Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G417200.1 | Wheat | cytosol | 96.88 | 97.9 |
| TraesCS3B01G457300.1 | Wheat | cytosol, nucleus, plastid | 96.88 | 97.9 |
| Zm00001d025314_P001 | Maize | cytosol | 15.58 | 93.17 |
| TraesCS3A01G421500.1 | Wheat | golgi | 98.23 | 91.49 |
| Os01t0916200-02 | Rice | plasma membrane | 76.43 | 87.41 |
| EES04102 | Sorghum | cytosol | 87.95 | 87.41 |
| Zm00001d012061_P005 | Maize | cytosol | 86.09 | 85.03 |
| Zm00001d042370_P003 | Maize | cytosol | 83.59 | 82.9 |
| CDY70074 | Canola | cytosol | 52.02 | 79.27 |
| Bra024739.1-P | Field mustard | cytosol | 21.6 | 79.09 |
| GSMUA_Achr8P08830_001 | Banana | cytosol | 66.25 | 77.43 |
| GSMUA_Achr11P... | Banana | cytosol | 69.37 | 71.75 |
| Bra023199.1-P | Field mustard | cytosol | 66.87 | 68.66 |
| AT1G31730.1 | Thale cress | cytosol | 66.67 | 68.44 |
| CDY42099 | Canola | cytosol | 66.15 | 67.48 |
| VIT_02s0087g00690.t01 | Wine grape | nucleus | 67.19 | 67.26 |
| CDX84997 | Canola | cytosol | 60.02 | 66.44 |
| KRH07767 | Soybean | nucleus | 67.29 | 66.06 |
| KRH07246 | Soybean | nucleus | 67.19 | 65.95 |
| Solyc08g075310.2.1 | Tomato | cytosol | 64.49 | 64.15 |
| KRH76456 | Soybean | nucleus | 64.28 | 64.08 |
| KRH39774 | Soybean | nucleus | 63.45 | 59.44 |
| PGSC0003DMT400004931 | Potato | nucleus | 18.59 | 43.03 |
| HORVU3Hr1G040310.1 | Barley | cytosol | 4.36 | 23.46 |
| HORVU7Hr1G050510.16 | Barley | cytosol | 3.74 | 21.95 |
| HORVU5Hr1G019420.1 | Barley | cytosol | 1.87 | 21.18 |
| HORVU1Hr1G048590.1 | Barley | cytosol, mitochondrion | 1.87 | 21.18 |
| HORVU3Hr1G053020.1 | Barley | cytosol | 1.77 | 20.0 |
| HORVU7Hr1G027050.3 | Barley | cytosol | 17.86 | 19.79 |
| HORVU6Hr1G087920.7 | Barley | mitochondrion | 17.24 | 16.55 |
| HORVU4Hr1G089310.1 | Barley | cytosol | 17.96 | 16.29 |
| HORVU1Hr1G054180.2 | Barley | cytosol, plastid | 15.37 | 15.61 |
Protein Annotations
| Gene3D:1.25.10.10 | MapMan:22.5.2.2.1 | UniProt:A0A287MBI6 | InterPro:AP4_complex_esu | InterPro:ARM-like | InterPro:ARM-type_fold |
| InterPro:Clathrin/coatomer_adapt-like_N | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005794 | GO:GO:0005829 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0009506 | GO:GO:0015031 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0030117 | GO:GO:0030124 |
| EnsemblPlantsGene:HORVU3Hr1G093320 | EnsemblPlants:HORVU3Hr1G093320.4 | InterPro:IPR011989 | PFAM:PF01602 | PIRSF:PIRSF037097 | PANTHER:PTHR22780 |
| PANTHER:PTHR22780:SF13 | SUPFAM:SSF48371 | UniParc:UPI000B485A9B | SEG:seg | : | : |
Description
AP-4 complex subunit epsilon [Source:UniProtKB/TrEMBL;Acc:A0A287MBI6]
Coordinates
chrchr3H:-:641882263..641889846
Molecular Weight (calculated)
104545.0 Da
IEP (calculated)
6.282
GRAVY (calculated)
-0.316
Length
963 amino acids
Sequence
(BLAST)
(BLAST)
001: ASPGGRTHAM EQLRTIGREL AMGSQGGWGQ SKEFLDLVKS IGEARSKAEE DRIISRELEH LKRRLADPDV PRRKMKELLL RLVYAEMLGH DASFGHIHAV
101: KMTHDESLPL KRTGYLAVAL FIDERHDLVI LVVNTIQKDL RSDNYLVVCA ALTAASRLIG EEAIPAVLPQ VVDLLAHPKE AVRKKAVMAL HRFYQRSPSS
201: VSHLVSNFRK RLCDNDPGVM GATLCPLYDL ILEDPNAYKD LVVSFVNILK QVAERRLPTS YDYHQMPAPF IQIKLLKILA VLGSGDKSAS GHMYTVLGDI
