PPSADPFSQL EGLLGPASAA PVLSGTPATS TSKAPGLLSI
901: FSDDVPTGVT SVSTDPTLGD VNSMGSRKGA AAVASMKGPS LQDALQKDAA ARQVGVTPTV NNPNLFKDLL G
001: MNPFSSGTRL RDMIRAIRAC KTAAEERAVV RKECADIRAL INEDDPHDRH RNLAKLMFIH MLGYPTHFGQ MECLKLIASP GFPEKRIGYL GLMLLLDERQ
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL
101: EVLMLVTNSL KQDLNHSNQY VVGLALCALG NICSAEMARD LAPEVERLIQ FRDPNIRKKA ALCSTRIIRK VPDLAENFVN AAASLLKEKH HGVLITGVQL
201: CYELCTINDE ALEYFRTKCT EGLIKTLRDI TNSAYQPEYD VAGITDPFLH IRLLRLLRVL GQGDADASDL MTDILAQVAT KTESNKNAGN AVLYECVETI
301: MAIEDTNSLR VLAINILGRF LSNRDNNIRY VALNMLMKAI TFDDQAVQRH RVTILECVKD PDASIRKRAL ELVTLLVNEN NVTQLTKELI DYLEISDEDF
401: KEDLSAKICF IVEKFSPEKL WYIDQMLKVL CEAGKFVKDD VWHALIVVIS NASELHGYTV RALYKSVLTY SEQETLVRVA VWCIGEYGDL LVNNVGMLGI
501: EDPITVTESD AVDVIEDAIT RHNSDSTTKA MALVALLKLS SRFPSISERI KDIIVKQKGS LLLEMQQRAI EYNSIVDRHK NIRSSLVDRM PVLDEATFNV
601: RRAGSFPASV STMAKPSVSL QNGVEKLPVA PLVDLLDLDS DDIMAAPSPS GTDFLQDLLG VDLGSSSAQY GATQAPKAGT DLLLDILSIG TPSPAQNSTS
701: SIGLLSIADV NNNPSIALDT LSSPAPPHVA TTSSTGMFDL LDGLSPSPSK EATNGPAYAP IVAYESSSLK IEFTFSKTPG NLQTTNVQAT FTNLSPNTFT
801: DFIFQAAVPK FLQLHLDPAS SNTLLASGSG AITQNLRVTN SQQGKKSLVM RMRIGYKLNG KDVLEEGQVS NFPRGL
Arabidopsis Description
GAMMA-ADRAP-1 complex subunit gamma-1 [Source:UniProtKB/Swiss-Prot;Acc:Q84K16]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.