301: FRKGDTASNI GNAILYECIC CVSCIFPNSK MLDAAAETTS KFLKSDSHNL KYMGIDALGR LIKINADIAE QHQLAVIDCL EDPDDTLKRK TFELLYKMTK
401: STNVEVIVDR MIEYMISITD HHYKAEIASR CVELAEQFAP SNQWFIQTMN KVFEHAGDLV NIRVAHNLMR LIAEGFGEED EGADSQLRSS AVNSYLRILG
501: EPKLPSSFFQ IICWVLGEYG TADGKHPASY IIGKLCDVAE AHPTDDTVRG YAVSAILKIF AFEIAVGRKS DMLPEFQSLV DELSSSHSTD LQQRAYEVQA
601: LLGLDKQAVE SVMPIDASCE DIEVDRNLSF LNSYVQQALE NGATPYIPGS ERSGVVSVGN YRAQDQHETS AHALRFEAYE LPKPSLPTAT SQSSVSRPTT
701: DLVPVPEPSH YREDHHQTRS QPSGNAVSGE FGAKLRLDGV QKKWGRESYA SSSTPSSSAS SQQAANGGSN SDGGGLVTSQ ARESSYGSKT QPGTEVSAEK
801: QRLAASLFGS SAAKPNRKGH AGRKATKESS STEKAAPQPA KEQVTPAAPP PDLLDLGEEP VSSSAPSADP FSQLDGLLGP ASASPALAGT SAPSASNTPD
901: LMSIFSDDVQ TGATSASTEP AQKGATTKKG HSLQDALQKD ATARQVGVTP TGNNPNLFKD LLG
101: KMTHDESLPL KRTGYLAVAL FIDERHDLVI LVVNTIQKDL RSDNYLVVCA ALTAASRLIG EEAIPAVLPQ VVDLLAHPKE AVRKKAVMAL HRFYQRSPSS
201: VSHLVSNFRK RLCDNDPGVM GATLCPLYDL ILEDPNAYKD LVVSFVNILK QVAERRLPTS YDYHQMPAPF IQIKLLKILA VLGSGDKSAS GHMYTVLGDI
301: FRKGDTASNI GNAILYECIC CVSCIFPNSK MLDAAAETTS KFLKSDSHNL KYMGIDALGR LIKINADIAE QHQLAVIDCL EDPDDTLKRK TFELLYKMTK
401: STNVEVIVDR MIEYMISITD HHYKAEIASR CVELAEQFAP SNQWFIQTMN KVFEHAGDLV NIRVAHNLMR LIAEGFGEED EGADSQLRSS AVNSYLRILG
501: EPKLPSSFFQ IICWVLGEYG TADGKHPASY IIGKLCDVAE AHPTDDTVRG YAVSAILKIF AFEIAVGRKS DMLPEFQSLV DELSSSHSTD LQQRAYEVQA
601: LLGLDKQAVE SVMPIDASCE DIEVDRNLSF LNSYVQQALE NGATPYIPGS ERSGVVSVGN YRAQDQHETS AHALRFEAYE LPKPSLPTAT SQSSVSRPTT
701: DLVPVPEPSH YREDHHQTRS QPSGNAVSGE FGAKLRLDGV QKKWGRESYA SSSTPSSSAS SQQAANGGSN SDGGGLVTSQ ARESSYGSKT QPGTEVSAEK
801: QRLAASLFGS SAAKPNRKGH AGRKATKESS STEKAAPQPA KEQVTPAAPP PDLLDLGEEP VSSSAPSADP FSQLDGLLGP ASASPALAGT SAPSASNTPD
901: LMSIFSDDVQ TGATSASTEP AQKGATTKKG HSLQDALQKD ATARQVGVTP TGNNPNLFKD LLG
001: MEQLKTIGRE LAMGSQGGFG QSKEFLDLVK SIGEARSKAE EDRIVLSEVD ILKRRLLEPD IPKRKMKEYI IRLVYIEMLG HDASFGYIYA VKMTHDDNLL
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
101: LKRTGYLAVT LFLNEDHDLI ILIVNTIQKD LRSDNYLVVC AALNAICRLI NEETIPAVLP QVVELLNHQK EAVRKKAIMA LHRFHRKSPS SVSHLVSNFR
201: KRLCDNDPGV MGATLCPLFD LISEDVNSYK DLVSSFVSIL KQVTERRLPK SYDYHQMPAP FIQIKLLKIM ALLGSGDKNA SDIMSMVLGD LFRKCDSSTN
301: IGNAILYECI RCISCILPNP KLLEAAADAI SKFLKSDSHN LKYMGIDGLG RLIKISPDIA EQHQLAVIDC LEDPDDTLKR KTFELLYKMT KSSNVEVIVD
401: RMIDYMISIN DNHYKTEIAS RCVELAEQFA PSNQWFIQIM NKVFEHAGDL VNIKVAHNLM RLIAEGFGED DDDADSKLRL SAVESYLQLI SEPKLPSLFL
501: QVISWVLGEY GTADGKYSAS YISGKLCDVA DAYSSDETVK GYAVSALMKI YAFEIASGRK VDVLPECQSL IEELLASHST DLQQRAYELQ ALLALDARAV
601: ETILPLDASC EDIEVDKDLS FLNGYIQQAI ESGAQPYISE RERSGMFETT DYHPQDHHEV PTHALRFEAY ELPKPSVPPQ ASNELVPVPE PSYYSESHQP
701: ISTSLVSERE SSEIKLRLDG VKQKWGRPSY QSTTAASSTT PQAANGISTH SDAGVGSSSS KPRSSYEPKK PEIDPEKQRL AASLFGGSSS RTDKRSSSGG
801: HKPAKGTANK TATVPKENQT PVQPPPDLLD FGEPTATTAT AMDPFKELEG LMDSSSQDGG SSDVMGLYSD AAPVTTTTSV DSLLSELSDS SKGNSRTYQP
901: QTSKGPNTKE ALEKDALVRQ MGVNPTSQNP TLFKDLLG
Arabidopsis Description
AP-4 complex subunit epsilon [Source:UniProtKB/Swiss-Prot;Acc:Q8L7A9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.